Cbil006976.1
Basic Information
- Insect
- Clanis bilineata
- Gene Symbol
- -
- Assembly
- GCA_036417725.1
- Location
- CM071145.1:2166652-2176453[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.37 25 6.1 0.2 2 21 1594 1613 1593 1614 0.87 2 7 7e-05 0.0048 17.8 0.7 2 23 1720 1741 1719 1741 0.95 3 7 0.0046 0.32 12.1 2.6 2 23 1761 1782 1760 1782 0.95 4 7 0.0061 0.41 11.7 4.2 1 23 1820 1842 1820 1842 0.98 5 7 0.0017 0.12 13.5 1.4 2 23 1866 1887 1866 1887 0.95 6 7 0.018 1.2 10.2 0.5 1 19 1911 1929 1911 1931 0.96 7 7 0.58 40 5.5 0.6 5 23 2278 2297 2275 2297 0.90
Sequence Information
- Coding Sequence
- ATGGATAGGTTGAATCAGTTGCGCGGTGCGGCGGGGGGCTCCGGCGACTCGACGCTCGACACCACCTCTCCGCCCAGCGAAGCCTTCATCACCGCCAACGAGAGCTCCTCCAAATATTTTTCCCTCTCAGAAGTGGACTCGACGTTTGATATATCGCCCATAAAGGATGTGTCACtggcctccgccagcgccgatCCCGAGAGGACCATCACAGATTCCGACGAGTTGATATCGAACCTGTCACCCATTAGTAAGAAAAGTGATATATTAGATAGTTACAAGATCGGTAAGCAAATTGAAGCGGCAAACATTCTGTCAGGTGGTGTGGACATTTTTGACGACAATGAGAACTCTTATGATGGTGATGAGCTGGTTATTGACGATAATGTTGAAATTGACGAGAAATCCAATCCGGAATTGAAGCAGAGTGAACAGGTTGAGTTTAAGAGTGATGATAATTTGACAGAGTCCACACTGATGGATGTTGAGACGGATCTAGCTAGTAAAGATACAGAAGTGGTGCTACAGATTGATGGTAAAAATGTTGACGCTATAAATATCGGCAACGGGTTGTATTTGTACAGAAAGGAGGGTCAGGAGGAACTAGCCGCTGTACAGATAATCGATGATGATCAACATCAGCCCAGTTTCAAGTTCCTCAAAGTTCGCGAAAACACTGAGGGAAATCTAGAAGTTTATGAAGAGATAGAAATAGAAGTACCAAAAGAAGTGCCTGTGAAAGAAGGGAGATCAATAGAAAAGAACACATCACATGTGCCTATTACagatataaataaagtaataaatgagCCATCTAACAACAAAACTGTTGATAAGAAAACTAAAACTCCACAAAAAGAAACAGCATTAACTTCAAGTGAAGTCGAAAATGATGATAAAGATGCATCAGAGTCCAAAACTGAAGTAAATTTAAATGGAAAAATGATGAAATTCAGTGAATCACGCAAATCGCCGGTTATTGGTACTTTTACGCCCATGACATATCACTCAACACCAAACAAAGAGGGGATACCACTTACAAAAACCATGGTTGACATGCAATTGCAGCCAAGCAGGCATTCAGATAATGTTAAAAAGACTATTGAGGTCCACACTGATAGCTGCAAACAGAAACTTAATGACACAAGTAAAAGTAGAGATTTAAGTGAAGATTTGAAAGAAACAGATATTACTATCACAGAAAAAGAAGATATTCACAAAGAAGACAATGATTCAAAAAGTCAAGAAACTGAAGCAACAGAAAATGTATCAAACaagactgatatggaaataatAGACGAAAATGATTCAAATGGTAAGCAGGAAACCCCTGAAGCAATAATAACGGAAAGTGTTCCAGAAAGTATTGaagtaaaaaatgaaaatgaagaCAGCATAGCTCTTATAATGAATGATATGCCTAAGGATAACGTAATTACTCCAATCAGTGGTGCATCTGAAGAAAATAATGCTAATAGAAATACCTTGGAGAAAATAGAAACTAAAACTTCACAATCAGTAGATGGAGTAAAAATTAAAGGAGATAGTAAAGATCCCGATGTTGATAAAGCAGATGTTGCAAAAATCGCGGTTTgtaatgaaaatgaaattaaaattaataagaaaaCATTTAAAGTGGAAGCAGGTAAAGCGCTTATGACATCAACAGTAGAAAACAAATCAAGTGTTTCAAAGGGGAATGAAGAACAAGTTCCATTAGTAAAAAACGACGATATATTGCCTGCAGAAGCTGTTTCAcaaaaaattgtgaaaaaagACAACTCGATCGATATtacaaatgaaaataaagaaCAAGGCGCTTTGACAAGTAACTCAATAGTAGCTACAGATTGTCCCATTATAGATCTATCAGATGGTATGAAGAAAGAACTCATTCCAGAAAAGCTTACTAAAAGTTCCAATGATGATGAAGGTAAAGTCATTATTGTTAGTCATATTGAAGAAATAGAAGATGAAAAATCTATGGATGACGAAAATGATTCTATAAAGAAATATGAACCAGAGATGCAACAAAATACAATTTGTGATAAAGTAGAGGAAAAGAAAGTTGGGGAAATAACCATTATACCAAAACTCAATGATGCATccgaaaacataaaaatatgtgagACAAAACTGGTGGATGATGTTAAACCAACCACTAAGTTACTTGAAGAAAATAAACTTCTAAATATAAATACTGAAACTCAAGTTAAAGatgttgataaaaataaaatgacagGACATAATATTAGCGAAATATTTCCAGTCACTAAACAAATTGACTCTgctaataaagaaaaacaaaaagataATGACACGAATGACactaaaatacaaatacatagTAAGGCGATCGAGCGCTATGAAGCAGGTCGTTCAAACATTACCGTTCAAAAAATTTTAACAGTTAATAAAACAGAAGGAAATAAGGTGCCTTGTGATGGTAGTGAGTTAACTGGTGCTGGCAATAAATCAGATCTGATATTAAAAACTGAGAACACGAAAAATAGTAATACCAAGCCAAGCACTGTTAAGATGGAGATTACTTCAACTAAAACAGTTCCAACTATCAGTAATAAAGAAATTTCTAAAGTGAACGTCCGTGTAGATCCAAAACCATCAAACAATAATAATGCTGCTGTCCCTTTCGGCAAATGGACTGAAGCGAACAGACAGGAgttcttaaacaaaataaaagaaacCAAAGTGCCTGTGAATATTTCCAATAGCAAACCGATAAAAAATTCTAATGACTTAAATCGACGCGACGTTTTAAAGAAAATTGATAGTCAACGACAGTCTAATAATGCGGCATTAAAAGCTCAGGAATCTAGCAAAATCAACATAAAGAATGAAAAAGTATTCACTAACAAACCTGTTGTAGCAGATCAAGATACTGTGGTGCAACATGTTAGTCAAGATAGTAAAATTCCCGTAAAAGTAGAAGCAACtgaaataaaaactaaagcaaTAGTTGTTAACAAAAAAACAGCTAAGCTAGAAATTTCAAGTAAAGCTGCAGATAAGCTAACAATGACTACAAGCACAGTTACAGGAGCTACTAAAAAAGGAGTAATGCAGAGGAAAGCAGTTAATACTCAAGACTTGATAGATAAAACTGTTGAGGGTATTATCAATAAAGGGTTTCCACCCAAAACACACACAACAGAGGTTAAATCTAATTCATCTAAAGATTCTAATGTACAGAAAAGTGTAGATTTATACCCAAGTCAGCCTAGTACAGTTCCGCCTACTACATTAGATGCGATTGAGATGAAAATGAATGAACTGCATGGAATTCCATTCATTGAGAGACCTCCGCACGAGTTGCCTCGGCCAAGCAACCCGCCGTTTAATAACTATAACAAATTGGATAAAGAGAAACCCACAGAAAATAAACCAGCAAAAATACCGAGCCTTTTACCTTTTTCATGTAAAAATGCCTCGAAAGTGAAAGAAAATGTCGTTGATATTGATTCTGAAGAAGAGATAATAGAACATGAACCTGTTACGGGAGATATAGAGATGACAAAAAAGGAACTTCCATCTAATCTTCATCTAAAAGAAAAAGTGCTAACAGTTGATACAGCCAAAATCAGTGCCGAAACTACTAAAAAGGAGACCATAATAACAGAAAACGATTTCGATAAATTTGCTCGGAGGAATTCGGTCACATACGAAAACTGTATTACAGTGAAATTCGATGGAAAGGAACAACATAACGTCGTTCAGACAGTGGtagaaaaagatgttttaaaAGCACAACCTAAAAATGATGTGTTGTGTATGGAAATAAAGCCAAAACTGGCGCAAAAATCTCAATCATTATgccaaaatattaatcaaattaaaCTTCAACCTCCGCCAAACACGACATCCGTAAATGAAGACACATCTAATACGAATTATCAGTCCAAGCTCCAAATCGCTTACCAATCAGCAATAAATGCGAAACGCCATAAAGAAGGCCCAATAACTGTAATTGAGGATAAACCAGTTAAAGTGGTGTACGTAGATGCGAATCCTGAGTTTATTCCAGGTAAATTGAATGTACAAGGTCAAAATTTATCACCTGTCAAACATCCAGTTTTAGACATGGAAAGCAGTCACACAAACGAATCATTAGAATTGGAAATGATGGACTGTACAGACGATAGTAAGTTACAAGACGAATCAAAACCTAAATCTAAACATCAGAGAAAACAAGTTTTAACGCCAGTTGAGACACCTGAATTAGAATTGATAGAGCCTAGTGACTTAGGCATTGAGGTTTCTCCCAAAAAGAAAAGGAAAACCGAGGACACCCGAACTGATAAGAACTCAAAAAATGTTATTCACAAAAAATCATATTTACTGGGGCGTAGTCCAATAGTAGAAGATAACGTTACTAATCTTGTGGAAGTTACGAAAAGTCCTGCAAAGGACTCTGCCCATAGAAATGAAGAAGTAGGGATTAAAGACACCGTCACAGCTATAGATAATTTAGTCAAAGCTGCTGAGCTTTTAGAAAATCAATCGGAATCTATGAATACAAGTACCGAACCCACCCCTGATAGTCAGGCAAGTACGCCAGTTAAAAGGGGAAGAGGTCGACCAAGAAAATATCCACTGCCTGAAGGAGCTGTAGATAAAGTTAAAGTCCCCAGTCCTCACAAGAAACCACGATTAATAGACGCTAAACCAGCCAAACGTGATACGACAACAGAAGAAGAAGAGACTTCTGATGAAGAAATCGTAAAAGAGAATTGGACAATgggaaaaataaatgaaaatattgtgTGTCCTATTTGCAATAAACTATTTAGATCTGAAAATgttgttttcaagcatgtgaaACACTGCACAGGCCCGTCACCAAACCGGTCAGATGCAGACAAACGAAGCCCAAGACGACCCAGACAATCACAAGAGTCCGACTCCAAGTCTGAGGACATGGATATTGATGAAGAAATATCAAaagacattaaaaaatatactacgAAGAAACGTAGATCCAAAGATTCCAGTGAAAAGTCAGATTCAGATAAAGAAGACATTATTGTTATCGAAGATACTCCTGTtaaagaaaaagtaaaaaatgatGATGACAAAAAACATCATGGGTCTAGAAAATTGGTGAAGACCAAGATTCATAACAGAATAGTTAACAATCTTGTATGTGAATTCTGTGGCAAAACATTCAGACAACTGTCATACTTAGCAAATCACAAACTACAACATAAAAAAGAAGAAGCTAAGAAACGTGAAAAGGATGTTCAAGTTTCcaaatctattttaatttgcgaCGTTTGTAAAAAAGAGTTTAGAAAACTGCATCATCTGGTGCAACATCGGGCTATTCACAATCCGCAGTCGGTTTCTTCTCGTATGTCTAGAAAAAGTTCATCGGAGCAAGAAGAAACTAAATCTGAAAAGGAAGAGACTATGAAACAAACTGAGGATCCAAGTGCCGGGTTCAGGTGTGAACCATGTGACAAATCATTCAGGAAGTTACACCATTTAGTTGAGCACAGAGAGACCCATGGTGGAATTAACAGACAGAAGAATGCTACCACTGTGCAGACGGTAGTTGAAAAACCAACGCAACCGCCACAATgtgaaatatgtaaaaaaactttCCGGAAGCTTAATCAACTAATAGAGCACAAAGAGCAACATCTTGAAACCAGCTCTGAAAAATCTGATGACAAAAGTGTTAAAAGTTCTCTGTCCACAAAGGATATTATACACGAATGTCCACTCTGTTATATGGTGTTCCCTAATGAACATTCTCTGAACAAACATTCGGTTATATGTCAAAGAAAAAAACGGCAATCGAAACAACCGAAACCTGTTGTGGATGAAGATGGCGATACCCTGGAAATGGACGATAATGCAAAGTCAGACGAAAATAAACTAGAAGATAATGATGAACCGGAAATCATCGCTGAAGAAGCCAAAGTTATAATAGTGGAGAAAAACGTCGAGTTAGAAACGGTTCATGTGCCAATGTCTGCCGTAAACGAagatattgtaataattgaaaAACCTCCTCCAGATGGTGAGACGATTAAACACCAAGAATCACCAAAAGTCGACACTGAAGTCgaaaaatctaataataattCCACCACCAAAGCATCGATAACTTCTGAAATTCCAGAAGCCAAAACGAAGATTGAGCAAAAGAAAGAAGAGGAAATCCAAGATGTGCCTAAAAAGAAAATATCTGCGAAAAGTAAGGCGACACCGACTGTGACTAAGCGGCAAAGGATAAGTGCCCCGGCCCCTATAGATATAGACAAATCTCCTGTGGAGAcgagtgatgatgatgaagtgcgGTACATGCTTAATCCTAATTTGGTAGTAGACGAATCGACAGAAGGCAAGGTATTCATGAAGGTTCGAGCTAAAAAACGGAATTCGCTTCAGATCGAACGGCCCAACTCTAAAGATTTAATCAAGAGAAGAACGTCTCTACAGCACCCGCCTAAAATACCGCGCCTTAAGCCAAAGCCGATAGAAATTAAAGTGACAGCACCTGttttgaaaaatgttgcaaaaacgcCTAAGTTAGAGCCGGTTCCTTCCACAGACTCGGATGACAGTGACGTGAAATACTCTTTCCCCAAAACCACACCGGAGAGGACAATACTCAGAGAACGCCCGTCTAGAGAGATGGAGAAAAAACCGCCAAGAAAGTCTTTAGcggaaaaaagaaaaacattaagcGGTATTGCCAAACGAAAATCATTGGGCAAGACCGCCACTGTTCGGTATAAAGAAGCAAAAACAACCTCACCGCCTAAACAAGTTAAAAGACGCACGGCGGAGGCGGAGCACCGCTGTGACTGCGGCGAGTTGTTCAGCAGCGCCGCGCTGCTCTCGAGACACACCACGCTCGCGCACACGCCGCCCAGGATACGCAGGCGCAGGTCGCCGCCGCCCGACACCACCGCCgctaccaccaccaccaccaccaccaccaccaccaagCAGACCCTCGCATCACGGAAGTCCAGCGTCAGGAGCGACACTACCGCTTCCAACGCGAAGACGACCGTAGCCACTAGAAAGTCGACCGGCAAGAACGATGCCAAACCGGACACTCGCAAGTCGATAAAACCCGTCGTAAAGGTCGAGCTTAAGAACGCCAATAGTGCGAATATAAAAAACAGAAGAAGCATCTCGACCAGGATGACGGCGGTATCGGATAAGGCGAAGAAACCGACGCAGAAATCGAAAATTTGA
- Protein Sequence
- MDRLNQLRGAAGGSGDSTLDTTSPPSEAFITANESSSKYFSLSEVDSTFDISPIKDVSLASASADPERTITDSDELISNLSPISKKSDILDSYKIGKQIEAANILSGGVDIFDDNENSYDGDELVIDDNVEIDEKSNPELKQSEQVEFKSDDNLTESTLMDVETDLASKDTEVVLQIDGKNVDAINIGNGLYLYRKEGQEELAAVQIIDDDQHQPSFKFLKVRENTEGNLEVYEEIEIEVPKEVPVKEGRSIEKNTSHVPITDINKVINEPSNNKTVDKKTKTPQKETALTSSEVENDDKDASESKTEVNLNGKMMKFSESRKSPVIGTFTPMTYHSTPNKEGIPLTKTMVDMQLQPSRHSDNVKKTIEVHTDSCKQKLNDTSKSRDLSEDLKETDITITEKEDIHKEDNDSKSQETEATENVSNKTDMEIIDENDSNGKQETPEAIITESVPESIEVKNENEDSIALIMNDMPKDNVITPISGASEENNANRNTLEKIETKTSQSVDGVKIKGDSKDPDVDKADVAKIAVCNENEIKINKKTFKVEAGKALMTSTVENKSSVSKGNEEQVPLVKNDDILPAEAVSQKIVKKDNSIDITNENKEQGALTSNSIVATDCPIIDLSDGMKKELIPEKLTKSSNDDEGKVIIVSHIEEIEDEKSMDDENDSIKKYEPEMQQNTICDKVEEKKVGEITIIPKLNDASENIKICETKLVDDVKPTTKLLEENKLLNINTETQVKDVDKNKMTGHNISEIFPVTKQIDSANKEKQKDNDTNDTKIQIHSKAIERYEAGRSNITVQKILTVNKTEGNKVPCDGSELTGAGNKSDLILKTENTKNSNTKPSTVKMEITSTKTVPTISNKEISKVNVRVDPKPSNNNNAAVPFGKWTEANRQEFLNKIKETKVPVNISNSKPIKNSNDLNRRDVLKKIDSQRQSNNAALKAQESSKINIKNEKVFTNKPVVADQDTVVQHVSQDSKIPVKVEATEIKTKAIVVNKKTAKLEISSKAADKLTMTTSTVTGATKKGVMQRKAVNTQDLIDKTVEGIINKGFPPKTHTTEVKSNSSKDSNVQKSVDLYPSQPSTVPPTTLDAIEMKMNELHGIPFIERPPHELPRPSNPPFNNYNKLDKEKPTENKPAKIPSLLPFSCKNASKVKENVVDIDSEEEIIEHEPVTGDIEMTKKELPSNLHLKEKVLTVDTAKISAETTKKETIITENDFDKFARRNSVTYENCITVKFDGKEQHNVVQTVVEKDVLKAQPKNDVLCMEIKPKLAQKSQSLCQNINQIKLQPPPNTTSVNEDTSNTNYQSKLQIAYQSAINAKRHKEGPITVIEDKPVKVVYVDANPEFIPGKLNVQGQNLSPVKHPVLDMESSHTNESLELEMMDCTDDSKLQDESKPKSKHQRKQVLTPVETPELELIEPSDLGIEVSPKKKRKTEDTRTDKNSKNVIHKKSYLLGRSPIVEDNVTNLVEVTKSPAKDSAHRNEEVGIKDTVTAIDNLVKAAELLENQSESMNTSTEPTPDSQASTPVKRGRGRPRKYPLPEGAVDKVKVPSPHKKPRLIDAKPAKRDTTTEEEETSDEEIVKENWTMGKINENIVCPICNKLFRSENVVFKHVKHCTGPSPNRSDADKRSPRRPRQSQESDSKSEDMDIDEEISKDIKKYTTKKRRSKDSSEKSDSDKEDIIVIEDTPVKEKVKNDDDKKHHGSRKLVKTKIHNRIVNNLVCEFCGKTFRQLSYLANHKLQHKKEEAKKREKDVQVSKSILICDVCKKEFRKLHHLVQHRAIHNPQSVSSRMSRKSSSEQEETKSEKEETMKQTEDPSAGFRCEPCDKSFRKLHHLVEHRETHGGINRQKNATTVQTVVEKPTQPPQCEICKKTFRKLNQLIEHKEQHLETSSEKSDDKSVKSSLSTKDIIHECPLCYMVFPNEHSLNKHSVICQRKKRQSKQPKPVVDEDGDTLEMDDNAKSDENKLEDNDEPEIIAEEAKVIIVEKNVELETVHVPMSAVNEDIVIIEKPPPDGETIKHQESPKVDTEVEKSNNNSTTKASITSEIPEAKTKIEQKKEEEIQDVPKKKISAKSKATPTVTKRQRISAPAPIDIDKSPVETSDDDEVRYMLNPNLVVDESTEGKVFMKVRAKKRNSLQIERPNSKDLIKRRTSLQHPPKIPRLKPKPIEIKVTAPVLKNVAKTPKLEPVPSTDSDDSDVKYSFPKTTPERTILRERPSREMEKKPPRKSLAEKRKTLSGIAKRKSLGKTATVRYKEAKTTSPPKQVKRRTAEAEHRCDCGELFSSAALLSRHTTLAHTPPRIRRRRSPPPDTTAATTTTTTTTTTKQTLASRKSSVRSDTTASNAKTTVATRKSTGKNDAKPDTRKSIKPVVKVELKNANSANIKNRRSISTRMTAVSDKAKKPTQKSKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -