Clec000577.1
Basic Information
- Insect
- Cimex lectularius
- Gene Symbol
- stc
- Assembly
- GCA_000648675.3
- Location
- NW:1477486-1486303[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 1.1e+04 -4.1 1.6 15 19 324 328 323 328 0.81 2 13 0.0072 41 3.7 19.4 4 18 371 385 359 386 0.90 3 13 0.78 4.5e+03 -2.8 1.2 6 10 412 416 411 416 0.90 4 13 1.8e-08 0.00011 21.6 12.2 1 18 422 439 422 440 0.98 5 13 8.9e-08 0.00051 19.4 14.5 1 18 485 502 485 503 0.97 6 13 2.9e-05 0.16 11.4 18.2 1 18 544 565 544 566 0.88 7 13 0.0014 8.3 5.9 11.3 1 11 603 613 603 625 0.87 8 13 3.8e-09 2.2e-05 23.8 14.8 1 18 630 647 630 648 0.97 9 13 1.2 7.1e+03 -3.4 1.2 6 10 677 681 676 681 0.86 10 13 1 5.8e+03 -3.2 5.6 14 19 700 705 693 705 0.78 11 13 0.49 2.8e+03 -2.2 2.9 9 18 723 735 721 736 0.68 12 13 2.1e-05 0.12 11.8 12.7 1 16 741 755 741 766 0.88 13 13 0.58 3.3e+03 -2.4 12.8 4 18 775 793 773 794 0.85
Sequence Information
- Coding Sequence
- ATGGACAACTGGGGATGGAATGGCGCCTACTCCGTGAGGCAGATGATGGACCCCAGCGTATCAGGGCAAGACAGCTATTACAACAGTGGTACGCATTATTTCCAACAGTCTCGCCAGTATGAGACGTTCGGGTCCAACGTCATGCCTCCACCTGGTTTCGCCGGCCAGGGAAGCATCAACCAGAGCAACGAGGGGTTTTACGACTGTCACAATGATTACAACCAGTATGGTCAATACCAGGGGAACTATTTGCCGACTATGGTTTATTCGAGCAGCAGCGTGCCGAACAGTAATAGCcAATGGTATGATGGCAACTTCATGAACAATTATAGTAGCGATGGAAGGGGTTTCACTAGGGCACAGACATCTGGCACAGAAACCAGGGAGATCGGCGCGCCGTGGATGGACTTCATGCCTTCAACATCGAACCTGATCAACAAGCCGGCAAGCGACGCCGAACGGAACACGAGGCACAAAGGTCGCAATGACAGGATCAAATTTAACCCAAAACAGTTTCAAAAGAATCAAAAACTACTGCAACAGCAAAAGGTGAACAATGTCGGCCTGAATCAAAACTCAAAGCCGAGAGACAATTGGGAGGCGAAACCTTACAATCGTAAGAAGCAAAACACAGAAGCGGAATATTTCTCACatgatgaCGCCAAAGTTATTTTGGACAATATAGAAGAATCGTCACAGTTGGAGAACAAAGGACGTCAGAATCAAAAgaaaacAAACTGGAGGAACAACGGTAAAAAACAGTGGCGGAACAAGCGTGCCGACAACGCCGTATGCCAGAGGGAGAGGCTGATTGAGCAGCTTGTGAGCGGGACGCTCGAGTGCCTCGTCTGCTGCGAGCGCGTCAGGCACCAGGATTCTGTCTGGTCGTGCTCGAACTGTTACCACATATTCCACCTCTACTGCACTGTAAAATGGGCTTCCAGCTCGAAAGATGATAACGGTTGGCGGTGCCCAGCGTGTCAAAATATAACAAAGTCTATACCGTCTGAGTATACGTGTATGTGCGGAAAAGTGCAAAGCCCTGAATTTaTACGCGGTGAGACGCCACACTGCTGCGGGCAGATATGTGGCAGGAAGAAGGACTGTCCGCACGGTTGTACGATACTGTGCCACCCAGGCCCATGCCCGCAGTGCTGCGCCAACATCAAACGTTCCTGCGGTTGCGGCCGAACCAACAGAACCGTCCTGTGTTCTTCGACCGTTACGATCGAGTGCGAATCCGTATGTGAGAAGACACTTAACTGCGGCGTCCACGCATGTAACCAAATATGCCACCAGGGTAACTGCAGTCCCTGCGATAAAAAAATAGACCAAGAATGCTACTGTGGGCAGAATAAGAGGACTTCGGACTGTGACGGATCATTGATACCACCCGAGATTGGCGGCCCAACTCAGTACGAGTGCGGGTCTCGCTGTATGCGCCGGCTGTCATGCGGGTCACACGACTGCCCCTTACTCTGCCACCCGGGGCCTTGCCCGAAATGCGACCTCGACCCTGAAGTACTCAGGCGATGCCCGTGCGGCGGGATGGAGATACCAGAAGGGAGCAGGACCAAATGCACTGACCCTGTACCGCTATGTGGGAAGACTTGCAACAAAATACTACAGTGTGGCCCCGAAGGTGAGCGTCACTGTTGTAAGAGCAGTTGTCACGAAGGCGACTGTCCACCTTGTGAGCAAGTCTCTAAAGTAAAATGCCGATGTGGCCACATAGAAAAGAGCGTACCCTGCATCGAGCTATCTTCAAGCATTCTATGCCAGAAACGCTGTACTAAGAAACGGTCATGTGGGAAGCACAAGTGCAATCAGGTCTGTTGCGTAAGCGAGGAACACATTTGCCCCCTTCCTTGCAACAAGAGCCTCAACTGCGGTCGGCACAAGTGCGAACGTCTCTGCCACCGTGGCCACTGTTCGCCATGCCTCGCTGCCAGCTTTGAAGAGCTTCATTGCGAATGCGGTAAATCAGTGATACTCCCTCCAGTCCCTTGCGGCACTAGGCCGCCTGAGTGCAATGAGCCTTGCACGAGGAGCCATCCTTGCAACCATGCGCCGTTGCACAACTGCCATTCGTTCCCCGAGTGCCCGCCGTGTTCTGTACTCACGACAAAATACTGTTTCGGTGCTCATGAGatGAGGAAAACGGTCCCATGTCACTTGGGTGAGTATTCGTGTGGACTGCCGTGTGGGAGGCCATTGGCTTGTGGACATAAGTGCAACCGAAGGTGCCACGATGGAGCCTGCCTCGGACCCGAAGATATTTGCGTGCAGCCGTGCACGACAATCAGGGAGGGCGGGTGCGACCACCCTTGCGCGAACCCGTGCCACCCTGATAGGCCTTGTCCTACGAACACCCCGTGCCTGGCCAAGCTCAAGGTCACGTGTGAGTGCGGACGACGTTCTGTCATCCGTACATGCACAGAAAACCACTCCGAGTACCAGCGCATCGCCACTTCCCTCTTGGCGAACAAGATTGCCAATGTACGCCTTGGCAATACCGTCGAGGCCTCCGATATGTCGTCCATTGCTAAAAAAATGAGCCTTAAAACaCTTGAGTGTAATGAGGAGTGCCGGAAGTATGAGCGGAACTTAAGGCTGGCGGTGAGCCTGCAGATCGCAAATCCGGACCTGAGCTCCAAGTTCAGCCCTCGTTACTCCGACTCGATGAAGGCATGGGCAAAGAAGGACTCACGCTTCTGCGAAATGGTTCACGACAAGCTGACCCAGCTCGTGCAGCTTGCAAAACAGTCGAAGCAGAAGAGCCGCAGCTACTCGTTCCCGTCAATGGGAGCTGTGAAACGGCAGTTCGTTCACGAATACTGCGAGCACTTCGGCGTCGAGTCAGTCGCCTACGATCCCGAGCCCAACCGCAACATTGTCGCGACGGCTTACAAAGAAAAGtgttggATGCCGAGTTATTCCCTGATGGAAGTCGTACAGCGTGAATCAGGCCATCGTAAAGTCCCATCCCTACTTCCCTCACTCAAGAAAGATGTACCCACCaaGGAGACAACTCGATTGGTGCCTGTTAAGAAAGTGCAGCTTCAACCGCATGTTCTGGCGAAACACGAGCCTGACCTCGGCGACAGCCCTTAA
- Protein Sequence
- MDNWGWNGAYSVRQMMDPSVSGQDSYYNSGTHYFQQSRQYETFGSNVMPPPGFAGQGSINQSNEGFYDCHNDYNQYGQYQGNYLPTMVYSSSSVPNSNSQWYDGNFMNNYSSDGRGFTRAQTSGTETREIGAPWMDFMPSTSNLINKPASDAERNTRHKGRNDRIKFNPKQFQKNQKLLQQQKVNNVGLNQNSKPRDNWEAKPYNRKKQNTEAEYFSHDDAKVILDNIEESSQLENKGRQNQKKTNWRNNGKKQWRNKRADNAVCQRERLIEQLVSGTLECLVCCERVRHQDSVWSCSNCYHIFHLYCTVKWASSSKDDNGWRCPACQNITKSIPSEYTCMCGKVQSPEFIRGETPHCCGQICGRKKDCPHGCTILCHPGPCPQCCANIKRSCGCGRTNRTVLCSSTVTIECESVCEKTLNCGVHACNQICHQGNCSPCDKKIDQECYCGQNKRTSDCDGSLIPPEIGGPTQYECGSRCMRRLSCGSHDCPLLCHPGPCPKCDLDPEVLRRCPCGGMEIPEGSRTKCTDPVPLCGKTCNKILQCGPEGERHCCKSSCHEGDCPPCEQVSKVKCRCGHIEKSVPCIELSSSILCQKRCTKKRSCGKHKCNQVCCVSEEHICPLPCNKSLNCGRHKCERLCHRGHCSPCLAASFEELHCECGKSVILPPVPCGTRPPECNEPCTRSHPCNHAPLHNCHSFPECPPCSVLTTKYCFGAHEMRKTVPCHLGEYSCGLPCGRPLACGHKCNRRCHDGACLGPEDICVQPCTTIREGGCDHPCANPCHPDRPCPTNTPCLAKLKVTCECGRRSVIRTCTENHSEYQRIATSLLANKIANVRLGNTVEASDMSSIAKKMSLKTLECNEECRKYERNLRLAVSLQIANPDLSSKFSPRYSDSMKAWAKKDSRFCEMVHDKLTQLVQLAKQSKQKSRSYSFPSMGAVKRQFVHEYCEHFGVESVAYDPEPNRNIVATAYKEKCWMPSYSLMEVVQRESGHRKVPSLLPSLKKDVPTKETTRLVPVKKVQLQPHVLAKHEPDLGDSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -