Cced015429.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- Mblk-1
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010001894.1:2757716-2774003[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-18 2.4e-14 52.9 0.0 1 40 351 391 351 395 0.94 2 2 7.8e-19 2.2e-15 56.2 0.0 1 43 884 927 884 929 0.95
Sequence Information
- Coding Sequence
- ATGGGAAGAAGAAAATGGCACCAGTATCAGGATATTTTGGCGAAAAATTATCTACTGGAAGAGGAATTGATGGACCGGAGAGAATGGGTTCCCGTCAAAACGCGTAACTCGTGTGATGTGAACACGGACCCGAGCGCAGCCGATTACTCACCTGCAGAGCTGGAGCCATCGTCTGAAACGGGAAGCTTGAGCGGCGGCAGCCGCAGTGCAGACAGCCCGGAACCGGAACCGGCCGACAGCAGGCGGCCGTCGTCCGCCAGCCCGCCGGCGGGCACGTACCCGCGACCCGCCGATGACCGGTCGCCGCCGCTGCTGCCGCTGTCCGACCGAACGTCCGCGGCCGCCGCCGCCGCCGCCGCCGCAGCAGCCGCCATGGCCGCGGTCGCGTCGCTGAACAACCCGTCGCCGCCGTCGTCGTCGTCGTCGGCGGCCACCATCGCGCCGGCCGGCGGTCCTCCGTCGCCCGGCGCCCTGGACGCCGCGGCCGCCGGACTGCCCAAATGGTTGTTGGCCGCCGCCACGCTGAGACTGCAGGAGACGACGGCCGCGTCGGCGGGCGGCGGGTCGCCGCCCCACCACTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTTGACGGCTTGCATTGTCGGCAGCGGTGGCCACGCGTCGTCGTCGTCCGCGTCCTCTACGCCGCCGTGCCCCAGCTCGTCGTCCACGCCTTCATCAGAACTGAAAACAGCGCCCGCAGCCGCAGCCGTAGCCTCCGCGGCCGCCGTAAACCCGTTCACGTCAGATCTCAACACGACGGAAATGATGAACAAGCTTTGCGACCTCATACCGGCCGCGTCCACGTTCCTACCACACCAACCGCTCAACGTAAAGCCCCCCGCACTCATTAACCGGAACACGTTCAAATGCAAGAATACAAAGCCCAGTCATATGGCCGGGCGTAAAACGTATACGGAGGACGAGCTGCAAGCGGCGCTCCGGGACATCCAGAACGGTAAGTTGGGCACGAGGAGAGCGGCCGTCATTTACGGCATACCGAGGTCGACATTGCGAAACAAGGTCTATAAGATGGCGTTGGAGCGGGAAAGCGGCGGCGGGATCAGGGCGTCGGTGGGCGCTGACGACCCGTGCAAAGCGGTGGCCGCTAAACTGCTGCCCATACTGGGCGAGGATGACGACGATGACGACCGGGACACAGTGTCCGCGGGTGAAGATGACTGTGCCAGGACGTCGGCCGATATGGTGACGGACAAGGAACCGCGGCACCAGCACCACCAACAACAGCACCATCACCAGCAACACCAGCACCAGCACCAACACCACCGACACCAGACGAGGTTGTCGTCGTCGCCGTACATGACCTTCGAAAATCTGTTCCAGTTCTCGACGGAACAACAGCAACAGGCCGCAGCGGTCATGCCGACCCCCGAAACGATCCGGCTGTTCCTGCAACATTGCGCCAACAATAAACTGTTACAGCCGCAAAACAGACGAGAAAGCTATCGCGGTGACGAAAGCCTGACGGACTGCCGGTCGCCATCGCCGCCCCCGTCGACCGCCGCCAGGTTGCCGCCGCCGCCGATGGCCACGGACTTGTGGCCGACAGCAGCTGCGGCTGCGGCCGCCGCCGCAGCCCTCGACCCTCGAAAAATGGGAACGTATCTAGCGCATTTGCTGTCCACGACGGCCGGGTCCCAACCGGCAGGAATAGGTTCGCCGCGATTGCAGGCGCAAGACAGTCCGCCGCCACCGGCCCCGCCGCAATTGCCACCACAGCACACGAACGAATTTCTCAAAGGGTTCACGGTCTCGGAAATGATGCGCAAGATACTGGACGATGAACAGATGCAGCAATACAACAAGTCGGTGGCGGCGGCGGATCCGAGACGCTGGTCGTCAAACGGCTGCAACTCCTCGGAACCAATGGACACGGGTCGCAGTAACGACGACGACTCGAACCCGTCCAACGTCATACTGAGAATACCGTCGTACAAACCGGTGCCCGGAAAGAGCGGAGAATACGACCCGGCCGGCAGTAGGGAACTCCGGTCACCCGGTCGGGCCAACAGCGTCCGGAGCGATACGTCCTCCCCGCCTTCGTCGTCCGGGAGCAAACATCCGCTCAACCTGAGGGACGTGATCGCTAAGAGCATCACGCACAAATTCCAAACCTCTACCGACCAACAGCTGCCGCTGCCTATGCCGGCCGTCGAATCGCTCGCGCGGGCCTACCACCAGTACCAGCAACACCAACAGCACCATCACCATCAGGGCGTACCCGCCTCGGCCGTGTTCTCGCCCGGAAGTGCCATAGTCAGGAACCACAACAACAACAATCTACTGGACGACTGCCGGAAACGAGTACCCACGCCTACCAAACCGACTCCGGCGGCATCGCCCATGTCCAGCAGTGGCGGCGGGTTCCACCACGTGGGTGGCTCGTCGTCGTCGTCGTCCGGCTCCGCTGCCGCGGCGGCGGCCGCTGCCGCCGCGGCAGCTGCGGCCGGTGGCAAGGGCACCAGACCGAAAAGGGGCAAATACCGAAATTACGATCGGGACAGTCTGGTGGAAGCCGTGCGAGCGGTTCAACGGGGCGAGATGAGCGTACACAGGGCCGGGTCCTATTACGGCGTGCCCCACTCGACGCTCGAATACAAAGTCAAAGAAAGGCATCTGATGCGACCGAGGAAACGCGAGCCTAAGAATCCGCCGCCCGCGTCCTCGGTGTCGGCCGCCGCGATCGCCGAACAGGACCGCAAGAAGTCGTCGGCCGAATTGCCCGCGTCAGTCCGACCGGCGGACAAACCGTCGTCGTCCACGCCGCCCGCCGTCAAACTGCCCGCGCACGTGTTCCCGGTTCAACAGCCGTCCGGTCCGCTGCAGACGCCCAACGGGCTCAAAATATTTGACGCTACAGGCCCGGTGGGCCCGTACCAGCCGTCGTTCCCGTTCTGGGCCCCGAGCCCGTTCCACATGCCCATGGACTACCCGCGGAACCCCGCGACATTCTCGTCCATGTCGATGATGCAACGGATCCAGGCGGAGTCGCGGCTGCACCACCAGACCGCGTCCATCGCCAGCCTGGGCAAGAGCGCCCGCGAGGTGGCCGAAAATCTGTACGACGGGACCGACAACGGGAGCTTCCTGGACGGCATCATACGATCCAGCCTGGAGACGGGGCTCAAGTCGGCGGCCGCCATGGCCGCCGTCCAGCAAGCGGCGCACGCCAAGAGGGTCGCGGACGCCGAGGACGGCAGCCCGGACCGGGCGGACGACCGTTCGCTGCAGGAGGACGACGACAACCACGGTGACGGGGCCGCGGACCGGGCCACGCCGCCGTCGCGGGATTCGGCCACGGACAGCGAAGACGAGAAACCGCAGCAGACGCGCCGGTCGGAATCGCCGGCCGAACAGGACGACGAACGTTCGGAACACGCGGCAGCCGCCGCAGCCCGTCACGATTCGCCCGGTTCGCCCGGCCCGTTACCGACGGCCGAAAACGACGATCAGTAA
- Protein Sequence
- MGRRKWHQYQDILAKNYLLEEELMDRREWVPVKTRNSCDVNTDPSAADYSPAELEPSSETGSLSGGSRSADSPEPEPADSRRPSSASPPAGTYPRPADDRSPPLLPLSDRTSAAAAAAAAAAAAMAAVASLNNPSPPSSSSSAATIAPAGGPPSPGALDAAAAGLPKWLLAAATLRLQETTAASAGGGSPPHHYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTACIVGSGGHASSSSASSTPPCPSSSSTPSSELKTAPAAAAVASAAAVNPFTSDLNTTEMMNKLCDLIPAASTFLPHQPLNVKPPALINRNTFKCKNTKPSHMAGRKTYTEDELQAALRDIQNGKLGTRRAAVIYGIPRSTLRNKVYKMALERESGGGIRASVGADDPCKAVAAKLLPILGEDDDDDDRDTVSAGEDDCARTSADMVTDKEPRHQHHQQQHHHQQHQHQHQHHRHQTRLSSSPYMTFENLFQFSTEQQQQAAAVMPTPETIRLFLQHCANNKLLQPQNRRESYRGDESLTDCRSPSPPPSTAARLPPPPMATDLWPTAAAAAAAAAALDPRKMGTYLAHLLSTTAGSQPAGIGSPRLQAQDSPPPPAPPQLPPQHTNEFLKGFTVSEMMRKILDDEQMQQYNKSVAAADPRRWSSNGCNSSEPMDTGRSNDDDSNPSNVILRIPSYKPVPGKSGEYDPAGSRELRSPGRANSVRSDTSSPPSSSGSKHPLNLRDVIAKSITHKFQTSTDQQLPLPMPAVESLARAYHQYQQHQQHHHHQGVPASAVFSPGSAIVRNHNNNNLLDDCRKRVPTPTKPTPAASPMSSSGGGFHHVGGSSSSSSGSAAAAAAAAAAAAAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKNPPPASSVSAAAIAEQDRKKSSAELPASVRPADKPSSSTPPAVKLPAHVFPVQQPSGPLQTPNGLKIFDATGPVGPYQPSFPFWAPSPFHMPMDYPRNPATFSSMSMMQRIQAESRLHHQTASIASLGKSAREVAENLYDGTDNGSFLDGIIRSSLETGLKSAAAMAAVQQAAHAKRVADAEDGSPDRADDRSLQEDDDNHGDGAADRATPPSRDSATDSEDEKPQQTRRSESPAEQDDERSEHAAAAAARHDSPGSPGPLPTAENDDQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -