Cced010200.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- pnr
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010001915.1:627598-650863[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-18 9.2e-15 54.1 3.2 1 34 141 173 141 175 0.97 2 2 3.6e-18 1.2e-14 53.7 5.6 1 35 200 233 200 234 0.97
Sequence Information
- Coding Sequence
- ATGTTCGGTCTCGCGGCGCACCACCAGTACGGCGGCGGCCCTCCACCGGCACCGCCGCCACAGCCGCCGACGACCTCCGACCCGACGGTCACGGGCACCGGCGCTGCGGCGCACACGTGGCAAAATTCACCGGCGCCGGCCCATCACCACAACCGGAGTCACCACGTGGCGGTGACCGCCGCGGTCGCAGCAGCCGCGGCCGCGGCCTCCGGTCCGCCGACCAACAGCAACATTAACGGCGGCAGTGGTACCCCGGGCGGCGGACACCAGAGCGGTCCGAACGCCACGACCCCGTCGTCACCGTCGTCGGCCACGCCGCCGTACTACCAGAGCGCGGCGGCCATGATGTGGTCCAACCCGGTGTTCCAGAGCCATCAATACGACACCGGTATGGATTTGAATTTCGGAGACGGTCGGGAGTGCGTCAACTGTGGCGCCATCTCCACGCCGCTGTGGCGCCGGGACGGCACGGGACACTATTTGTGCAACGCGTGCGGGCTGTACCACAAAATGAACGGCATGAACCGGCCTTTGGTTAAGCCCGCCAAGAGATTGGTCGCATTCGAGACGGCGTCCAACAGACGTCTCGGCCTGTCGTGCACCAACTGCGGCACCCGGATGACCACGCTCTGGAGGCGGAACAACGACGGCGAGCCCGTGTGCAACGCCTGTGGTCTGTACTACAAACTCCACAGTGTCAACAGGCCACTGACTATGAGGAAGGACGGCATCCAGACGCGCAAGAGGAAACCGAAGAAACAACCCTCGTCGTCGTCGTCGTCGTCGTCCGGCAACGGGTCCGCAAACACGGAGAACAACAGGCAGTCGTCTTCCGCAGCTTTAGATCTATTAGTGAACAAACATCATACGGCGGCGGCAGCGGCGGCGGCGGCGGCGGCGGCTGCGGCGGCTGCGGCGGCGGCGTCGGCTTCGGTCGACATAAAACACGAACACTACGACGGGACGGCCGAACACTTCCTAATCCCCGGTCCGCCGGTCGGCCACCCGCACCACCACCACCACCACCACCATCATCCCCAGCTCGGCGGGTTCGGTTTCCCGCTGGCGCAGGCCCCGGGGCCGGCCCACCACAACGGCTACCAGCACGTCCTGTTGAACGGCCACGTCAACAACAAACTTATGGCGTCCTAA
- Protein Sequence
- MFGLAAHHQYGGGPPPAPPPQPPTTSDPTVTGTGAAAHTWQNSPAPAHHHNRSHHVAVTAAVAAAAAAASGPPTNSNINGGSGTPGGGHQSGPNATTPSSPSSATPPYYQSAAAMMWSNPVFQSHQYDTGMDLNFGDGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPAKRLVAFETASNRRLGLSCTNCGTRMTTLWRRNNDGEPVCNACGLYYKLHSVNRPLTMRKDGIQTRKRKPKKQPSSSSSSSSGNGSANTENNRQSSSAALDLLVNKHHTAAAAAAAAAAAAAAAAAASASVDIKHEHYDGTAEHFLIPGPPVGHPHHHHHHHHHPQLGGFGFPLAQAPGPAHHNGYQHVLLNGHVNNKLMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -