Basic Information

Gene Symbol
kn_1
Assembly
GCA_036417725.1
Location
CM071159.1:11179862-11196530[+]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.3e-142 1.2e-138 463.6 0.0 178 387 36 263 29 266 0.98
2 2 1.3e-05 0.067 12.0 9.7 420 561 272 429 264 444 0.64

Sequence Information

Coding Sequence
atgcgGCAACAGATGTGTTGTGCCCGCGGCGGCGTAAATACGTTCGCGCCGCACCAACCACGCATCGTATTTGGACGCTTTTTGAAATTTATACAGAGCTGCTACGTCATGTCTTTGAGATTTTTTCTCAAGTTCTTCTTGAAGTGCAATCAGAATTGTTTGAAGAATGCCGGCAACCCGCGGGATATGAGACGATTTCAAGTGGTAATATCAACGCAGGTGATGGTCGACGGTCCCCTTCTAGCGATATCCGACAACATGTTTGTTCACAACAACAGCAAACACGGCCGTCGGGCGAAACGTCTAGACCCAACTGAAGGTATTGAGGCAGCGCCAGAAAACACTTCTGGTTTATACCCGCCTCTGCCAGTTGCGACGCCGTGCATCAAAGCAATATCGCCGAGTGAAGGCTGGACGTCAGGCGGATCCACAGTCATTATAGTAGGAGACAACTTCTTCGATGGACTGCAAGTGGTCTTCGGAACTATGCTCGTTTGGAGTGAGTTAATAACGTCACACGCTATAAGAGTCCAAACGCCGCCGCGGCACATACCCGGTGTGGTGGAAGTGACACTATCCTACAAAAGTAAACAGTTCTGTAAAGGCGCGCCGGGGAGATTCGTTTATGTTTCAGCACTCAACGAGCCTACAATAGATTACGGCTTTCAGAGGCTGCAGAAACTTATACCGAGACATCCCGGCGACCCGGAAAAACTGCCCAAGGAGATAATTCTAAAACGAGCAGCGGATTTAGCGGAGGCGTTATACTCGATGCCTCGTAACAACCAGCTGGGCTTGGGTGCTCCGCGCTCGCCGCCCGCCAGCATGCCCTTCAACTCGTACACGGGCCAGCTGGCGGTCAGCGTGCAGGACACTGCCGCCTCGCAGTGGACGGAAGAGGAGTACGCgcgcagcggcggcggcgggtcgGTTTCACCGCGGTACTGCTCGGCTGCGTCGACGCCGCACGCGCATGCGCACGCGCCACCTGCATCCTACCCACACCCGCAACATTACCCCGCGCCGCCCACATCACTCTTCAATACCACCTCGCTGTCTCTCGGCCCGTACCACCCGGCGAACATGAATGGCCACTTGTCATCTGACCACTATAACGCGTATAATACGAAAGATAGCGCACATTACAGTGAAAGAAATGGAAATTCTAAAAGCGCGTCTGACTGTCCGGCAAACATTCATTCCAAATGCACCGGGAGTATGAAAGGGCCCGAGAATAAAGAGGCTAAGTCGAGGAGCGCCTTTGCGGTCGTGAGACACAGTCCGCCTCGCGCGCCCAATGTTCACCACCACAATTGGCAACATCTCGCCGTTCAATGTTag
Protein Sequence
MRQQMCCARGGVNTFAPHQPRIVFGRFLKFIQSCYVMSLRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGIEAAPENTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGGGSVSPRYCSAASTPHAHAHAPPASYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDHYNAYNTKDSAHYSERNGNSKSASDCPANIHSKCTGSMKGPENKEAKSRSAFAVVRHSPPRAPNVHHHNWQHLAVQC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00036409;
90% Identity
iTF_01358676;
80% Identity
-