Cbil019196.1
Basic Information
- Insect
- Clanis bilineata
- Gene Symbol
- -
- Assembly
- GCA_036417725.1
- Location
- CM071158.1:25096922-25104526[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 36 0.002 0.14 13.2 1.8 2 21 164 183 163 184 0.93 2 36 0.84 57 5.0 0.5 1 23 217 240 217 240 0.95 3 36 0.0014 0.098 13.7 3.2 2 23 246 267 245 267 0.95 4 36 1.5 1e+02 4.2 4.8 3 21 272 290 271 291 0.93 5 36 0.0077 0.52 11.4 0.8 2 23 333 355 332 355 0.94 6 36 0.0038 0.26 12.4 1.7 1 23 388 410 388 410 0.98 7 36 0.0056 0.38 11.8 1.6 1 23 416 439 416 439 0.97 8 36 0.0032 0.22 12.6 2.3 1 23 448 471 448 471 0.96 9 36 0.029 2 9.6 0.7 1 21 479 499 479 500 0.94 10 36 1.4 95 4.3 0.1 2 21 614 633 613 634 0.89 11 36 0.46 31 5.8 0.3 1 23 664 686 664 686 0.96 12 36 0.00039 0.026 15.5 0.6 1 23 690 712 690 712 0.96 13 36 0.02 1.4 10.1 4.2 3 21 717 735 716 736 0.93 14 36 0.0058 0.4 11.8 3.7 1 23 746 769 746 769 0.93 15 36 0.0032 0.22 12.6 1.8 1 23 775 797 775 797 0.98 16 36 0.0029 0.2 12.7 3.2 1 23 804 826 804 826 0.98 17 36 0.00045 0.031 15.3 0.1 1 22 840 861 840 861 0.96 18 36 0.00024 0.017 16.1 0.8 2 21 970 989 969 990 0.93 19 36 1.1 74 4.6 0.6 3 23 996 1016 995 1016 0.91 20 36 0.079 5.4 8.2 1.7 2 23 1022 1044 1021 1044 0.88 21 36 0.11 7.7 7.7 4.5 1 23 1049 1071 1049 1071 0.96 22 36 0.00045 0.031 15.3 0.4 1 23 1107 1130 1107 1130 0.95 23 36 1.4e-05 0.00095 20.0 1.3 1 23 1136 1158 1136 1158 0.98 24 36 3.4 2.3e+02 3.1 0.7 5 23 1168 1186 1166 1186 0.95 25 36 9.2 6.2e+02 1.7 0.5 1 23 1192 1215 1192 1215 0.86 26 36 0.023 1.6 9.9 3.0 1 19 1223 1241 1223 1246 0.88 27 36 0.00022 0.015 16.2 1.0 2 21 1386 1405 1385 1406 0.93 28 36 1.7 1.2e+02 4.0 0.1 3 23 1413 1434 1412 1434 0.95 29 36 0.25 17 6.7 2.1 3 23 1441 1462 1439 1462 0.93 30 36 6e-05 0.0041 18.0 1.2 1 23 1467 1489 1467 1489 0.98 31 36 1.1 72 4.7 1.2 2 20 1493 1511 1493 1513 0.93 32 36 0.00014 0.0093 16.9 0.4 1 23 1539 1562 1539 1562 0.95 33 36 0.00078 0.053 14.5 0.5 1 23 1568 1590 1568 1590 0.95 34 36 0.19 13 7.0 0.1 1 23 1596 1618 1596 1618 0.97 35 36 0.0037 0.25 12.4 0.8 1 23 1624 1647 1624 1647 0.96 36 36 0.024 1.6 9.9 0.3 2 23 1654 1676 1653 1676 0.92
Sequence Information
- Coding Sequence
- atgacTCGGCAAGTGGATGTAAAAGCATTAGTCTCCCATATAGTCAAAGGCGATGGAGCGGACAAATGCCGAATTTGTATGGGCGATACCACCGAGGGTCAAGTTTTCCTTGGTGACACGGTGATGATGGACGGAGACAAGGCAGTGACCCTCGCTGAGCTTTTAGAACTTGTCACAGGAGTTGAGGTGGCCGAGGATGAAGACCTGCCCAACGGCCTGTGCAGAACATGCTCGGCATCTGCATTTGATGCTGCCAAGTTCCGGACATTCTGCCATCAGGCTAACACACATTGGACCACTGTACTTGATATGCTCAACATGATACCAAAAAACAATCTTGTTGCTAACTCCAAAAATATATATGCACTGATATCAGGAAACAAAATATCCATACATACCAATAACCTGTTTGATGATGAAGAAAAACTAAAAGAGACATGTCCAAAGATAAGAAATATAAAACGTAACAATCTGAAACGTTTGAGGTGTCAATGTTTAAATTGTGGGAAGAAATTTATCTATGCATATCAACTGCATGCTCATTTGAAGGAATCGATGGATTTGATACAAGCCTGCTATGTTTGTGCAAAAACTATGAAAAGAGAGAAATTGATCAATCATTTGGTCCAAAAACACAATAAGAAACCACATCCATGCAAGAAGTGTCCAGCGTTGTTGAATTCAGTTGAGCAATATAAAGAGCACATGTTGAGAGAACATGGTCCAGGAGCATGTAGTTGTGGTGACTGTGGGAGAACTTTCCAATCAAAGTATGCATACTGCGCACATCTGTCGATCCACACGCCTAAGAATTGTCCCCGATGCTCCAAACTGTTCCGTAACCAGAGATGCTACATGCACCACGTAAAGAAGTGCTGTGACTTACACAAGGACAGGAAGGAAGTGCATCAAACAAAGCACAAGTTGTCCATCCTAGTTGAAAATGAGGATAAACAGATCAAAGTGGGCCTCCGAGGTGCTGCCAATGAGGAGTGCATTTGTGACTACTGCAACAAACGGTTTTCCGCAAAGAAATTTGTCGCTGCACACATACAAATTGTGCACCTAAAGAACACCCACCGACCGTGTGCTTTCTGTGGCAAGTTTCTAGCTGCTGCTCGAATGTCGGCACATATGAAGAAGCACCAGCCTTCACAGAATTATAAATGTGAACACTGCGGCATGGTGTTAAAGTCCAAGTTGGGATACAGTCAGCACTTGCGGCTTCACACTGGTGAAAAGCCATATGTATGCCAGCATTGTGGGGAGTCTTTTAACGCCTCTTCTAGAAAGTCTGAGCACATTCGTAGAATGCACAGAAACACCGAGGAGGTTTTACGTCACGCGTGTCAACACTGCCCGGCGAGATTTCGTCTTCCATACAGATTGAAGAAACACATATTGACTGTCCATAGTAAGACGAAAATTCGGCTCTATGAGTGCAACAACTGTAAGGTGAAGTTCGCGAGCTGCAGGGCGCTGTTGGCGCACAGTAGGATGTGTCGTGCGGTGGAGACCAGCTCAGTTCTGCCAAACAAACTGTGCAAGCAGTGCATGGCTCACATAACCGCCTTCCTACCGTTCCTGCTCCTATGCAAGGAGTCCTCTAACCGGTGGCACCAAATCACGAGGCTGTTTGACAACACCAAACTCTCAAAGAAAGCTAAAAGCCACTATTTCTTAGTCTTGAATGATATTCAGTCTTATTCCAGCACAAAAACAGCTGCAAACCAAAAAGAGGCATTGCGGAACTTGAAAACTTTAATGACTTACAGAACGCGTTATAATaaaagactggcaaaggagAACCAAAGTCGGAGGCGCGCTTCGGGGACAATGACGTGCCCCGAGTGCCAAGCTACTTATACCAACATcttaaaatacaatatacaCGTTAAAAACGTGAAGAAGAAGATGTGCGTGCTGTGCAACACTTTGGTAGACCTGGATGAATACAAGACACATCTGGACAGTCATGCGGTTACGGTTTTTGCTTGTAACTCGTGCCCCGAGGCTTTTTTAAAAGAAACGTCTTTAAATATTCATAGATCGAAGCACAAAGGGAATCATTATTGTGTGGAGTGCAAGCAAAGTTTCGTCACGTCGGCAAATCTCGCCGTACATTTGGTGAAACACCGGTCTGAAATCTGCACTGGATGCAATAAGAAATTTACCAATAAAATATGCTACACGAGACATAAGAAGAAATGTATAAACAAAGACAATCTGAAGACCTACATATGCGACTACTGCTCCAAAGTATACAAAAAGAGGAACACTTTAAAGCTGCACATCTTTCATAATCATTTGTCTGGGAAGCAGTTCCAATGCGACCAATGCGGAAGAACCTTCCTGAGCCGAGTGCATTTGGTCGAGCATAACAACACTCACAACAAGATCTTGGATCGTTACATATGCTCGAAATGTGGAAGCAAATTCAGTACCCGACGAGGATATGAGAGACATTTCAAGAAGCATGACTCTGCCACTTTTGATCCTATGTCGAAGAAGATGAAATACGTGTGCCCGATCTGTAACAAGGTTTACTATCAAAAGAAGAGCATTGACAGTCATATGAGGGTGGGAGAGGAGCCCGCGCTGCCGCAGGGGCTCTGCAGGATGTGCTCCGAGCAGACCATGGAGGCCTATCGCTATCGGCAGCTCTGTCTGCTCTCCAACCAGCACTGGAGAGACGCCACACTGGGCCTGGCGCAGATACAAGCGACTTCAGACGACGACAAAACATTGTACGTGGTGTACAACGGGCACATGATGATAATAAAGGACCAGAACGAGCGGGTGCCGAACGAATCCGAGGCTCTGAAGAAACTCAACCACAAATTCAAAGAACCGTCGCCCGACAAGCCGCCGAAAAGGATGAAGCGCTCGTCCGCACCGATCAGATGCAGCTGCTCCGACTGCGGGAAGACCTTCATAAATACTGAACTTTTGAACATTCATCTCAAGAACTCGTTAAAACGTGCCTGTCACATGTGCGGTGTCGTTGTGCCCAAAAAGAACCTGTCGAAACACTTGCTAGATAAACACGACGTGGTGGTGATGGAGTGCAGCACGTGCCACTGCGTCTTCGACACTCAGCAGCAGTTGGCGGAGCACTCGGTCAGCGCCCACGGCCCCGACACGTTCTCCTGCAAGTGCTGCGGCAGCGGCTTCACCAACCACAGAGCTCTGCGTGCTCATATGTATTCCCACACGCTCTTCCACTGCGACGCTTGCGGAAACAGTTTCGAAAACAGAAAATGTTACAAACACCATCAGACGCACTGCGAAGTAACCGACGGACCCCGAGAAGAAGTATACATTTGTGATTATTGCAACATAGAGTACAATAGGAAGCCCTCGCTACGTATTCATATGATACAGAAACATCTGAACGTCAACCCTTACATTTGCCAAGTTTGTGGCAAGAGGGCGTCGACGATGGCGCACTTGAAGTCTCATATGAGGACGCACAACGCGATGCGGAGCGTGTTCCAATGCCACTGCGGTGCTACGATGCGCACTGAGGTCGGATACCAGCTGCATATGCGGATCCACTCGGGGGTCAGGCCGTACGAGTGCGAAACTTGTGGGGACAAGTTTCTGTCGGCTTCGAGACGCCTTGACCACATCAAGAGAAGGCACCGCAGCGCCGGGGACATGCCTCATGCCTGCCACAAATGCTCTGCGTCCTTCATCAGGCCCTGGGAGTTGAAAAAGCATTGTCTAATTGTCCACAATGATATTTCAGCTGAACAGACTGCTCAGACCAGGGAAGCGCCGATCAGACGACGTGTCCCTAAGTCGCTTGGTCGGTTTTGCTTCTTTCAGGTAAAAGAAGAGACCCTATTTCCGAACAGCGCATGCGTGGCGTGCGCCAGCACCGCGCTCGCCGCGCAGGAGTTCCGCTACTTCGTGCAGTCCTCACAGAAAATGTGGGAAAGGGCCATCACCAACCTCTCAAGCCTGCCCACCACAATGTCCTCCACTCCTAAGTCACTCTGCGTGCTGGTCACCCCTAACGACATGCGCATACAAACTATCAGGAACTACTCCGGTGGCGACACGAAGACCGTCATAAACAGGCTCAAAACTGGGATAAGTAGAAAGCCATTCGGGCGGAAGCGCCGCACCGACCGCACCGGGCCCTCGTGCACCTGCCCCGACTGCGGCAAGAGCTTCATCAGCCCGCACTTCCTCAGCCTGCACCTCATGAACAGCGGACAGAAGGAGGCGTGCGTCTTGTGCGGCGACGTCGTCTCCCGCGGCCGGCAGATGAAGCAGCACATGAGCACGGCACACCGGACCGAGCTGCACCTCTGCACCGAGTGTCCGCTGCTCTTCCCCACGGGAGACGACTTGAAGAACCACACGAAACTGTGTCACAAACCGGGCTCGTTCACGTGCGGCGAGTGCGGCCGCAGTTTCCCGAGGAAGGGCGCGTTCGACCACCACACGCAGATGCACACCGTGCGGACGTGTCGCAGCTGCGGCGCGCAGTTCACCAACCGCGGCTGTTACAGAGAGCACCGCATACAGTGCGAGCCGGACGCGAAGCCTAGTGTCGAGAGCGTGCCGCGCGCGCGACGCTCCAACATACGCGACCCCGCCACCTACACCTGCGACTACTGCGCCAAGACGTACAACTCGCGGCCGCAGCTCAAGAACCACATCCTCTGGATCCACATGGACGTGCGTCCGCACCAGTGCCAGTGGTGCGGCAAGCGGTTCTACACGCCGGCGCGGCTCGCCGAGCACACCGTCGTGCACACGCGCGTCAGGAACTTCGAATGTGACATTTGTGGTGCTAAATTAGTgtccaaaatggcggccatatATCATAAGAGACGGCACACTGGCGAGCGGCCGTACAAGTGCCAGGACTGCGGTGAAGGGTTCATATCGTCCTCGCGGAGGACGGAGCACGCCAAGCGGAAGCACAACAAGGGTCCGAAGTTGCAGTGTATATACTGTCCGGCGAGTTTTGTGCGTAAACAAGAGCTGTTGAACCACAGAGAGAAGATGCACATGCCCGAGATGGTGTTTGAAAACGTCGACGGTATTGAAATAAAGAAGAGCAAATCGCCAAGAACGTATTAG
- Protein Sequence
- MTRQVDVKALVSHIVKGDGADKCRICMGDTTEGQVFLGDTVMMDGDKAVTLAELLELVTGVEVAEDEDLPNGLCRTCSASAFDAAKFRTFCHQANTHWTTVLDMLNMIPKNNLVANSKNIYALISGNKISIHTNNLFDDEEKLKETCPKIRNIKRNNLKRLRCQCLNCGKKFIYAYQLHAHLKESMDLIQACYVCAKTMKREKLINHLVQKHNKKPHPCKKCPALLNSVEQYKEHMLREHGPGACSCGDCGRTFQSKYAYCAHLSIHTPKNCPRCSKLFRNQRCYMHHVKKCCDLHKDRKEVHQTKHKLSILVENEDKQIKVGLRGAANEECICDYCNKRFSAKKFVAAHIQIVHLKNTHRPCAFCGKFLAAARMSAHMKKHQPSQNYKCEHCGMVLKSKLGYSQHLRLHTGEKPYVCQHCGESFNASSRKSEHIRRMHRNTEEVLRHACQHCPARFRLPYRLKKHILTVHSKTKIRLYECNNCKVKFASCRALLAHSRMCRAVETSSVLPNKLCKQCMAHITAFLPFLLLCKESSNRWHQITRLFDNTKLSKKAKSHYFLVLNDIQSYSSTKTAANQKEALRNLKTLMTYRTRYNKRLAKENQSRRRASGTMTCPECQATYTNILKYNIHVKNVKKKMCVLCNTLVDLDEYKTHLDSHAVTVFACNSCPEAFLKETSLNIHRSKHKGNHYCVECKQSFVTSANLAVHLVKHRSEICTGCNKKFTNKICYTRHKKKCINKDNLKTYICDYCSKVYKKRNTLKLHIFHNHLSGKQFQCDQCGRTFLSRVHLVEHNNTHNKILDRYICSKCGSKFSTRRGYERHFKKHDSATFDPMSKKMKYVCPICNKVYYQKKSIDSHMRVGEEPALPQGLCRMCSEQTMEAYRYRQLCLLSNQHWRDATLGLAQIQATSDDDKTLYVVYNGHMMIIKDQNERVPNESEALKKLNHKFKEPSPDKPPKRMKRSSAPIRCSCSDCGKTFINTELLNIHLKNSLKRACHMCGVVVPKKNLSKHLLDKHDVVVMECSTCHCVFDTQQQLAEHSVSAHGPDTFSCKCCGSGFTNHRALRAHMYSHTLFHCDACGNSFENRKCYKHHQTHCEVTDGPREEVYICDYCNIEYNRKPSLRIHMIQKHLNVNPYICQVCGKRASTMAHLKSHMRTHNAMRSVFQCHCGATMRTEVGYQLHMRIHSGVRPYECETCGDKFLSASRRLDHIKRRHRSAGDMPHACHKCSASFIRPWELKKHCLIVHNDISAEQTAQTREAPIRRRVPKSLGRFCFFQVKEETLFPNSACVACASTALAAQEFRYFVQSSQKMWERAITNLSSLPTTMSSTPKSLCVLVTPNDMRIQTIRNYSGGDTKTVINRLKTGISRKPFGRKRRTDRTGPSCTCPDCGKSFISPHFLSLHLMNSGQKEACVLCGDVVSRGRQMKQHMSTAHRTELHLCTECPLLFPTGDDLKNHTKLCHKPGSFTCGECGRSFPRKGAFDHHTQMHTVRTCRSCGAQFTNRGCYREHRIQCEPDAKPSVESVPRARRSNIRDPATYTCDYCAKTYNSRPQLKNHILWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVSKMAAIYHKRRHTGERPYKCQDCGEGFISSSRRTEHAKRKHNKGPKLQCIYCPASFVRKQELLNHREKMHMPEMVFENVDGIEIKKSKSPRTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -