Cbil019417.1
Basic Information
- Insect
- Clanis bilineata
- Gene Symbol
- ZNF131
- Assembly
- GCA_036417725.1
- Location
- CM071159.1:2901912-2912932[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.0026 0.17 12.9 2.7 1 23 270 292 270 292 0.99 2 11 0.1 7 7.9 2.9 1 23 299 322 299 322 0.93 3 11 5.2e-05 0.0035 18.2 0.2 1 23 353 376 353 376 0.97 4 11 1.1 73 4.6 0.8 2 17 381 396 380 405 0.81 5 11 0.024 1.6 9.8 0.2 2 19 414 431 414 433 0.95 6 11 3.3e-05 0.0022 18.9 1.8 3 23 444 464 444 464 0.99 7 11 0.098 6.7 7.9 0.2 3 23 483 504 481 504 0.96 8 11 0.00033 0.022 15.7 3.9 1 23 521 543 521 543 0.98 9 11 1.3e-05 0.00089 20.1 0.1 1 23 549 572 549 572 0.96 10 11 0.00012 0.0083 17.1 0.4 3 23 582 602 580 602 0.96 11 11 0.00019 0.013 16.5 2.1 1 23 608 631 608 631 0.96
Sequence Information
- Coding Sequence
- ATGTATAGTTTAGCCGCAAAACATACAAGCAATCATTCATTTAACACATTGGGACATACATTTTCGCGATTGCTACAAATTCCTaTGTTTGAGAAAAGCCAACATGTATGTTTTGAATGTGCAAAACTAATGTACAAATTCAGGGCATTCAAAACTCAGTGTGAAAAAGCACAAGCTTTACTATCTGCAGTGATAGAGGATAACCCTGAAATAATAAGAGATGTTATTAAAAACATTGATAGAAAAACTCACAAATTAACTTCTAACTTAACACAATCATGTATAGAATTCatcaattttaatattgtatGCGATAACAAAGTATCAAAAATTCCAGCAAATAATATAGaaccaaatataaaaatagaagaTGAAATAGTTCAGGCAACAAATGACTTTAAAGTAAATAGCAATGTagaatatgaagaaaataagaatatacttaaaaaagagTATGTTGAAAATATAGATGAATATGATGGAGAAATTGAATACAGCTGTATGGAAGATAgcttggattctgatttaattgtttttgttaaagACAAAGAATCACCAAAAATAAGGAAAAGAAAAGTTAAGAACAAAATCAAAACAGATGGTATAGAACACTTGTGTGATGATGAACCTTTATCTAAAGTATCTAAAAGGCTGAATAAAAAAGTAGAAAATGTAAAAAGTAAATATCCGAAAAATTTTAATGTGAGTTTCTTTGAAGAATATGCTACTGTTGTCTTTATGACGCCGGAGGATGCGAAAAAAGAACTATTGCTTAGAAAAGAATCTTCAAATTATAAAACATGTCCATTCAAATGTGAGTTTTGTTATAAAGGATATGAAGTTAAGACTACCTATGAAAACCATATGAAAAGGCATAGTGTGGAATCTGGTGAATATGAGTGTGATCTTTGTCATATAAGATTTCCGGAGCAAAAGTTCCTCGGTAAGCACCGTCTAGCTTGCCACAAGAGAAAGTTCTGCTGCAAGTTATGTTCATACATTTGTTATTGCACACACCAAGCCACAACTCACGTGAAGTTACACATGGGAATGAAGTATCCTTGTTCGGAATGTGACGAGGTATTCAGCATGCCGAACAGTCTAGCGATGCACAAACGCAAGAAACACGTGACAGAGTGTGTGTGTGAGTTATGTGGAAGCACATTCGCAACGGCACGTGGATTGTACTTTCATAATTTGAAAATACACCGACAGGATGTAAACAATAAACTGGGCCCAAAATGCGATGATTGTGGAATACATTTTGCCACTGAGATGGCGTGGAAGAAACACTTTGTGCTCTCCTCAAAACATCGTGTCagcAATGGGTGCAAGCATTGTGGTGAAACATTTACAAACATAGAACAGCTAAAGTCCCACGTAAAGATACATGCGAGGAGACAGGCGCGTCGAGTTCATAGGCTTGGCCGAAAATTCCCGACGGCTTGTGGCATCTGTAATAAATGGCTGTCGAATCGCATCGAGTACAAATCTCACATGACGACTGAACATCCTCATTCCGACGTCGCCAAGAGGTTGAGTATAGATGATGAGACTCCATTCGTATGTGAAGTCTGTGGACAAATGTTTAGGATGCAGTGTTTCCTGCGGTACCACCAGCGCAAGCACACGGGCGAGCGTCCGTTCTCGTGCCCGGAGTGCGACAAGTCGTACAGCGCGAAGAGCGCGCTGGCGGCGCACCGGGCGCGCGTACACGAGCGGGTCGCGCGGGCGCCGCTCGCGTGCCGCGTGTGTGGACGCACCTTCACATGGCGCAGCGGACTCAACAAACACATGAAGGGTCATCTGAACATACGCCCTCATAAATGTACAATATGCGACAAAGCGTTCATCAACGCGTGTGATGTGAAATTGCACATTAAATATGTCCACAACAAAGTGCCATGGCCGAAACGCGACAGAACAAAGCGGAAAGATACTATAAACGCACTAAGTTCCTGA
- Protein Sequence
- MYSLAAKHTSNHSFNTLGHTFSRLLQIPMFEKSQHVCFECAKLMYKFRAFKTQCEKAQALLSAVIEDNPEIIRDVIKNIDRKTHKLTSNLTQSCIEFINFNIVCDNKVSKIPANNIEPNIKIEDEIVQATNDFKVNSNVEYEENKNILKKEYVENIDEYDGEIEYSCMEDSLDSDLIVFVKDKESPKIRKRKVKNKIKTDGIEHLCDDEPLSKVSKRLNKKVENVKSKYPKNFNVSFFEEYATVVFMTPEDAKKELLLRKESSNYKTCPFKCEFCYKGYEVKTTYENHMKRHSVESGEYECDLCHIRFPEQKFLGKHRLACHKRKFCCKLCSYICYCTHQATTHVKLHMGMKYPCSECDEVFSMPNSLAMHKRKKHVTECVCELCGSTFATARGLYFHNLKIHRQDVNNKLGPKCDDCGIHFATEMAWKKHFVLSSKHRVSNGCKHCGETFTNIEQLKSHVKIHARRQARRVHRLGRKFPTACGICNKWLSNRIEYKSHMTTEHPHSDVAKRLSIDDETPFVCEVCGQMFRMQCFLRYHQRKHTGERPFSCPECDKSYSAKSALAAHRARVHERVARAPLACRVCGRTFTWRSGLNKHMKGHLNIRPHKCTICDKAFINACDVKLHIKYVHNKVPWPKRDRTKRKDTINALSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -