Cced015481.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- ARID3B
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010001894.1:370043-385831[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.1e-18 2.3e-14 53.7 0.0 27 89 2 62 1 62 0.94
Sequence Information
- Coding Sequence
- ATGGCCAAACGCGTATTGGATTTGTACACGTTGTACAAACTGGTCGTACAAAGAGGCGGAATCGTGGCGGTCATAACCAAAAAACTTTGGCAAGAGATAATTCGAGGACTCGGTCTGCCGCCGTCCATCACGAGCGCGGCTTTTACGTTGCGCACACAATACGTCAAGTACTTGTACGCGTACGAGTCGAAAATGAACCAGTTCAGTTCCGTGGACGAACTGAACATGGCCATCGCGGGAAATCGGCGCGAGGGCCGGCGCAACAAATCGCTGCTGTCAGAGTATTTGCCGTCGCTCCCGGTGTCCGTGGCCGCCGGACATCACATGTCCGCGTCGTTGCAAGTATCGCCGGGTTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGTTCCGTCACCTGGCCGCCGCCATCATAGACAACAGACACCGTGTCGCGGAACAAGCGGCCAGACAATTGCCGCCGCGGCCGTCGTCGTCGTCGTCGTCGCCCCGGCCGGGAAGTCCGCAGCGGCTGGTACAACAGCTGCCGCCTACGGTTTCCGCGGTCGTCGAATCGTCGCCGTTCAACGGCCACCTCCAACCGCCGCCGTATCAATCGGCCTCAATGATCGCCGCTCACCAAGCTACGGCCACTGAACACAACAATAAACAGAGAGAAATTCTTAGCATGCTAATGTGGATGGATTTGATGCGAGCCAATCAAACAGCGATTCCGAGACTTCCAATACCAAATTTGCAGCAATCCGCTCCGTCGCCGTACGCAGCCGCCGCGGCCGCCGCGCTGAATCTGTCGCCGGCCGTCGTCATGCAGAAAGTTCCTGTGCCGGAACAGTGCGAGGCGTTGAATCTGGGGAAAAAAAATCCCGCAGGAACGAATAACAACAACGCCGGCGAAAACGACGAAGAATCGCAACCACCGCCGTCGAAACGGATCAAAACCGAATGGTCGCCACCATTGTCGCTGCACAAGGTCCAGGCAGTGGCCAGTCGTCCGGCCAGCCCCAAAAACGCCGCGGCGGTCAGTCCCAGACCGACCGGCAGTCCGGTGCGAGAGTCTATTTCGTCGCCGGGACGGAGTGGCGGCGAGGATGACGACGATGACAACACTGACGCCAACAGCGACAACAACATGATCGAAATGGACATCGACGTTTCCGCCGGTATGCCTAGTGGTCTGAAAATATGCGTTTGTAAAAGAACAAAACACGGAATCTACAAAGGTCAACTCGTCAAAGTCGAGTCTACTATAAACGGAGGGGCGAAAAACACGGCTACTAGTCCCTTTATATTACGCCTGAACGGTGAACTCTACAAGGGATGTCTACAACTACAAAACAATAATAATCTTCAAAATCACAATAATGACGAGAAAAACTTTAGTTAA
- Protein Sequence
- MAKRVLDLYTLYKLVVQRGGIVAVITKKLWQEIIRGLGLPPSITSAAFTLRTQYVKYLYAYESKMNQFSSVDELNMAIAGNRREGRRNKSLLSEYLPSLPVSVAAGHHMSASLQVSPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFRHLAAAIIDNRHRVAEQAARQLPPRPSSSSSSPRPGSPQRLVQQLPPTVSAVVESSPFNGHLQPPPYQSASMIAAHQATATEHNNKQREILSMLMWMDLMRANQTAIPRLPIPNLQQSAPSPYAAAAAAALNLSPAVVMQKVPVPEQCEALNLGKKNPAGTNNNNAGENDEESQPPPSKRIKTEWSPPLSLHKVQAVASRPASPKNAAAVSPRPTGSPVRESISSPGRSGGEDDDDDNTDANSDNNMIEMDIDVSAGMPSGLKICVCKRTKHGIYKGQLVKVESTINGGAKNTATSPFILRLNGELYKGCLQLQNNNNLQNHNNDEKNFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -