Cbil018683.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Clanis bilineata
Gene Symbol
-
Assembly
GCA_036417725.1
Location
CM071158.1:20261320-20272271[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 43 0.0034 0.23 12.5 0.8 1 23 41 64 41 64 0.94
2 43 0.2 14 6.9 0.2 3 23 94 115 93 115 0.90
3 43 0.0048 0.33 12.1 2.3 1 23 137 159 137 159 0.98
4 43 0.01 0.7 11.0 0.1 1 23 163 185 163 185 0.95
5 43 0.046 3.1 9.0 0.4 1 23 190 213 190 213 0.95
6 43 0.011 0.75 10.9 5.6 1 23 219 242 219 242 0.96
7 43 0.00053 0.036 15.0 0.2 1 23 249 272 249 272 0.98
8 43 1.3e-05 0.00086 20.2 1.6 1 23 278 300 278 300 0.97
9 43 3.9e-06 0.00027 21.8 2.6 1 23 306 328 306 328 0.98
10 43 0.00017 0.012 16.6 6.6 1 23 334 356 334 357 0.96
11 43 4.5 3.1e+02 2.7 0.6 3 23 512 533 510 533 0.93
12 43 0.39 27 6.0 0.0 1 23 557 579 557 579 0.96
13 43 0.0017 0.11 13.5 0.2 1 23 583 605 583 605 0.98
14 43 0.00051 0.035 15.1 0.3 1 23 610 633 610 633 0.96
15 43 0.037 2.5 9.2 0.6 2 23 640 662 640 662 0.93
16 43 0.29 20 6.4 7.0 1 23 669 692 669 692 0.96
17 43 0.00025 0.017 16.1 4.9 2 23 699 720 698 720 0.96
18 43 0.00089 0.06 14.3 4.1 1 23 726 748 726 748 0.98
19 43 0.26 18 6.6 0.9 1 23 883 905 883 905 0.96
20 43 0.27 19 6.5 0.1 2 23 931 952 930 952 0.97
21 43 0.062 4.2 8.5 0.2 1 23 974 996 974 996 0.97
22 43 3.7e-05 0.0025 18.7 0.3 1 23 1000 1022 1000 1022 0.99
23 43 7.7e-05 0.0052 17.7 0.5 1 23 1027 1050 1027 1050 0.96
24 43 0.00014 0.0097 16.9 0.5 2 23 1057 1079 1057 1079 0.97
25 43 0.00021 0.014 16.3 1.1 1 23 1086 1109 1086 1109 0.98
26 43 0.0096 0.65 11.1 3.9 2 23 1116 1137 1115 1137 0.96
27 43 6.3e-07 4.3e-05 24.3 1.8 1 23 1143 1165 1143 1165 0.99
28 43 0.0048 0.32 12.1 0.2 2 23 1258 1280 1257 1280 0.96
29 43 0.00017 0.012 16.6 4.2 2 23 1304 1325 1303 1325 0.96
30 43 0.16 11 7.3 0.2 2 23 1329 1350 1328 1350 0.95
31 43 0.021 1.4 10.1 3.8 1 23 1355 1378 1355 1378 0.95
32 43 2.3 1.6e+02 3.6 3.6 2 23 1390 1412 1389 1412 0.94
33 43 0.3 20 6.4 0.8 1 23 1418 1441 1418 1441 0.95
34 43 2.1e-06 0.00015 22.6 1.7 2 23 1446 1467 1445 1467 0.97
35 43 1.1 75 4.6 1.7 1 23 1514 1536 1514 1536 0.98
36 43 0.16 11 7.3 0.2 2 23 1564 1586 1563 1586 0.93
37 43 0.0006 0.041 14.9 3.0 1 23 1609 1631 1609 1631 0.97
38 43 0.53 36 5.6 0.7 2 23 1636 1657 1636 1657 0.95
39 43 2.1e-06 0.00014 22.6 0.6 1 23 1662 1685 1662 1685 0.96
40 43 0.0024 0.16 13.0 1.4 1 23 1723 1746 1723 1746 0.97
41 43 0.041 2.8 9.1 4.6 2 23 1751 1772 1750 1772 0.97
42 43 0.00072 0.049 14.6 4.8 1 23 1778 1800 1778 1800 0.96
43 43 0.0011 0.073 14.1 0.3 1 23 1809 1832 1809 1832 0.95

Sequence Information

Coding Sequence
ATGTCGAAACACAATCAAGACATCAAGAAGAGAGATGATGATATAAAAGCACGAAAACGGCACGCCACCATTCTGTTAGAAAACTCAAGAATATGCCCATTCAGGTGGACCAAGAACCTTTATATCTGCTTCTACTGTGAACTGAACTATTCCGATCCGTCCAGTCTCAGGGAACACCATCTAttagaacataataatttaaaggCATTAGAAATAGAGCATGCTCTCTCTAGATTAAAAAAGTATGAATTAATAAAAGTAGACGTCACTAATGTGGATTGTAAGATTTGTAATGAAAGTTTAGAAGATCTAAATAGCCTTAAACTACATTTAGTGGAAAAACATAAAAAGAACATTGATATGAAAGTTAGTGATGGTGTGCTTCCCTTTAAAGTGACGCTTGCAGACTTCCGATGTGTGATTTGTAAGGAAAAGTACGACGAATACAAGTCGCTCAATCACCATATGAACGTgcattttcaaaattttatatgCGAACAATGTGGCGCCGGTTTCATAACTCCAGAAAGACTGAGAACTCACGCATTCTCACATGAGACGGGATCGTTTTCTTGTGATGGGTGCGACAAATTGTTTCGCTCTACGAATGCTAAGAACGAACATTACGCAACAGTACATTTGAAAGTGAAACGGCATCGCTGTCCTCATTGTACCGAAACATTCAGAAATTATTTCCAAAGGAACAAACACATATCGTCAATACACGGGCTAAAATTGAAAGAATTCAAGTGCACTATGTGTCCGAGGGTGTTCAATTTAAGCGGGAAGCTGGGAGTCCATGTACGAACTGTGCACTTAAAGATGAAAAGACACTCGTGTGACGTTTGCGATTGGAAGTTTTATTCTAAATCAGAATTGAAAGACCACATGATCAGACATGGAGGGGAACGGAAGCACCAGTGCAGCATCTGCAAGAAAGCGTATGCTAGGAAATATACTCTACGGGAGCACATGAGAATTCATGACAATGACAGACGATTCGTTTGTACAGTATGCGGCAGGTCTTTCGTTCAAAACTGCAGTCTCAAGCATCACACTAAGATACATCATCCCCAAGTTGGAACATCATTATTAAGGTGTAAGAAGATTGTGCCGTTATTTCAAGTAGCATATGACTGGACTCTGTGTAGACCGCTGGGAACTATAATGGATTTCGGAAGGTTGTGTTCGAAACGGCCGTCCACACCAGAGACGCCTCGCAGCGCTTCCCCGCTGACCGAGAGCAGACCACCGACGCCACAAGAAGCACCACCCGTCCAAATTTACCGGcctttaacaataaataaagtgCCCGATATAAGACAAAATGCACTTATCATCTTCGAATTCTCAACAGCTTATCCATTTGTATACGGTAATAATAAGTtcaaatgttttatttgctCACAGCCGTACTTGGATATGACTATATTAAAACAGCACATGCAGGAAACCCATACATTTGCGTCATTAAAAAGACTGGTCAACAACAGAAGAGAAAACATCCTAAAAGTAGATGTAAATGATATAAACTGTAAATTGTGTCACGCTAAGCCTAAAGACTTAGTGGAACTGAAGCAACATCTTAAACTCGTCCACAAAAAACCAGTAGATCCTGAGCTTCACGACAATTTGATACCCTTTAAATTAAATTCTGCGAATGGGCCGTACGAATGTGTAGTCTGTCAGGAATCCTTCATTAAAGTGAGGATACTTGTCATTCACATGAGTGTTCATTTTAACAACTACAGCTGCGAAGTGTGCGGCTCGGGGTTCATGACTTTGCGCCTTCTGAAGAAGCACTTGGAAGTGCACGAAACGGGGAACTATCCATGCGATCGATGCGAGAAAGTGTTCAGTACTCCATACAAACGGACACTACATATTCGCGGAGTTCATTTGAAACAGTTCCCGCGACGGTGTCCTTTCTGTCCCGAAAGATTTAACTCTAACTACAAGAGAACTATTCACCTTCAAGACGTCCATAATCAGTCAACGAGAGTACATAAATGTCAAACATGTGGCCGAGGGTTTAACTTGAAATACCATTTGATTTGCCACACGCGCTCCGTTCACATGCAAGAAAGAAATCAGCAGTGTGATGTGTGTCACCAAAGATTTTGCAACAAGGAGACTTTAAAACGACATATGGTGATCCACACAGGAGAAAAGAATCACAAGTGCCATGTATGCGGTATGGCTTTTTTGAGAAGGAAGAACTTGAAAGATCATTTAAGATTGCATGATTTGGGAATCATCGAAGAATCGAATTCCACGTTAATATTGAAAGACGATGACGGAACTGATATAAAACTTAAACTGCTAAAAGTACCAATATCTCTAGATGAATTAAAATATGATTACGAAGACAGTATTACCAATACTTGTAAAAAGGCATTTGCCAAAAAATTCAAGACGGATAAGAGAAAAGCCAGTATGGCGTATTTAAGGGATCCGATAGCGTTAGACAAAATTGATTGGGGAGCTGATAATGAAGCGATAACCCTTCACGTAAAAACAGTTCAAGGATCTTGTATGCGCGATGTTATTAGAAGAAATACGAAAGCTGACCAAAAATGGAAAGAAAATGCGTTGACTATCTTTGAAAATTCTTACGTGTATCCATTCATACATGCTAGCAATAAATACAAGTGCTTTATTTGTTCAAAACAGTTTCTTGAAGCTTTCGCACTGAAGGAACATTCGCTCACTCATAACATAAAAGAAATTAGAGAAGAATTAAACAATAGAGTCAGAGATAAAAATATCAAAGTGGATATAAGTTATGTTCAATGTAGAATATGCTTAGAATCGTTACCAGATCTgaacacattaaaaatacatcttCAAAATCATGGAATTAAACTCGACCTAGACTTTCAAGATAATCTCATCCCTTTTAAATTAAATGGGCATAACTTTGAATGCCAAGTTTGTGGAGAGAGCTATTTAAAGATACGATTACTGATAATTCACATGAGCAAACATTTTAACAACTACAGTTGTGAAGTATGCGGTTCAGTGTTCATATCGCTTACTTTATTAAAACGGCATCTGCAGACGCACGAAACAGGAAGTTTTCCGTGTGACAAATGTAATAAAGTGTTCAGTAACTCTGCGAAACGCACTCTGCACATGCGCGGCGTGCACTTAAAGCAATTTCCGCGACGCTGTCCCATATGCCCTGAAAGATTCAACTCGAACTATCAGAGGACGAAGCACTTACGGATTGTACATAATCAAACAACAGGATTATTCCGTTGTGAGACATGTGGAAGGGAATATGACTTAAAATACCACTTATTAGTTCACATTAGGTCAGTTCACTTACAAGAACGGAACCAGGAGTGCCCCATATGCCACTCGAGATTCTTCTCAAAGTACTGCTTGTCACGACACATGGTGATACACACGGGAGAGAAAAATTTCAAATGCGATGTCTGTGGCAAGGCGTACACAAGAAAGAAAAATCTGAGAGAACATTCTAGAACGCACTTAGGACAACCGGAGCAACCTGGTCCAAGGACAAGTGTATGGCAAATGACCATAGCAGAAAGACAAAACGCAGCGACATTCCTAGAGTACACCACGATCAAGCCATTTTATTATCAACAAGGGAATTTCAAATGCTTTTTTTGCAATGAAGTGTTTCCTGAAATTCATTCAGTGTTAGAACATTCTTTTTTCCATTCCACACCTGATCGAATAAATTTGCTTAAACAACATTTGAGAAAAGGAAAAAGAGTAATTAAAGTTGATATTTCGAACCTTCAATGCAGAATTTGCCAAGAGAAGTACTCTGATTTGGACGACATCAGAAAGCATTTAAACGTTGTTCATAAAAAAGAGTTCAATTCAGCCGGAAATGGTCTTATGGCATACAATCTTAGTCTTATTGATGGCCTTTTACAATGTCACAAGTGCACTAAAAGTTTTAATTCATTCTTCCTTTTGAACAGACATATGAATGCCCACTTTAACGTGGTGTGCGAAGTATGCGGCCTTGGGTTTATGTCGCATCAGAGGTTGATTAACCACAGAGTCGTACATCAGAACGGGATACACGTATGTGACAAATGCCACGAGGTGTTCCCCACGAAACTGAAGCTGCGGTACCACGTGCTCAAGAAACATGATCTCAACaacgataaaaaaattaaacctttAAAATGTCCTCATTGTTTGGAAAGATTTTCTGAACATTACCGAAAAATGACACACTTGCGGGAAGTACATGGGATTACGTTTACTTTTGAGTGTCAGGTTTGCAAAACTGTGTACCTCACGCGACGTGCATTAACGGAGCACACTACTAAGTTACATACACAGAAAATTCAGTGTAAAGTTTGTGGGAAATGCTTTGGTACAAAGTCTCTGCTGAAGATGCATATACGAGGACATAGTGGCCCAAAACAAGAAGAGCGGCAACGGCAAGGCGCGCTCACCAGCATATGGGAACTTACTTTATCAGAACGGCAAAATGCTTCCGAACTACTAGAAAATACAACCGCCCGGCCATTTGTTTACTGcagatacatttttaaatgctTTTTCTGTCAAGAACAATACTCAGACCTCAAGATTCTTCTTCAACACACTCTTACTCATGAAGTACCCGAGAAGACAAAAATCCTGAAAGAATTGCTACCAAAGGGAAAAAGAACAGTAAAAGTAGATATATCAGAACTGAAGTGCAAAATCTGCCAGAACAATTTTAGCGGTTTGGATGACATTCGAACTCATTTAATTAATGACCACGATAAAGAATTTACAAAATCTGGGCATGGATTGATAGCTTATAACTTAAAGTCAGTGGACGGCCAATTCTCCTGCCATGtctgcaaaaaaatatttcaaactttCATTCTTTTAAACCGACACATGAACGAACATTTTAGCAACGCGGTATGCGAGACTTGTGGAGCTGGATTTATGACGCATCGTAGATTATTACAACACAAAGAAATTCATTTACCAGGCGGCTACCCTTGCGATAAATGTCCCAAAGTCTATACCACTAGCTCTAATCTTAAGTCCCATAGAGAGAAAGCACACGAAGGGTTGATCAAAGCACGAATGCTCAGGTGTCCTCATTGTACCGACAGATTTTCCGAGCATTTCCGAAAACTGAAACATTTGAAAGACGCTCATGGAATTACGTTCACATATGAATGTGATGTGTGTAAAAGCATGTTTTCCAGCAGACGGGCATTGACGATGCACACTAATAAATTCCACACAGTAAAGACACGGTGTCAGATGTGTCAAAAGAGTTTTAGTTGTGTCACTACTTTGAAGAAGCACATGATTTCACATACTGGAGAGAGTAATCACGTATGTACGGTGTGCAGGAAGGCGTATAGACATAAAAAGAGTTTAAAGCAACACATGAGTGCTCATGTAAATGGGGAGCAGTTTACCAAATTTTCTTGTTCTGGTTGTGGGAATGGTTTCCCTAACAGAAGAGATTTTAACAAGCACGTTAAGGAATGGCATCCAGGAAGCTGCTTTGAGTATAATATAGAGAAACCAGTTACCCTTATTGAATAA
Protein Sequence
MSKHNQDIKKRDDDIKARKRHATILLENSRICPFRWTKNLYICFYCELNYSDPSSLREHHLLEHNNLKALEIEHALSRLKKYELIKVDVTNVDCKICNESLEDLNSLKLHLVEKHKKNIDMKVSDGVLPFKVTLADFRCVICKEKYDEYKSLNHHMNVHFQNFICEQCGAGFITPERLRTHAFSHETGSFSCDGCDKLFRSTNAKNEHYATVHLKVKRHRCPHCTETFRNYFQRNKHISSIHGLKLKEFKCTMCPRVFNLSGKLGVHVRTVHLKMKRHSCDVCDWKFYSKSELKDHMIRHGGERKHQCSICKKAYARKYTLREHMRIHDNDRRFVCTVCGRSFVQNCSLKHHTKIHHPQVGTSLLRCKKIVPLFQVAYDWTLCRPLGTIMDFGRLCSKRPSTPETPRSASPLTESRPPTPQEAPPVQIYRPLTINKVPDIRQNALIIFEFSTAYPFVYGNNKFKCFICSQPYLDMTILKQHMQETHTFASLKRLVNNRRENILKVDVNDINCKLCHAKPKDLVELKQHLKLVHKKPVDPELHDNLIPFKLNSANGPYECVVCQESFIKVRILVIHMSVHFNNYSCEVCGSGFMTLRLLKKHLEVHETGNYPCDRCEKVFSTPYKRTLHIRGVHLKQFPRRCPFCPERFNSNYKRTIHLQDVHNQSTRVHKCQTCGRGFNLKYHLICHTRSVHMQERNQQCDVCHQRFCNKETLKRHMVIHTGEKNHKCHVCGMAFLRRKNLKDHLRLHDLGIIEESNSTLILKDDDGTDIKLKLLKVPISLDELKYDYEDSITNTCKKAFAKKFKTDKRKASMAYLRDPIALDKIDWGADNEAITLHVKTVQGSCMRDVIRRNTKADQKWKENALTIFENSYVYPFIHASNKYKCFICSKQFLEAFALKEHSLTHNIKEIREELNNRVRDKNIKVDISYVQCRICLESLPDLNTLKIHLQNHGIKLDLDFQDNLIPFKLNGHNFECQVCGESYLKIRLLIIHMSKHFNNYSCEVCGSVFISLTLLKRHLQTHETGSFPCDKCNKVFSNSAKRTLHMRGVHLKQFPRRCPICPERFNSNYQRTKHLRIVHNQTTGLFRCETCGREYDLKYHLLVHIRSVHLQERNQECPICHSRFFSKYCLSRHMVIHTGEKNFKCDVCGKAYTRKKNLREHSRTHLGQPEQPGPRTSVWQMTIAERQNAATFLEYTTIKPFYYQQGNFKCFFCNEVFPEIHSVLEHSFFHSTPDRINLLKQHLRKGKRVIKVDISNLQCRICQEKYSDLDDIRKHLNVVHKKEFNSAGNGLMAYNLSLIDGLLQCHKCTKSFNSFFLLNRHMNAHFNVVCEVCGLGFMSHQRLINHRVVHQNGIHVCDKCHEVFPTKLKLRYHVLKKHDLNNDKKIKPLKCPHCLERFSEHYRKMTHLREVHGITFTFECQVCKTVYLTRRALTEHTTKLHTQKIQCKVCGKCFGTKSLLKMHIRGHSGPKQEERQRQGALTSIWELTLSERQNASELLENTTARPFVYCRYIFKCFFCQEQYSDLKILLQHTLTHEVPEKTKILKELLPKGKRTVKVDISELKCKICQNNFSGLDDIRTHLINDHDKEFTKSGHGLIAYNLKSVDGQFSCHVCKKIFQTFILLNRHMNEHFSNAVCETCGAGFMTHRRLLQHKEIHLPGGYPCDKCPKVYTTSSNLKSHREKAHEGLIKARMLRCPHCTDRFSEHFRKLKHLKDAHGITFTYECDVCKSMFSSRRALTMHTNKFHTVKTRCQMCQKSFSCVTTLKKHMISHTGESNHVCTVCRKAYRHKKSLKQHMSAHVNGEQFTKFSCSGCGNGFPNRRDFNKHVKEWHPGSCFEYNIEKPVTLIE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-