Cced009152.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- rcor1_1
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010001895.1:2731852-2741829[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-06 0.0026 18.0 0.0 3 46 229 272 227 272 0.95 2 2 2.6e-08 2.8e-05 24.2 0.0 3 45 458 500 456 501 0.94
Sequence Information
- Coding Sequence
- ATGCCTACGCGTTGTGCAATTTTTGGATGTTCCAATAAAACGTCAAACAAAAATATTTCATTTTATCGTTTTCCGAAATTGAAAATTAATGCAGCATCAGATCTGAAAATGAAAATGAAGAGGCAAAGAAATGCTTGGTTGAAATCATTACGCAGACATGATAATGTAGCCAATACAAATATTAACTATATGCGTGTGTGTTCTATTCATTTCAAATCTGGTAAACCAGCATCATATCATAATGAAAACGACCCAGATTGGTGTCCAACATTAAACATGGATTTTAATGTTTCTAGTGAAAACGACATGGCTAACGATAATCCAGAAGATTTGAAAGATTGCAAACGACCAGGCCCATCTGCGAATCCTGAACCGATGGCAACAGACATCAATGATCTAATTCAGGAAAATGCTGAAAAAATTAGAGTCGGACGTGATTATCAAGCAGTAATTCCAAAGTTATTGGTACTTCCAAAACATAGGCGTGAACGGCTGAACAAAAGAGCATTGTTAGTTTGGGCTCCAACAGAAAATATTTCAGAAGATAAATTAAGTGAATACATACTAATATCAAAAGATAAATTCGGTTACAACAGCGAACAGGCTCTAGGTATGCTGTTCTGGCATAACCATGATATGGATAAAGCTCTTAGTGATCTATCAAATTTTGCTCCTCTACCAGATGATTGGTCTGCTGAGGACAAAGTTACATTTGAAGGGGCCTTTAATAATATTGGAAAAAATTTTTTACGCATCAAACAACTGATGCCTGACAAACCGATAGCTTCATTGGTAAAATATTATTATCTATGGAAAAATAAGAGAAAGAAGAACAGTCATATTGATCGACAAGCAAAAAAATTAGAAAAAGCCCGTTTGACCGAAAATAGTCAAAATGGGAGTAGGGATGGATCCAGTTCAGCTGAATCAGAGCCAGACGATAAGAGGGATTTAGGAGAAGGAAGTTCAAGTAAGACATGTTCAGTTTGTGGAGTTTTTCTTACTACACAAAACCAGACACCAAAAGGTTTAATGTGTGGTACATGTTATGAACATTTTAGGAGAACTAACGGGGGTATCAGACCAACATTAGGTCCGCCACGTCCAAACAACCGTCATTTAAATGTTGCTCGTAATAAACGTCAACCACCACGTGGAATGTATGTCAATCACGATGATCTTGAAGCTATTGCAACTGAACCAAGAAGCCAAGGTGAAAATATTTTGGTAGCAATGGATGATGAGGTTGTATCATTAAAATGCAAAATACAATCTAACAAACAAGACATTGGACAACTGCAACAGCAGATTAATCAAGATGTTGATGAATACAGAGATAATGAATCATTAATACCAAATCGTATATCCTCTCGATGGAACAATGAAGAAGTTATGCTTGCCATTCAAGGAATGCGCAAGTATGGAAAAAATTTCAAAATTATTTCTGAAATATTGGGAACTAAGACTCAAACCCATTTGCAAGCATTTTATGTTCATTATCGTAAACGTTACAGTCTTGATGGAATACTCAAAGAGTATGAAAGAGAACACCATATAAATGCAGAAATTATTGAACTTAGCGATGATGAAGATGAACAGGTCACTAAAAAAAATGAATCTATGTCTACAGTGAATAGACCTAATACACCATCATCCATGGCTTCAGGAAGTCGACTCATCAATAAACTTTCATTTTCTAATCCTAAAGCACACCAAACAGCTACTGCTGCTAAATGA
- Protein Sequence
- MPTRCAIFGCSNKTSNKNISFYRFPKLKINAASDLKMKMKRQRNAWLKSLRRHDNVANTNINYMRVCSIHFKSGKPASYHNENDPDWCPTLNMDFNVSSENDMANDNPEDLKDCKRPGPSANPEPMATDINDLIQENAEKIRVGRDYQAVIPKLLVLPKHRRERLNKRALLVWAPTENISEDKLSEYILISKDKFGYNSEQALGMLFWHNHDMDKALSDLSNFAPLPDDWSAEDKVTFEGAFNNIGKNFLRIKQLMPDKPIASLVKYYYLWKNKRKKNSHIDRQAKKLEKARLTENSQNGSRDGSSSAESEPDDKRDLGEGSSSKTCSVCGVFLTTQNQTPKGLMCGTCYEHFRRTNGGIRPTLGPPRPNNRHLNVARNKRQPPRGMYVNHDDLEAIATEPRSQGENILVAMDDEVVSLKCKIQSNKQDIGQLQQQINQDVDEYRDNESLIPNRISSRWNNEEVMLAIQGMRKYGKNFKIISEILGTKTQTHLQAFYVHYRKRYSLDGILKEYEREHHINAEIIELSDDEDEQVTKKNESMSTVNRPNTPSSMASGSRLINKLSFSNPKAHQTATAAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01499573;
- 90% Identity
- iTF_00340643;
- 80% Identity
- iTF_00340643;