Basic Information

Insect: Clanis bilineata
Gene Symbol: RREB1
Assembly: GCA_036417725.1
Location: CM071156.1:5902475-5907522[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.095 6.4 8.0 0.5 1 23 83 106 83 106 0.94

2 12 0.49 33 5.7 0.7 1 22 140 161 140 165 0.92

3 12 0.023 1.6 9.9 0.1 1 23 282 304 282 304 0.97

4 12 0.0012 0.084 13.9 0.4 1 23 313 335 313 335 0.99

5 12 0.00077 0.052 14.6 2.0 1 23 341 364 341 364 0.97

6 12 0.0031 0.21 12.6 1.7 1 23 696 719 696 719 0.96

7 12 0.00026 0.018 16.0 1.3 2 23 911 932 910 932 0.97

8 12 0.026 1.8 9.7 5.3 1 23 938 961 938 961 0.97

9 12 0.079 5.4 8.2 2.0 1 23 994 1018 994 1018 0.94

10 12 0.052 3.6 8.8 0.1 1 21 1040 1060 1040 1063 0.89

11 12 0.0019 0.13 13.3 0.2 2 23 1103 1124 1102 1124 0.96

12 12 0.018 1.2 10.3 5.0 1 23 1130 1152 1130 1152 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.095	6.4	8.0	0.5	1	23	83	106	83	106	0.94
2	12	0.49	33	5.7	0.7	1	22	140	161	140	165	0.92
3	12	0.023	1.6	9.9	0.1	1	23	282	304	282	304	0.97
4	12	0.0012	0.084	13.9	0.4	1	23	313	335	313	335	0.99
5	12	0.00077	0.052	14.6	2.0	1	23	341	364	341	364	0.97
6	12	0.0031	0.21	12.6	1.7	1	23	696	719	696	719	0.96
7	12	0.00026	0.018	16.0	1.3	2	23	911	932	910	932	0.97
8	12	0.026	1.8	9.7	5.3	1	23	938	961	938	961	0.97
9	12	0.079	5.4	8.2	2.0	1	23	994	1018	994	1018	0.94
10	12	0.052	3.6	8.8	0.1	1	21	1040	1060	1040	1063	0.89
11	12	0.0019	0.13	13.3	0.2	2	23	1103	1124	1102	1124	0.96
12	12	0.018	1.2	10.3	5.0	1	23	1130	1152	1130	1152	0.97

Sequence Information

Coding Sequence: ATGTTCGTAATCAATTGTAACATGTACTCTTTTGTTACAGAAATCAAAACAGAGGACATCAGCGAGGCGAAAATCGACGCCGAGGAAATGGATCAACTGGGTATTGAACAGGAGTCGCGCGTTCGAACCACCAGTATAGACAGCGACAACAGGTCCGATAGGAGCGAGGAAGAAGACAGGCGGGCGCGTAAAAGGGCTGCCTCGTCCTCTCCTTCTTCGTTCCCGATGGACAAGAGAATCGCGCGCTTCGAGTGCCCCAAGTGCAGGCAACGGTTCGACTCCGTCAACGCGTACGACGTCCATCGTTTCACGGCCCACGGCGAAAACCACAGGTCGGCCTACGACATCAACTACGAATTCGCCACCAAACGAGTTCCAGAAATCATGAGGAACTCCCAAATGATGCCGGAGCAGCGCTACCGTTGCGACTCCTGCTCCAGGGAATTCCCGACCGTTCCAGCATTggacatacacaaaaaaacttGCTCAGCTCATGTTGCAAGTACAGAATGTATCAGAAGGGATGACTTCTTTGAAAAACTAGATCTTAGAAACAGGTCGTTCGCGGCGTTAACTCCACCCATGGATAGATTCCCACCTAAATTCGAAGATGGACATCTTACTACAAACGGCATACGTCATATTGATTCCGCTCGTGATTTAGCTGATATTAAGTCAATATTAAACGTAACTTCGACTGGCGGCCTTTTAGAAAGATTGACTAGAGTTCCCTTAGAAAGTAGTGTACTTACACCTCCAGATACCATTATTAAGGAAAGAGAGCCAGAAGAGACTCAAGATAATTTCGCAGCCGAATTCAGAAGGATGAAGTTACGTGGAGAGTTCCCTTGCAGGTTATGCCCAGCTAAGTTCCCTAATCTCAGAGCTTTAAAGGGACACAACAGAGTACATCTTAGCGGGACTGGACCCGGCCCTTATCAATGCAACATGTGCCCTCACGCCTCGCTCGATAAAGCGGCCCTTGTAAGGCATATGCGCACGCACAACGGAGACCGACCATATGAATGTGCTGTCTGCAATTACGCGTTTACCACCAAAGCCAACTGTGAAAGACATTTGAGGAACCGACATGCTAAAGTGACCCGAGAAGATGTCAAGCGTTCGATTATTTACCATCCATCGGAAGATCCAAACAATGACGAAGTCAACTCTAAGCTCGCTCGGGAAGAAGTGAAGAGGTCATTAGTATTTCCCACGCCTGAAATCGAAAGACGGAACGATACTGGTCGCGATACACCTCTCACTCACTTCGCTCCAAGCTTCATTACTGACAGGCATCCAGTGACTGCACTGGCGACTAAATCAATAATTGAAAGCCCCTTAACTCCTAGAGAGCCAGATCAGCCTGTACCAAGAATTAAGGTGAAGGGCATTGGACAGCTGACGCAAATACCAGAATTTAGACCACCAGAAATAACATACAAGCCCAGCGAAGTCCAGTCAGATACGTACGATGAAGAAGCCCCAGTTGATTTGAGTACGAGCGATAATAACAGTTGCGATGTCTTAGATTTAAGTAAAAAGAAACGTGATACTGACGAAGAGCCTAAAGCGCCGCCGCGGCCTTCATTTGAACCAGAACCACAGAATGAGGCAGCGTCAGAATTTGAAAAGGCAAGACTCTTACTAGCTCAACAAAGACTTTTCGAAACTTCCTTTCCAAAAATAGCTAACCCTGCTTATTATGCCTCGCATCTTTCTCAACTATATCCAGGACTGCCGGGACTCCCGCTCCCACCGTCCTTTCCTTACTTTCTTCTACAGTCGTTTTTTCCTAACCCAACTGATTCACAAGAACTTGCCGAAGTAAAACAACGCATACAAAGCATGTCTGGAGGGAGGCTAATTCCTAACGAACAAGAAGTTCAAACAAAGCAGGAGTCAGAAGAAGAAGAGGTAAAACCTGTGCCACTGTCAATATCACCTGCACTGTCTCCGCATACCGAATCTCCGCGGCCATTGAGCAGCAATCTTATACCACAGACTGATTCTGTGaagctggtcataaaaaacgGTGTACTTATGCCCAAACAAAAACAAAGACGTTACCGTACTGAAAGACCATTCTCCTGCTCTCAATGTACGGCGAGATTTACTCTCCGTTCGAATATGGAACGTCATGTGAAACAACAGCATCCTCAGCACTGGAGTGTTAGGAGACCAGCGCCGCGAGCCCCTCCGCCGTATCCTACACCCGACTCTCTGCCAGGCCATGTTAAGATGGCTCTCTTAGCCCGCCATCTTGAACGCCCATTACAACAATCTGAACGTTCACCAGTCCGTCGTGACTCTGACGAAGTAGCTGACAACGAGGAAGATGAAGACGACACTTTAATCATTGATGAAGACATTAAGCCTGAAGATCACACAGCGGCTCGTAGAGCAGCTGCTGAAATATTAATGGCGACTCGTCAACAAGAAATGAACAAGGATTTCGACCTTAAAATCGCAGGGAATTTGATAAATAAACCCATTCCGATTCCGGCGGATAAGATCGAAACTGGGACTGACCCTATGCCAATGGCTGGTCAAGAGCCAGTGTCGGTACCTGTGGTACCTGCACGCAGTGACGAGGAGGAAGATGAGGAGGGTTTAGTGGCATCCACCAGCGAAGGGAACAATTCAGGAAGTGATGAAAATAAGTCAGAATCGGACACCACACAGCCACCAAAGAAGAAATCTGCGTACAGCCTGGCACCAAACCGCGTATCCTGTCCGTACTGCCACCGAAAGTTCCCGTGGTCTTCATCGCTTCGTCGCCACGTCTTAACGCACACCGGGCAGAAGCCGTTCAAATGTCCTCACTGCCCGTTGCTATTCACCACAAAATCCAACTGCGACCGCCATTTATTGAGAAAGCATGGTGGATCCGCTAGAGCGATACTGGCTGAGCCGATTGCTGATGCAATGTCGCCTCCTCAACCAGTGAATGATGCTCGAAGTGTTCCTGAGAGGCCGTATAAGTGTACCTCATGCCCCACCAGCACTTTCTCCTCAATGGAAACGTTAAAGAAACACATGTCTTCACGACATTCTGACTCCCAGCCGGGGTCTCCGAACCCTGAGGTAGACGATCCCTCAGACTGCGGTCTGGTGTTCAAGTGCCATTTGTGCGAGGCTTCGTTTGGGGATAGAAGTGCTGCGTTGGCTCACTTGGGGGCAGCACATGCGACGGAGTATGAGCAGCTGGTGAACAAGGGCGCGTTGGATGCTGCCAGCGACCGCAGTGAGagcgctgatgatgatgacagggGCAAGTTCCCAGATCACGCTAATAGAAAGGTTGTCTGCGCCTTCTGCGTCCGTCGTTTCTGGTCTGCTGAGGACTTGCGCCGGCACATGCGCACTCACTCAGGCGAGAGGCCGTTCGCATGCGACTTGTGCACCCGACGGTTCACTCTCAAGCACAGCATGCTGCGCCATCGCAAGAAGCACAGGGAGGAGGTCACTGATGATGAGGAACCTTCGCCTCCTAATACACCTTTAGAAGGACATAACGTTACTAATGGATACCGATACCAAGATGACGACGGCTCCGGCAACGAGATCCCGAGCAACGTCAACAACAACAACTCCCCACCGTCCGCGCCGTACGAGAACAAACTCAAACTGGACATGATGTCGCGAAAATACTCCTCCGAGGCCGAAAACGACGGCGAAAACGGCACCGACCTCATCGGGAAACTACTGGGGATCCCCGACAAGACCATAAACAAGCTGCTCTCATCCGCAGACGAGGCCGCGAAGATCCTCGGCGTCAACAAATGA
Protein Sequence: MFVINCNMYSFVTEIKTEDISEAKIDAEEMDQLGIEQESRVRTTSIDSDNRSDRSEEEDRRARKRAASSSPSSFPMDKRIARFECPKCRQRFDSVNAYDVHRFTAHGENHRSAYDINYEFATKRVPEIMRNSQMMPEQRYRCDSCSREFPTVPALDIHKKTCSAHVASTECIRRDDFFEKLDLRNRSFAALTPPMDRFPPKFEDGHLTTNGIRHIDSARDLADIKSILNVTSTGGLLERLTRVPLESSVLTPPDTIIKEREPEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLAREEVKRSLVFPTPEIERRNDTGRDTPLTHFAPSFITDRHPVTALATKSIIESPLTPREPDQPVPRIKVKGIGQLTQIPEFRPPEITYKPSEVQSDTYDEEAPVDLSTSDNNSCDVLDLSKKKRDTDEEPKAPPRPSFEPEPQNEAASEFEKARLLLAQQRLFETSFPKIANPAYYASHLSQLYPGLPGLPLPPSFPYFLLQSFFPNPTDSQELAEVKQRIQSMSGGRLIPNEQEVQTKQESEEEEVKPVPLSISPALSPHTESPRPLSSNLIPQTDSVKLVIKNGVLMPKQKQRRYRTERPFSCSQCTARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTPDSLPGHVKMALLARHLERPLQQSERSPVRRDSDEVADNEEDEDDTLIIDEDIKPEDHTAARRAAAEILMATRQQEMNKDFDLKIAGNLINKPIPIPADKIETGTDPMPMAGQEPVSVPVVPARSDEEEDEEGLVASTSEGNNSGSDENKSESDTTQPPKKKSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILAEPIADAMSPPQPVNDARSVPERPYKCTSCPTSTFSSMETLKKHMSSRHSDSQPGSPNPEVDDPSDCGLVFKCHLCEASFGDRSAALAHLGAAHATEYEQLVNKGALDAASDRSESADDDDRGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCTRRFTLKHSMLRHRKKHREEVTDDEEPSPPNTPLEGHNVTNGYRYQDDDGSGNEIPSNVNNNNSPPSAPYENKLKLDMMSRKYSSEAENDGENGTDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01010754;
90% Identity: iTF_00063947;
80% Identity: -