Cced019032.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- Dnajc1
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010002448.1:64703-74177[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-05 0.022 15.0 0.0 4 31 295 326 293 332 0.88 2 2 0.00019 0.2 11.9 0.1 3 34 378 414 376 415 0.78
Sequence Information
- Coding Sequence
- ATGATCGTCAAATACGGTTCAAAAATGTTAATCTTCCTTGCAGTTGTGTTGATCATCAATATTCAATCAATTTGGGCATGGGATTCAGATCAAATGGAAGTTTTTGATCTAGTTGAAGAAATGAATAATATAAATTTCTACCAGTTTTTGGAAGTTCCTGAAGATGCTAATTCATCATCAATCAGGCAAGCTTTTAGAAGAATGTCACTCTTATTACATCCCGATAAAAATGATGCACCTGATGCAGAAGCAAGGTTTAGAGAGCTAGCAGCTATACATGATGTTCTGCGTGATCCTGTGAAACGTGGACATTATGACAAAGTTTTAAGTGAAGGATTACCAAATTGGCATCATGCGGTTTATTACTACAGACGTGTTAGAAGAATGGGTTTCTTAGAAATGATTGGTATTTTATTTTCTATAATCAGCGTTGGACAATATCTTGTTGCTTGGGGTTCATATATAGAAAATAAATTTACTGTTGAAGAGTTACTAAGTTCAAAAGTGAAAAAGCTTAGAAAACAAAAAAAATATAGAGGTGATTCTGCATTACCTCCAGAATTTGATGTTAATTTACCAAAACCTAGTTTGAAAAACACACTTCCTTGTCAAGTACCATATTGGTTATGGCTATTTATACTTAAATCACCATCATTAACAACTTCAGCTATATCTTTTTTGGTCACCAAATTCAAAGAAAGAAAAAATTATCAAAATAAATTGAATTTTGAAAAACCCGAACCAGTTATTCGTGAAAGAATACGACGCCGTAAAGTTCCTTATAAGATACCAGAAATTAATGATTATATGAATAGTAATGGTGATGCAAATGGAAAACTTAATACAGAAAAAAGTGATACTCCTATGGTTGTAGGTAGTTTATGGACAGACGAAGATTTAAATGAACTATCACAAATGGTAAATAAATTTCCTGCTGGTACTTCAGACAGATGGCAAAAAATAGCTAAAGCTATGCATCGTCCAGTCCCAGAAGTTACTTATATGGCTAACAAAATAAAACAAAGCGGATACAAGTTACCAACTCCAGATGATTCAATGGATACAACCATTACAGATGAACCCAAAAAGATTAAAACAAGGGCTCCAGAAAACATTGAAACAGGTGATAGTTCCTGGACTCAAATACAGCAGAAAGCATTAGAAAATTCTTTGATCAAATATCCAAAAGGTACAACTGAAAACCGCTGGGAAAAGATTGCAAAATGTGTGCCAAAAAAAACTAAAG
- Protein Sequence
- MIVKYGSKMLIFLAVVLIINIQSIWAWDSDQMEVFDLVEEMNNINFYQFLEVPEDANSSSIRQAFRRMSLLLHPDKNDAPDAEARFRELAAIHDVLRDPVKRGHYDKVLSEGLPNWHHAVYYYRRVRRMGFLEMIGILFSIISVGQYLVAWGSYIENKFTVEELLSSKVKKLRKQKKYRGDSALPPEFDVNLPKPSLKNTLPCQVPYWLWLFILKSPSLTTSAISFLVTKFKERKNYQNKLNFEKPEPVIRERIRRRKVPYKIPEINDYMNSNGDANGKLNTEKSDTPMVVGSLWTDEDLNELSQMVNKFPAGTSDRWQKIAKAMHRPVPEVTYMANKIKQSGYKLPTPDDSMDTTITDEPKKIKTRAPENIETGDSSWTQIQQKALENSLIKYPKGTTENRWEKIAKCVPKKTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01032822;
- 90% Identity
- -
- 80% Identity
- -