Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_036417725.1
Location
CM071146.1:2877781-2885930[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.9e-06 0.0044 17.6 0.0 2 31 294 327 293 335 0.84
2 2 5.7e-08 6.5e-05 23.5 0.0 2 43 376 422 375 424 0.84

Sequence Information

Coding Sequence
atgcgGGGTGTGATAGTTATAtttttgggattgatattgagcgCAGTAGCGTGGGACGATGGCGATTTTGAAGTTTTCGATGTGGTGGAAGAagtaaatcaaaatttttacgaACTTATGGGAGTAGCGCAGGATGCATCGCCTTCAGAAATAAAGTCGGCGTTTAAGAAATTAACATTAAAGCTACATCCCGATAAGAATGACTCGCCTGATGCAGACGTTCAATTCAGGAACCTGGTGTCTGTTCATAACATACTTAAGGATCCAGGGAAAAGAGAGAAGTATAACGAAGTGCTCAAAAATGGTCTTCCTAACTGGCGTTCAGCTGTTTATTACTACCGCCACGTCAGGAAGATGGGTCTGGCAGAAGGCTCTCTTATCCTGTTCATTATCATCACATTTGGCCAGTATGCTGTTGGATGGGCTGCTTATGCTGAGAAGAGGTATACTGCGGAGCAAATACTTAACAGCAGAGGAAAGAAACATTCCAAAAAGTCTGGATTCGATGCAGGGCTTGCTGAAATATTGGAACAGTTGCCAAAACCAAGTATAAAAGATACTTTACCATTTCAAATACCAAGATGCATATGGTGGAGTATAACAGCTTTACCGATGGCCATTGTTGAAATGAAAAGACAAATGAAAGAAAAAGAGGAAGAGGCGAAACGACAAAAGAAGAGGGATGAAGAAGAGAAGCAGCGTTTAGAGCGTGAAGCTGCCGCGGCTGAATCCTTCAAAGCGGCCGGGGCGGGCGCGCGCAAGAGGCGGGGCTGGGTGCCGCCCGCCCGGGACCACTGCCTGCTCGACCCTGCAGACGAGCCCAGGAGTACGGGACATGAGGCACCTGCACCCACTCCCGCTCCACAAGTGATATCAGGCGGTCTATGGACGGACGACGATCTGTTGGAGCTGGTGCGGTTGGTGAACAAGCACCCGGGCGGCAGCTCCGACCGCTGGGAGAGGATCGCGGCGGCCATGTGCCGGCCCGTCGCCGAGGTCACGCACATGGCCGCCAAGCTCAAGGACAACTGCTACAAGATACCCGGACAGGAGCCTGAGGAACCTGTGCTCGTGGAACCGCCGAAGAAGGTGAAGACTCGTAAGACGGAGGAGATCAGCCCGGCGGGCGTGTGGTCCCAGACGCAGCAGAAGGCGCTGGAGGCTTCGCTCGCCAAGTACCCCAAGGGGGGCGCCGGGGACAGGTGGCAGAAGATCGCCGCTACCGTGCCCGGGAAGACCAAGGAGGAATGTATGCAAAGGTGTAAATATTTATCGGACATGGTGAAGAAACAGAAGCAGAAAGAGGAAGAAGATCAGCAGAGGGAGTCTGAGAAGATTCACCAGAGTGACGATAATGACGAGGAAAGTATCGAAAACGGAGAATCAtaa
Protein Sequence
MRGVIVIFLGLILSAVAWDDGDFEVFDVVEEVNQNFYELMGVAQDASPSEIKSAFKKLTLKLHPDKNDSPDADVQFRNLVSVHNILKDPGKREKYNEVLKNGLPNWRSAVYYYRHVRKMGLAEGSLILFIIITFGQYAVGWAAYAEKRYTAEQILNSRGKKHSKKSGFDAGLAEILEQLPKPSIKDTLPFQIPRCIWWSITALPMAIVEMKRQMKEKEEEAKRQKKRDEEEKQRLEREAAAAESFKAAGAGARKRRGWVPPARDHCLLDPADEPRSTGHEAPAPTPAPQVISGGLWTDDDLLELVRLVNKHPGGSSDRWERIAAAMCRPVAEVTHMAAKLKDNCYKIPGQEPEEPVLVEPPKKVKTRKTEEISPAGVWSQTQQKALEASLAKYPKGGAGDRWQKIAATVPGKTKEECMQRCKYLSDMVKKQKQKEEEDQQRESEKIHQSDDNDEESIENGES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01071577;
90% Identity
iTF_00859407;
80% Identity
-