Cbil018670.1
Basic Information
- Insect
- Clanis bilineata
- Gene Symbol
- -
- Assembly
- GCA_036417725.1
- Location
- CM071158.1:20189316-20192688[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-10 2.8e-07 30.7 0.0 1 35 83 118 83 125 0.91 2 2 7.8 1.3e+04 -3.5 0.0 32 41 312 321 311 322 0.88
Sequence Information
- Coding Sequence
- ATGACCGAAGGAGACAACCATCATGATGTGTTAGAGGAGGAAATGGAACATCTGATGGAACCACACCCTGATGATCCACCATATGAGGGTGTTGAATATTTGGAAGACGAAATTATAGTTGATAATAACACAATATGCAATCCTGAAGaTTCCAAGCCGATTTTGTCAGATGAAAGTGGTCCTTCAAAACGCAAATGGCCGAAAAAATTGCCTCCAAAAGAgaggaataaaaaatatatgcaatACACTGAGGAGGATCTTCGCAAGGCCTTGGAGGCTGTGAGAAACCAAAGGATGTCTAACTCAGAGGCAGCACAGTTCTACAAAGTGCCACGAAAGACTCTCACAGCCAAGCTCAAACTGGAAGAAGAAAatGTGCCGGACGCAAACAGTAGGAAAATAGCATCTATAGATATAAAGGAGAAAGGTTGTGAAATAGAAGAACAGTTTAAAGGACGGCGCATGCGGACACGCACTCTTCGAAAAAATAACGCGCCCAGAAATAAGAAAGAAGAGAGTGCCGCGCTGCAGGAGATGAAAAAGCACAAAGACAATATTAACACTATACTACTATACTCAAATGCGTCCATGGTGAAAGGACAGTGGGGTGGTAATTACGCATGTTGCTTTTGCGAAAAAAGCTTTCCAACACCTGCCGAACTCAAACGTCATAACCTCGATGCACACGAAGACGCACACGCTAAAGCGATTCACGTGAAATACGTGTCGGACCTGATAATCAAACTGGACATCACCGCGCTTCGCTGTCTCATATGCGGGGGCAAGATCGACTCGCTAGACCATCTCATGACACATCTCAAGGAACACAACAAGACCATCCACACAGACATCAATAACCACATCGTCCCGTTCAAGTTCGAGAGTGACGTGTTGCAGTGCGTCGCGTGTCCCAAACAGTATTCTTACTTCAAAACGTTATCGGAACACATGAACGAACATTATAAAAACTACGAGTGCGTGACGTGCGGCCGAGGGTTCATCAACAAGCAGTCGATGCAGACGCACAGCTACCGGCACCAGCGGAACGTGGGCGTGTTCAAGTGCACGCAGTGTCCGCGCGAGTTCGACACGCGGCACCGGCGCAGCGCCCACGTGCTGCTGCACCTGCGCGGCAGCAAGACGCGCAAGTGTCACGTGTGCGGAGAGCGGTTCTCCTCCAGCCCGCAGGTGCAGGTGCACATGGTGAAGGAGCACGGCGCCGCGCCGCTCCAGTTCAAGTGCGACGCGTGCGACAAGACCTACACCAACGCGGGCACCTTGAACCTGCACAAGCGCCGCTACCACCTGATGCTGAGGCCCCACAAATGCACGGACTGCGAGATGGCTTTCTTCACCAAGCTGGAGCTGCAGTCGCACATGGTGACGCACACTCGCACCAAGGAGTTCCAGTGCGAGATCTGCGACAAGCGGTTCGGCACCAAGTGCTGCCTGAACCAACACATGCGCGCGCACTTCGGCATCAAGCGCTACAGCTGCGACTGGTGCCACTTGAAGTTCGCGGCGCGCTCCAAGATGAAGCTCCACATGTTGAGGAAGCACAGAGAGGTTGTGTAG
- Protein Sequence
- MTEGDNHHDVLEEEMEHLMEPHPDDPPYEGVEYLEDEIIVDNNTICNPEDSKPILSDESGPSKRKWPKKLPPKERNKKYMQYTEEDLRKALEAVRNQRMSNSEAAQFYKVPRKTLTAKLKLEEENVPDANSRKIASIDIKEKGCEIEEQFKGRRMRTRTLRKNNAPRNKKEESAALQEMKKHKDNINTILLYSNASMVKGQWGGNYACCFCEKSFPTPAELKRHNLDAHEDAHAKAIHVKYVSDLIIKLDITALRCLICGGKIDSLDHLMTHLKEHNKTIHTDINNHIVPFKFESDVLQCVACPKQYSYFKTLSEHMNEHYKNYECVTCGRGFINKQSMQTHSYRHQRNVGVFKCTQCPREFDTRHRRSAHVLLHLRGSKTRKCHVCGERFSSSPQVQVHMVKEHGAAPLQFKCDACDKTYTNAGTLNLHKRRYHLMLRPHKCTDCEMAFFTKLELQSHMVTHTRTKEFQCEICDKRFGTKCCLNQHMRAHFGIKRYSCDWCHLKFAARSKMKLHMLRKHREVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00341608; iTF_00858857;
- 90% Identity
- iTF_00341608;
- 80% Identity
- iTF_00341608;