Basic Information

Gene Symbol
-
Assembly
GCA_036417725.1
Location
CM071162.1:5515058-5517430[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2e-11 2.3e-08 34.6 0.1 1 45 255 301 255 302 0.95
2 4 9.2e-09 1.1e-05 26.0 0.2 2 44 309 355 308 357 0.93
3 4 1.2e-10 1.4e-07 32.1 0.0 1 43 361 403 361 405 0.97
4 4 1.8e-08 2.1e-05 25.1 0.0 2 45 412 457 411 458 0.94

Sequence Information

Coding Sequence
ATGGACAGTGACTTTGAAGACGACGATACCGATGTAGAGTTAGAGGAATTGAACCAGTTGAACGCTGTTTTAAACGCTGATGAACCGTCGACGAGCACGTCAGCGAGCCAGTCTATGGCATCTACCAGCACCGTATACCAAAGTACAAGTGTCGACCAACAGTTGGCAAAAATAGATACAGCTATCGCACTGAACAAAGAAACGGACGATAAATTACGCCGGCTAGAACACATACTAACCAATCGTCTCAGCGaatgtcaaaaaaaattaaaaaccctaGCTGACTTGGGGACAGCAAATGACAGACAAGACTCGTTCAGGTATTTTTACTGTGGCAAACCATATTTCAAAGACAAATACAATTTTCCAGCGCCTGACAATGAAGACACTATTTTTATGACTAACGCTCAAATGTATGATTTTTCTCAAGTTGGGTCAGTACCGGGCTGGACAGTCCGAGACAAGAGCCAGTTCCTTGCAGAGCTAGTCAAAATGTCTCAAAAGATAAGAAAAGATGAGCTACATTCAAAAATGGCTCAGTTACGCCGTGAAAACAAATTAaagaaagacaaaaaaaatgataatttaaTTGCAGGTTTAAGTAGAGAGATATGCAAATTGAAAGAGAAAGACCTGAATGAGTTAGCATTGCCATTGGATAAAGATTATGACTGGGACATGTTAGCTAATAAATTGAACCGAAGGCACACAGCTCAGGAATATGAATCTCTATGGAAATTGTTCTTTCATCccagtataaataaaaatccttGGACCAAAAGTGAACATAATAATTTACAGAAAATTGCTACAGATCATAAATTGCAAGACTGGGATAATATAGCTAAAAAACTAGGCACTGGAAGGACTGGTTatcaatgttttgtgtatttccGAACTAATATGACCAACCAGTTTAGTGGTAAGAAATGGTCTAAAGAAGAGGTGGAATATCTCAAGAGGTTGGTAGATTACTATAAAGAAGACAATTATATACCATGGGGTAAAGTTGCAGCATCCATGGAGAACcgaacaaaaatacaaatatacaataaatatttaaggcTCATAGGAAATAGAAAAGGCAGGTTTCTACCAGAAGAAGATGCTGTGATCCTAAATTGTATTCCCAAATTCGGTACAAATTTCAAAAAGATGTTAGCATATCTACCAGGCAGGTCTATCATACAAATACGTAATCGTTATCATGTTTTGTCAAAAATGAGAGTTTCAATGGTTTGGACGGAAATAGAAGATAGAAAACTTATTCAGCTCATGGCCAATCAAGATAGTAAtgtcactttttcaagtatatctAATTTCTTTCCTGGTAAGGATAGAGTACATATAAGGAGTAGATACCTTACTTTGGTAAAATGGATGAGACGGAATCCTAACACGGACATAGGACATGCCCCTCGAAGAAGTGCTAGAAGGCTAACCCATGGCAAAGCAACAGAAAACTTAAATAAAGCTATTGAGAATTTGAAAAATAGAATGGAAACTGTAGTTAGTTTGAAAAAACATTGTAAAATCAACAAAGATTCACCTGAATCATTCATTGATGATGCAATTATTGCTACATTATACAATGAATATATGAAAGAACTAGAAATTCAACAGAGTGAGGAAACGGTTGAAGCTCTAGAGCAACCAGATAACCCTGTTGTTTGTGGAAACTTTAATATAACAAACTTAAGTAAagtactaatatttttaaattcccaTTTAGATAAAGATACTTTCATTCAAAGTCATTACAGTGATTTGTATCTTGGTTTGGATGAGTTACAAGTCACCAGGACAGCTAATCTAAAAAGCTACTCACGGAAGAATAGTGTTACAAATATTCAACCTGGTAAAGAGAAGCCAGATGTTTGGGGTAATAATAGCTTGGGTattgtaaaaactgtattaCCTCCTCATTATGCTACAATAACGGGATGCAGGGCTTTAATGGCGTTCACATCTACTAAAAATAGATTTACAGATGATGGAGTACATATTCATGTGTTGTTGAAGAGGAACCTCACTTTACGAAGTCAATTGAACTTGCTGATGGAACGTTTTCACATATTATTCATCTGGCCTATGTTACTTTCAAATGAAGGACCTGATCAAGATACAATCCTTGCTAATACCTTAAGAGAAGCTAAATTACGCAAATCCATCAATACATCAATTGCACCATCCACCTCCAAGTTAGTTTCTTCATTGCCTCCAGTACACATTTCTGTAAAATACAAAACTTATTCCCGTAAAAAAGATATGGAGAACACTGAACAGATTGATTTAACTCATGAAACAGTGACTGAAGATTTTACAATTAAGGAAGACTTCATGGACAACATATTCACAGATTATGATTATTAA
Protein Sequence
MDSDFEDDDTDVELEELNQLNAVLNADEPSTSTSASQSMASTSTVYQSTSVDQQLAKIDTAIALNKETDDKLRRLEHILTNRLSECQKKLKTLADLGTANDRQDSFRYFYCGKPYFKDKYNFPAPDNEDTIFMTNAQMYDFSQVGSVPGWTVRDKSQFLAELVKMSQKIRKDELHSKMAQLRRENKLKKDKKNDNLIAGLSREICKLKEKDLNELALPLDKDYDWDMLANKLNRRHTAQEYESLWKLFFHPSINKNPWTKSEHNNLQKIATDHKLQDWDNIAKKLGTGRTGYQCFVYFRTNMTNQFSGKKWSKEEVEYLKRLVDYYKEDNYIPWGKVAASMENRTKIQIYNKYLRLIGNRKGRFLPEEDAVILNCIPKFGTNFKKMLAYLPGRSIIQIRNRYHVLSKMRVSMVWTEIEDRKLIQLMANQDSNVTFSSISNFFPGKDRVHIRSRYLTLVKWMRRNPNTDIGHAPRRSARRLTHGKATENLNKAIENLKNRMETVVSLKKHCKINKDSPESFIDDAIIATLYNEYMKELEIQQSEETVEALEQPDNPVVCGNFNITNLSKVLIFLNSHLDKDTFIQSHYSDLYLGLDELQVTRTANLKSYSRKNSVTNIQPGKEKPDVWGNNSLGIVKTVLPPHYATITGCRALMAFTSTKNRFTDDGVHIHVLLKRNLTLRSQLNLLMERFHILFIWPMLLSNEGPDQDTILANTLREAKLRKSINTSIAPSTSKLVSSLPPVHISVKYKTYSRKKDMENTEQIDLTHETVTEDFTIKEDFMDNIFTDYDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-