Cced003480.1
Basic Information
- Insect
- Cinara cedri
- Gene Symbol
- JARID2
- Assembly
- GCA_902439185.1
- Location
- CABPRJ010000490.1:550634-569147[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-21 1.1e-17 64.3 0.0 6 89 1658 1739 1654 1739 0.93 2 2 3.4 9.6e+03 -2.8 0.0 49 63 1753 1765 1748 1780 0.75
Sequence Information
- Coding Sequence
- ATGTCCTCTTCGAAAGGGATCGACCCGAAGAAACGCAAACTGCTGACCAGCGAAGAAGCCCTTCTCGAAGCGAGTACCAAAAAAATCAAGGTACAAGCCCAGAGAAAGTTTGCCCAAAATGCTGTGACGCCCACCAGTACTCCACAAAAACTTGTTCAAACTCCTATCGTACCCAATAATCCAATAAAGCCACCAATAAAACGACCAAATACCGAGGATTTCCTTACTTTTCTTTGTTTTAGAGGCACAAGTTTATTACCACCACGATTAGATTTCTTTAATAAGCCTCAACGCTCTCTATCGGCTCAAGAAATTTCTGCTGGAAAAAAAAGAAGAAAGAGCACCCCTATACTGCCAGCGTCTAGTTCAAATAAAAATGTTAATGAATCTAATGAAAGAAAAAACATTAGACAGTTACCGCAAACTAAGTATTCATTGACAAAATTAGGACAAAAAGTTATAGGGCGAAATTTGGTAAGATGTAGTTCGAGGTACTCTTCTCGACAAGAATCTCTTACCTTGCGCCAAATAGCCCTTCACCATGGTTCAAAGATAAAAAAACCAAAACCAAAACCAAAAGTTAAAAAAGTTCCAGTTGTAGAAAATGTCAAAAAAGAATTAAAGAAAAGTGGTAAACAAGTATCGTTAGATGGTAAGCAAATACAAAAGCTGAAAGGTCGTATAACAAGATCAAACTCTGTACCAAGTATCTTTTATCCTGCAATAAATCAACTTCGAGATGATAAAGGTAAATGGATCAAGGGAAATGTTAAACCCCCCTCTTCAAAATCATCAGAAGATTTTAAGGATTCCAAAGATGTTGAAGAAGAGAGACCATCGAGAAAAAAGACTGTATCAAAGAATTTAGATTATAGTATCAACAATTCCGGTAATTTGAAACGAAAGACAAGTGAAAATAAATGTAAAGTAGTGAATAAAAATGAAAGAAAAACTAGAAGTTTAGTGACTAAACATAAGAGTGATGACCAAGACAATTATGTTGTTCCTGATAAGAACTTGAGGAATGTATTGAAGATAAATAAAGCAAATAGCTTAATTGAAACTAAATGTTCATCTGATGTAAAAAGAAGAACTGCTTCAGTTGACAACATGAAAACAATTCGTGCTGGTAAAGATTCAATCAGTTCAACTCGCTCAAGACCTCCTAGAAGAACGAAAGAAGCTGCTACTTTATTTATGGAAATGTTACGAAAAGATATGCGGTGCCCTGATGAACAAGAAGAAGATGAAACATCATCTGTAGAAAGTTTCCCTGATCTTCCCAATACACGCATAAATGAACAACGGGAACGTGAGTTGAAAGGATTTTCTAAGAAACACTCAATTCATAATGTACAGCAAGCCAAACAAAGTTTATTTGAAAATAACGATGATCAATGTTCGCTAATAATGGCTGAAAACAAAAAGACTGTAGTTGATAAAAAGACAGTTAAAGAGAAAAAAAAAGTCAAAACGAAAACTTCAGCATCTAAAATGCCAAAAGAAGTGACTGAGACAATTGCCATTAATGATGACGGGGGAACATCTTCGTTCAAAAGGAATTTGAGACCTCGCCGCTCTTCTACAATGCTAGATGATTATATTATTATGACTGATTCGGAAGAGGATTTTGAGAAACCTGAACCTGTAACGGTACCGAAGAAATGGGAATCCTCTAAACCGATTCCGAAGACAACAACAACGGCGGAGGACCCCAAATCTCAAAAAATTAAATTTAGTACTGAAGAATCTGCTAAAAAAAATCTTAAAATTAATAAGACTGACTTGAAACCGAAAAAAGATTTAAGTAAAATAGATTCTGAAGTGATTAAAAAGAGTCTTTCTGAAACTAAGTCAAAAAATACTTTAGTAAAACGCCACAAAGAGCTTGTAATCAAGAATAATAAAAACACTGCTGCCGACAAGAAAATTGAGAAATCGTCAAAAAATAAGACTGAATCCCCAATAGTTGTTAATGTAGAACCGAAAACTACCGGCGAAAGTTCGAAAAACTCCGGAAAAAAAGTGCCACTATCAAATAAGCAGCAGCAATTGGCAAGGAAGGAGAACGCCTCGAACAAGAAAAAATCCACATTAGATTTGTACAACAACAATAACTATAATAATACCAAAAAGTCGTCTACTGTACCGTCGTCAGTGACCACTTCGTCTTCCATGTTTAACAGTACTACTAGTCAAACAAAAGAAGAGCTTTTGGAACGCATGGCCAAAAATTTCGAAGTGAAGCCTACCGTTTGCAGATTGCAGGACGACGGGAAAGCGACAAAAAAACCAACGACGATTACGTCGACGAAAGTGGAAAACAACTCCGCCGTGGTGGAAAAAAAAATTGAAAACGGCAAAACGATGAAGAAGTCGTCGTACAGCGCCGTCACGGTGGACAGAAAAATAAAGAACAGCGCTGTAATCGCGGGAGAAAAAAAGGCGCAGAACGCCGCCAGTAGTATGATGGTGTCCGGTGGCACGGACTCAGCGTTGGAAAATCAACAGGATGTCAACAATGAGGCCAAAGGAAAAATGGCAGCCAGTGACACGCATCCCGTAAAACTAGAATTGAAAGTCTCGAAAACGGAGAACGTGCAGACGAAAGAGGAAAACGTGCAGGCGATAGAGGAAAAGGTGCAAGCGAAAGAGGAAAAGGTGCAAGCGAAAGAGGAAAAGGTGCAAGCGAAAGAGGAAAACGTGCAAGCGAAAGAGGAAAACATGCTGCTGGCTGGTACGGGAAAAATGGAAAACCTCGCCGTGGTCGTCAAGGTTGATAAAGCTGAATCTACGTTGATGCCGTATTGCGACACGGTGCAAAAATTGGAAAACGTGGTGTTCCAGTCACTGACCAAAGACTTGTTTTTGCAGGACAATCATAAAGATATCAAGATCGCCATGCCCGAGTATCTGTCGGGAAATAACTTCCAACTGTCCAACCGGTTCAAACAGGACGACGGCCTGTCGGTATTGTCCGAAATTTGCAGTGCCCTGCCCAGGTTCAACGAACCGTTCGTGTCTAACAGGCAACATTTATTTAACAACAAATTACCGGTTTTATCTGCCGACAGTGATTTCGTTAAGCACGCGAACCTGCAGCACACGCCCACTCTGGTACCTGTGCCGTTGGCCGTCGGAGTGTTGGACCCGAAGAAAACAGAAAAGCCGTCGGTGTTCCCGCCGTCAACGCTGCCGCCGCCTCCTCCTCCGCAGCAGTTGCCGCCGCCACAACCGCCGTCGTTCGAAAGTCGGACAGTAAAAATCGTCAACTTGGCGCGCGGTAACAACAGCGCCGTTGCCGGTACCTGTAACGACAAAAAGGACGTAGGCGCGTCGTGGAAACAGTCGATCAAAGACGTCAAATTACAGAAAAACGGGCTGTTGTCCGGTGCTGCCGCCACCATCGTCGCCGCGGCAGGCAGCAACTCGTTAGCCTGGGGTGCCAAGAGGAAACAACCGTCGAACGACGATCAAACGGTGCCACCGAAAACACCCGCCGATATCGTTGTAGACGATACAAAGAATAATAAAACGGCAACCGCCGGGGCGGGTGAACGAAACTCTGGGAAACAGCCGGCTGTGTGGGTGAACGGCGTCACGGAAAAGAAATCATCGGTGAATTCGTGCCAAAAGACTTGCTGCGGCGAATCGAAACCCACCGAAATGTTTGACAGTGTCAAAAAGACGCCGGTGGTCAACAGTAACTCGTCATATTTGGCCAAGACGACCATACTGAACAGTACGAAATACGATTTGAAATTCGAAAAACGTTCCACGGCGACGGTGGCGGTACCGATAGCGGCGACGACGACGACGGCTACTCCCGTCAGCGTAGAGAAACATCACCGCAAAGACGTGGTCGGCGACGTGTCGTCTTCCGACGACCAGAGTCCCGAAAAGAAAATCTTCAATCAGCGACGGCTGTCCACCAATCAGTCGTGTAGCGGAAACAGTTCCGACGCTTTTTCGCCCGACAACGAGACGAGTGTTTACGCTTTCCAACCAGACTTGCCAGTGGCCAGCACGCCATTTCGCCGAAACAAACCCCATTCGCCCGCCAAGTCCAGGACGGTCTCGCCCAACACGTCTATCGCCGTGAACTTCGAAAACGATTCGACGGAGGAAAAATCTCACCAGTCCGCCGTATCGTCGACGACGGACGTCGACAGTGAAGACGGACGATTATTCTACATTCCTTTGCCGGCCGGCGTTCAGGCCCAACCGTTGATCCAGGGCGTAACAGTCAAACTGGGCACGGAGGGGCCACAAAATAAATTGGTGATGAGCGCCAAGCTGGTGACCAAACCCCCAGCGTCCACCATACCCATCAGTTCCATATCGCCGAAAACTGATCGAAAAATCAAGCCGTTGTGCTCGACCAAAATCACTAACAGCACCACTCCTGTCGGAACTGTGCAACCAACTACCCGATCTGTTCAGCCCCCCAAATGTAGTCCCTCGACTTCGAAAGAAATGTTACCATTACAGTCACCGTCACAACCACAATTACAGGACGAAAAAGATGAAAAGAAACGGTTACAAAAAACTACCACGACTAATACTACTGCCACTACTACTAGTACTGTTAAGGAATTTAAAAAATCGTCGATATCATCATCGTCCCCAGCCTCTACTGCCAATAATAAAAAATCGAAAAAGACTGAAAAACACATAGTTAACAATAAGAGAAAGTCCAGTGAGAAAGTAGCTTCGAAAAAAAAGTTACTGAGAGAAGAAACCGCTGAAATGGTTGAAGCACCTACATTTTATCCGTCTGAAGAAGATTTTAAAGATCCCTTGGAATATTTTGAAATCATCAAGCCAGTTGCCCAAAAGTATGGTATATGTCGAGTCGTGCCGCCACCTAGTTTTAAGCCGGAGTGCAAAGTCAGTGACGATATGCGGTTCACGGCATACAACCAGTATGTACATAAGATGATGAACCGTTGGGGTCCAAACGTCCGCGAAATGATGGCCATGAAAAAGTACCTGAAAACGCAATCGATAATGCTGTCTAATCCACCGCTAATTGGTGGCATGGAATTGGATCTGCCAAGACTTTACCACACGGTCCAAGAACTCGGTGGCCTCAAGGAAGTAATCGAGTTGGATAAGTGGTCTCGCGTGGCCGATCTGATGAAAATACCAAAAAGTGCCCAGGATCGTGTCACTAAACTAGACGATATATACTGTAAATATCTGTTACCGTATGACACGCTTTCACACGAGGAACGCCAAAAGTTAATCACTGAAGTAGACAAAGAGTGGAAACAGATTTGCAAGAAAGGTGGTGATACAGAAGACGAATTGTACGATGACGTCAATGATTGCATAACAAAGGGTCGGAGCATCGCGTTGAGCGCGTATTACCGCGTGGCCCGCAACACCGTTGCCATGTGGTTCAGGGAACAACAGCAACAGCCCGCGCAAGGCGGCGGCGGCGGCGGAAATTCGTCCATCACCAACAACAGCAAGCTGGCCGCGGCCGCGGTCCGCGCCGAAGACGTGGAGACGTCCTACTGGAAACACGTGCAGGACAAAAAGAACCACATATGCGTGCTGTCCGGGTCGATTGACTCGGGGACCGAAGGTTACGGGTTCCCGACCGCCAAGACGGCCACGTTCACCAAACACCCGTGGAACCTAAAGGTGCTGACCAACAACCCGGTGTCCGTGCTCAAGTCGCTGGGCCCGGTGATGGGCATGACCGTGCCCACCATACACATGGGCATGGTGTTCTCGGCGTGCTGCTGGTACAAGGACCCGCACGGGCTCCCGTGGATCGAGTACCTGCACACGGGAGCCGACAAAGTGTGGTACGGCGTGCCGTGCGCGCGCAGCGACCAGTTCCGGACGGCCATGAAGCGACTGTTGCCCAGGGCCGTGGCCGAGGGCGAGAACCACCACACCTGGCTGGCCGCGGACAGCGGCATGGTACCGCCCGGCCGGCTGCTCGAGCACGGCGTCCCGCTCACGCGGACCGTCCAGAACCCCGGCCAGTTCCTGATCGTCATGCCGCGCGCCTACACGTGTAACGTGTCCACCGGCTACGTCATCTCCGAGAGCGTTTATTTCACGCAGTCCGGGTGGCTGAACGACGCCGAAAGGATTTTCCAGGAATTGCAGAGAAACTGCGAACCGGCTGCGTTTTCGTTCGAAAAGTTACTGATAAACATGTCTACCGATTCTCGTACACCGCACAAAGTACTCAAACAGTTACTGAATATATTGAGCAACACGAGAGACTGCGAAGTGGCGCTCAGGAGTCAGCTGGTCGAGGATTTGGGTCTGAAATCGTCCGAACGTATTCGAGTGCCGATATCCAAGTCCAGCGAACAGATCGACGATTATGAGTGTGACGTGTGCCATTCAATCCTTTACATATCAATGGTGAACAACTCGCACGACGATTGTGATTATTGTCTGAGACACGGCATTGAGATTTTGTCGAAAAAACACAATCAACTCAAGTACTGCAAGTTTATGTATACGTTCGATGAGGCCGAGTTAGATTCAATATTGGTGAAACTGCGCGAGAGGATCGATTCGAAGAAAAAGAAAACTTCGGCAAAGAGTTGA
- Protein Sequence
- MSSSKGIDPKKRKLLTSEEALLEASTKKIKVQAQRKFAQNAVTPTSTPQKLVQTPIVPNNPIKPPIKRPNTEDFLTFLCFRGTSLLPPRLDFFNKPQRSLSAQEISAGKKRRKSTPILPASSSNKNVNESNERKNIRQLPQTKYSLTKLGQKVIGRNLVRCSSRYSSRQESLTLRQIALHHGSKIKKPKPKPKVKKVPVVENVKKELKKSGKQVSLDGKQIQKLKGRITRSNSVPSIFYPAINQLRDDKGKWIKGNVKPPSSKSSEDFKDSKDVEEERPSRKKTVSKNLDYSINNSGNLKRKTSENKCKVVNKNERKTRSLVTKHKSDDQDNYVVPDKNLRNVLKINKANSLIETKCSSDVKRRTASVDNMKTIRAGKDSISSTRSRPPRRTKEAATLFMEMLRKDMRCPDEQEEDETSSVESFPDLPNTRINEQRERELKGFSKKHSIHNVQQAKQSLFENNDDQCSLIMAENKKTVVDKKTVKEKKKVKTKTSASKMPKEVTETIAINDDGGTSSFKRNLRPRRSSTMLDDYIIMTDSEEDFEKPEPVTVPKKWESSKPIPKTTTTAEDPKSQKIKFSTEESAKKNLKINKTDLKPKKDLSKIDSEVIKKSLSETKSKNTLVKRHKELVIKNNKNTAADKKIEKSSKNKTESPIVVNVEPKTTGESSKNSGKKVPLSNKQQQLARKENASNKKKSTLDLYNNNNYNNTKKSSTVPSSVTTSSSMFNSTTSQTKEELLERMAKNFEVKPTVCRLQDDGKATKKPTTITSTKVENNSAVVEKKIENGKTMKKSSYSAVTVDRKIKNSAVIAGEKKAQNAASSMMVSGGTDSALENQQDVNNEAKGKMAASDTHPVKLELKVSKTENVQTKEENVQAIEEKVQAKEEKVQAKEEKVQAKEENVQAKEENMLLAGTGKMENLAVVVKVDKAESTLMPYCDTVQKLENVVFQSLTKDLFLQDNHKDIKIAMPEYLSGNNFQLSNRFKQDDGLSVLSEICSALPRFNEPFVSNRQHLFNNKLPVLSADSDFVKHANLQHTPTLVPVPLAVGVLDPKKTEKPSVFPPSTLPPPPPPQQLPPPQPPSFESRTVKIVNLARGNNSAVAGTCNDKKDVGASWKQSIKDVKLQKNGLLSGAAATIVAAAGSNSLAWGAKRKQPSNDDQTVPPKTPADIVVDDTKNNKTATAGAGERNSGKQPAVWVNGVTEKKSSVNSCQKTCCGESKPTEMFDSVKKTPVVNSNSSYLAKTTILNSTKYDLKFEKRSTATVAVPIAATTTTATPVSVEKHHRKDVVGDVSSSDDQSPEKKIFNQRRLSTNQSCSGNSSDAFSPDNETSVYAFQPDLPVASTPFRRNKPHSPAKSRTVSPNTSIAVNFENDSTEEKSHQSAVSSTTDVDSEDGRLFYIPLPAGVQAQPLIQGVTVKLGTEGPQNKLVMSAKLVTKPPASTIPISSISPKTDRKIKPLCSTKITNSTTPVGTVQPTTRSVQPPKCSPSTSKEMLPLQSPSQPQLQDEKDEKKRLQKTTTTNTTATTTSTVKEFKKSSISSSSPASTANNKKSKKTEKHIVNNKRKSSEKVASKKKLLREETAEMVEAPTFYPSEEDFKDPLEYFEIIKPVAQKYGICRVVPPPSFKPECKVSDDMRFTAYNQYVHKMMNRWGPNVREMMAMKKYLKTQSIMLSNPPLIGGMELDLPRLYHTVQELGGLKEVIELDKWSRVADLMKIPKSAQDRVTKLDDIYCKYLLPYDTLSHEERQKLITEVDKEWKQICKKGGDTEDELYDDVNDCITKGRSIALSAYYRVARNTVAMWFREQQQQPAQGGGGGGNSSITNNSKLAAAAVRAEDVETSYWKHVQDKKNHICVLSGSIDSGTEGYGFPTAKTATFTKHPWNLKVLTNNPVSVLKSLGPVMGMTVPTIHMGMVFSACCWYKDPHGLPWIEYLHTGADKVWYGVPCARSDQFRTAMKRLLPRAVAEGENHHTWLAADSGMVPPGRLLEHGVPLTRTVQNPGQFLIVMPRAYTCNVSTGYVISESVYFTQSGWLNDAERIFQELQRNCEPAAFSFEKLLINMSTDSRTPHKVLKQLLNILSNTRDCEVALRSQLVEDLGLKSSERIRVPISKSSEQIDDYECDVCHSILYISMVNNSHDDCDYCLRHGIEILSKKHNQLKYCKFMYTFDEAELDSILVKLRERIDSKKKKTSAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -