Cbil019127.1
Basic Information
- Insect
- Clanis bilineata
- Gene Symbol
- ZNF296
- Assembly
- GCA_036417725.1
- Location
- CM071158.1:24233650-24251596[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.028 1.9 9.7 0.1 3 23 130 150 128 150 0.96 2 15 0.43 30 5.9 2.0 1 23 263 285 263 285 0.98 3 15 1.1e-05 0.00078 20.3 0.2 1 23 291 314 291 314 0.97 4 15 0.028 1.9 9.6 3.8 1 23 319 342 319 342 0.93 5 15 5.4e-05 0.0037 18.2 0.8 2 23 506 527 505 527 0.97 6 15 0.00077 0.052 14.5 4.9 1 23 533 555 533 555 0.98 7 15 0.36 24 6.1 3.1 1 21 615 635 615 637 0.91 8 15 7.6 5.2e+02 2.0 0.1 2 23 645 666 644 667 0.90 9 15 0.0027 0.19 12.8 4.0 1 23 672 694 672 694 0.95 10 15 0.00044 0.03 15.3 0.4 2 23 702 723 701 723 0.95 11 15 0.00064 0.043 14.8 2.1 1 23 732 754 732 754 0.98 12 15 0.00015 0.01 16.8 0.6 2 23 801 822 801 822 0.97 13 15 0.0081 0.55 11.3 5.7 1 23 839 861 839 861 0.97 14 15 1e-06 7.1e-05 23.6 0.6 1 23 867 889 867 889 0.98 15 15 1.1e-06 7.6e-05 23.5 3.1 1 23 895 918 895 918 0.98
Sequence Information
- Coding Sequence
- ATGAATGTGGGTATGGACATGGATCCTCTGAGTAACTACGAGTATCCGAACTATGATGCATACAGCAACATCTCAGTTCCGTACTCGTACGACCACAGTGTCAAGGCGGAACTACCACATTACAATTACAACCAGAACGTAGTCCCACCAATAGACAGTTATATTGCAGCTCAAAATAATGGCAATAACCACCAAAATACACAAAGTACAGTCGTACCAGCGCCAAATGAGCTACCACCGTCAGAAATCAAACCAGCAGAAATAATACCACCAGAGGAAGTCAAACAGGAAACGGATGGTACGAAAGTCAAAAAAGAAAAAGTGAGAGGTAGAAAGAGTAGTTACTGGTCGGTAAAGATAACGGACAAAGATTTCGCATTTTACGGATGTGCGATTTGTAACATTAGCTATAAGACTCTTAACGAGTTAGATCAGCATGTCACGATGCACAAAGGCAGAGTCACCAGCTACGATCTTAGAGTACACAATCAGACAAAAAAGAAACAGATgaagaaacaaaagaaattaAAGGTGAAAGAGGAAAAGAAAGATTTGGATATAGAGATAAAGCCTGAAGATGGTTATATTGGTGAGGAAAAGGCATCCGAATATAACTCTAATGACAATGTAAATAACGTAAACGGtgttaataatgaaaataacatGAATAACGATAATGATGCGAAAGGTTCAGAAACTGAACATAAAAAGAAGTTTCTTAATGTGGTGAAAGAGGAAGACAAGTGTCGGGAGGCTGACAAGGACTTGATGAATCTGCAAAAGATATACAAATGCTTTGCATGTCAGAAACAGTTCCtgataagttattatttaagGCTGCATGTGAGGTCTCATACTGATGAGAAACCATACACATGTCCGGTGTGTGGACAGTCGTTCATCACAGCCAGCAAGCTCGGCAGGCACAACAAGCGGATACACCTGGCCGTCAGGCACCAGTGCAGGATATGCTTCAAGATCTACTCGCAATTCGATTTGCTCATGCGTCATTTCGATAAGAAACATGCGGAAGACAAATTGGAAGGAGAGCCTTATGACTACAACGCAATCCTGCCCTACCTGAAGGAGCTAGAGGAAGAGCTACAAGAGAAGTCCGAAGAAAAGAAGCCCAAAGATGAGGTGTGGCCTGACCAGTGGGTCCCGGAGGTTGTCGACGTGGGCACAGACCAGAAACCAAAAGAACAGGATGAGAAGCATGAGGAAGACACGAAGAACTTCTTTCTGGAGATGGAGCCGCCGACTCAGATAGTGGTTGAAGAGGTGAAGGTGATGGTGGAAGAGGAGATACCCGTCAAGAAGGAGGACGATGATGATGGACTGGATCCGCACGACAGCAGCACCGATGTCAAGGATGAGAGGGACTATTCTGACGAGGACTACTTCCCGTCGAACACGTGGGCGCGCGTGTCCCCTCCGCCCGCGCCGGTGGGTGGTGGTGGGGGCGGGTCCCCCCGGGTGCGTggtgggggcgggggcgggggctcCGGCCCGCTGTCGTGCGGCGTGTGCAACAAGCGCATCTCGTCGCGCACGTACCTGCGCGTGCACATGCGCACGCACACGGGCGAGCGCCCGTTCAAGTGCCACGTGTGCCAGCGCGGGTTCATCACCTCCAGCAAGATGCACCGGCACGCGCTCACGCATCAGGACGgtGACGTAGGTGTaaaaaaggagaaaattaaaGAAGAAGACGACGGACAAGACGATGAAACTGACGCCAAGGTTGATGGAGAGGAAAAGAAGAAATCAAAGAAGAAAACGCAGAAGAAGCGCCCGAAGAAGGAAGTCGATAAGCAGAAGAAGCGTCACCAGAAGCGGCCGCACGCGTGCGAATATTGTCAGAAGAGGTTCCTGCACCTGGACACGCTGGAGGTGCACAAGAAGTGCCACGAGGGCGAAGTGCTCGTGCTGAAGTGCTCGTACTGCATGGAGGAGGCGCCCGACGAGCCGGCGCTGCGCTCGCACGAGGCCACGCACCACGGACCGAAGCCCTATCTGTGCACGCTCTGCGGCAAGTCTTATAAGAAACGGGAGACGCTGGTGTACCACCGCAAGCACCACAAGCCCGGCGGCCGCGAGCTGGTGTGCGACATGTGCTCGAAGCGGTTCAGCTCGGGCGGCAAGCTGCAGCGGCACCTGGTGTCGCACCGCGCGGACCGGTTCGTGCTGCGGTACGAGTGTCCCGTCTGCGCGCACATGTTCAACACCAAGTACCACGTGCAGATGCATCTCGCCACGCACCAGAAGGAGGGGCTCATAATGGAAGAAAACCGCAACGAAATACTAGCGATGGTGTTGCAAAACGCGCGAAAAATACCAAAACACCCAGACGCGCCCGCCAGCCTCACCGACCTGATGCCGGCAGACGAGCGCAGCCGCGTGTGCAACATATGCGGGGAGGTCTTCCAGCACTTCTACTACCTGGAGGAGCATCTCAAGAGCCACGGCTCAAAAATAGCCATAGAGGATCTCGACAAACCCGAAGAAAAGAAATATACCTGCCAAGTGTGTCAGAAATCGTTCAAACTACATTACTATTTGAAGTTACACAGTTTCACACATACAAAAGAGAAGCCTTTCATATGCCAGCAGTGTGGGAAAGGGTTTATAACTAAAGGCAAGCTTAAACGGCACATTGAGACCCACACTGGTTTGAAGAAGTACCAGTGTCACGTGTGCTACAAGTTCTTCACGAGGCCCAGTTACTTGAGGATCCATGTCAGGACCATACATGGGACCCAGGACTATAATTTCAGTCTGAAAGACTATGGTGTGGGCTCTTTCGGGGCGTTGTCTGTTATGACACAGTTGACTCAGAGTAGTATGTGA
- Protein Sequence
- MNVGMDMDPLSNYEYPNYDAYSNISVPYSYDHSVKAELPHYNYNQNVVPPIDSYIAAQNNGNNHQNTQSTVVPAPNELPPSEIKPAEIIPPEEVKQETDGTKVKKEKVRGRKSSYWSVKITDKDFAFYGCAICNISYKTLNELDQHVTMHKGRVTSYDLRVHNQTKKKQMKKQKKLKVKEEKKDLDIEIKPEDGYIGEEKASEYNSNDNVNNVNGVNNENNMNNDNDAKGSETEHKKKFLNVVKEEDKCREADKDLMNLQKIYKCFACQKQFLISYYLRLHVRSHTDEKPYTCPVCGQSFITASKLGRHNKRIHLAVRHQCRICFKIYSQFDLLMRHFDKKHAEDKLEGEPYDYNAILPYLKELEEELQEKSEEKKPKDEVWPDQWVPEVVDVGTDQKPKEQDEKHEEDTKNFFLEMEPPTQIVVEEVKVMVEEEIPVKKEDDDDGLDPHDSSTDVKDERDYSDEDYFPSNTWARVSPPPAPVGGGGGGSPRVRGGGGGGGSGPLSCGVCNKRISSRTYLRVHMRTHTGERPFKCHVCQRGFITSSKMHRHALTHQDGDVGVKKEKIKEEDDGQDDETDAKVDGEEKKKSKKKTQKKRPKKEVDKQKKRHQKRPHACEYCQKRFLHLDTLEVHKKCHEGEVLVLKCSYCMEEAPDEPALRSHEATHHGPKPYLCTLCGKSYKKRETLVYHRKHHKPGGRELVCDMCSKRFSSGGKLQRHLVSHRADRFVLRYECPVCAHMFNTKYHVQMHLATHQKEGLIMEENRNEILAMVLQNARKIPKHPDAPASLTDLMPADERSRVCNICGEVFQHFYYLEEHLKSHGSKIAIEDLDKPEEKKYTCQVCQKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHIETHTGLKKYQCHVCYKFFTRPSYLRIHVRTIHGTQDYNFSLKDYGVGSFGALSVMTQLTQSSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -