Basic Information

Insect: Clanis bilineata
Gene Symbol: -
Assembly: GCA_036417725.1
Location: CM071138.1:655745-671198[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.1 75 4.6 3.4 3 23 763 783 761 783 0.95

2 8 5.1e-06 0.00035 21.4 1.8 2 23 788 809 787 809 0.96

3 8 0.00091 0.062 14.3 2.6 1 23 815 837 815 837 0.99

4 8 0.0071 0.48 11.5 2.1 2 21 844 863 843 868 0.93

5 8 1.7 1.1e+02 4.0 0.1 1 21 876 896 876 899 0.78

6 8 0.63 43 5.4 0.1 1 23 905 930 905 930 0.94

7 8 5e-06 0.00034 21.4 2.2 1 23 939 961 939 961 0.99

8 8 0.23 16 6.7 0.3 2 23 968 990 967 990 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.1	75	4.6	3.4	3	23	763	783	761	783	0.95
2	8	5.1e-06	0.00035	21.4	1.8	2	23	788	809	787	809	0.96
3	8	0.00091	0.062	14.3	2.6	1	23	815	837	815	837	0.99
4	8	0.0071	0.48	11.5	2.1	2	21	844	863	843	868	0.93
5	8	1.7	1.1e+02	4.0	0.1	1	21	876	896	876	899	0.78
6	8	0.63	43	5.4	0.1	1	23	905	930	905	930	0.94
7	8	5e-06	0.00034	21.4	2.2	1	23	939	961	939	961	0.99
8	8	0.23	16	6.7	0.3	2	23	968	990	967	990	0.91

Sequence Information

Coding Sequence: ATGCCCCGAGATCATGTCCTCAACCGACGACCTTCGATGATCCGCAGTAAGGCCTCTTCCTCTTATCTGTTGTTCGGAACAGTGCCACATCGGCGAGTGGGCGTTGCAGTCCACTCCGATGACCACGCGCCCCCCGCTCAAGTAGTTGAGCACCCGATAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCAGCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACGTTAGTAACACCACCTCCACGCTGCGTGTCGCGCGCGGGCGTGGCGGCGGACCACCTCGCGCGCGCGCACGGCTCGGCCGCGCACACGCACCTGTGCACGGTGTGCGGACACACTGACACAAGTCTAGGTCGCCTGCGGAATCACATGAAGAATCATTCGGAGCGACAGAAGTGCGAGTTGTGTGACAAGACGTTCAGGAACAAAGACTCGCTGCGGACGCATCTGTTCATCCACAGAGGCGAGAAAGAGTACCAGTGTCCCAAATGCGAGAAGAAGTTCCTGTTCAAACGCGCGCTTCACGTTCATATGATCACACACGATGCGCCCGCGTTACTCTACTGCCACGAGTGTGACATGAACTTCAAGAACCGCATGTCGTACGGACAGCACATGCGGTACAGCCTCAAGCACGTGGACCCGGCCAAACTCAAACACGCGTGCGCCGTCTGCGACAAGCGGTTCCTGAAGGCGGCGCGTCTGGAGGAACACAACATGGCGGTGCATCTGAAGGCGACGCCCTTCCGCTGCGCACTGCAGGGGTGTGACTTCGCGAGCTCGTCCCGCGCGGTGCTCCGGTCCCACGCGCGGCTCGTGCACCGCGGGGGGCGCGCGCGCAGGAACTACGTGTGCCACACGTGCGGGAAGGCGTACAAGAACAAGAAGACGCTGGAGGGTCACCTGCGGTCCCACTCGGGTGAGAGACCGCTGCGCTGTGAACATTGTCCCGCCACGTTCGGATACGACGCCGCGCTCTACAACCACAACAAGCTCGTGCATCTCAACCGTAAGATCCGATCGTCCCGTCCGTCTGCACCAGAAGAAACTTAG
Protein Sequence: MPRDHVLNRRPSMIRSKASSSYLLFGTVPHRRVGVAVHSDDHAPPAQVVEHPITPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPAPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTLVTPPPRCVSRAGVAADHLARAHGSAAHTHLCTVCGHTDTSLGRLRNHMKNHSERQKCELCDKTFRNKDSLRTHLFIHRGEKEYQCPKCEKKFLFKRALHVHMITHDAPALLYCHECDMNFKNRMSYGQHMRYSLKHVDPAKLKHACAVCDKRFLKAARLEEHNMAVHLKATPFRCALQGCDFASSSRAVLRSHARLVHRGGRARRNYVCHTCGKAYKNKKTLEGHLRSHSGERPLRCEHCPATFGYDAALYNHNKLVHLNRKIRSSRPSAPEET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -