Clec005060.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Cimex lectularius
Gene Symbol
nfxl1
Assembly
GCA_000648675.3
Location
NW:1508518-1516472[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.13 7.5e+02 -0.3 0.4 4 10 208 214 207 214 0.95
2 20 7.6e-07 0.0044 16.4 15.0 1 19 222 239 222 239 0.99
3 20 2 1.1e+04 -5.3 2.2 10 13 246 249 245 250 0.71
4 20 1.3e-07 0.00076 18.8 14.9 1 18 275 292 269 293 0.85
5 20 0.34 2e+03 -1.7 1.2 5 10 317 322 317 322 0.91
6 20 9.5e-10 5.4e-06 25.7 15.3 1 19 328 346 328 346 0.99
7 20 6.9e-07 0.004 16.5 12.2 1 18 381 398 381 399 0.98
8 20 2 1.1e+04 -4.1 0.9 1 4 408 411 408 411 0.95
9 20 2 1.1e+04 -5.0 2.0 6 10 423 427 423 427 0.95
10 20 8.1e-08 0.00047 19.5 15.0 1 18 433 450 433 451 0.97
11 20 4.4e-11 2.5e-07 30.0 13.8 1 19 460 478 460 478 0.98
12 20 0.41 2.4e+03 -1.9 1.1 5 10 505 510 505 510 0.94
13 20 0.00029 1.7 8.1 8.3 10 19 524 533 521 533 0.92
14 20 0.00018 1.1 8.8 6.5 1 12 542 552 542 552 0.96
15 20 2 1.1e+04 -4.6 2.1 14 18 579 583 579 583 0.87
16 20 0.0032 19 4.8 4.7 1 12 620 631 610 631 0.87
17 20 2 1.1e+04 -7.3 3.8 6 10 648 652 645 652 0.64
18 20 1.2 6.6e+03 -3.3 17.1 1 19 658 675 658 675 0.93
19 20 1.5e-06 0.0088 15.4 10.5 1 16 720 734 720 740 0.89
20 20 1.2 6.8e+03 -3.4 0.8 5 10 767 772 767 772 0.86

Sequence Information

Coding Sequence
ATGTCACGCCCGGGAGGCAGGGGCAACCCTTGGAACCGCTCCGGTGGCGACAGGAAGAAGAGGGTCGAGAACGGCTGGACGGACGGCCCGTCCCGGAGCCCCGCCGTCCCGGATGCCATGTCCGCCCAGAACAAGTTCCAAGAGGCTCATCTCAAAATGCAGAAATCCGTGCAGAAATACATGCGACAAGAATACGAGTCCTCTTCGGAGGAAGAGGAACTCGAATCGGACAACATCTTAGCTTCAgtacttaaaaattacaacagcTTCGGTGGCAAGTCTGAGGATCTTGGGAGGACGCAGAATGTGTTGGAGAATTCGTTTCGGTCTGGGTCGGCAGTCTGCCTCATTTGTATAGCACTCATCAAAAGGACAGATTCTATATGGTCGTGCAGATCTTGCTAtggatttttccatttaaactgCATACAAAGGTGGAGTAAAGACAGTATTACACATCAAAAGGTTGCAGAGGAAGAAATGCCgtcaaataaaagtaaaagctACTGCTGGTTTTGccCAAAATGTAGGGAAGAATATGATTTGTCAAGCATTCCAACAAAATACGAATGCTTTTGTGGTAATAGAACTGACCCAGTGTTCCAGCCGTGGTTAGTGCCACATTCCTGCGGTGAAATTTGCAATAAACCACTTCTGCCCGAATGTGGACATGCTTGCTTGCTCCTTTGCCATCCAGGGCCTTGTCCGAAGTGCCCCAAGATGGTGAGAACAAAATGCCACTGTGGAAAAAGTGATTCTATTCCGAGAAGATGCTATGAGAAAGAATGGGCTTGCGAAAAAGCCTGTGGAAAGGAGTTGGCCTGCAGGAAGCACAAATGCGAGAGTCGTTGCCATCCCGGTGCATGCCCTCCTTGCAACAAAACTTCACTGATGAAGTGTCAATGCGGTGACAAGACGGAACGCATCGCTTGTGCCGAACTGACTTGGAACTGCGAAAAGGTCTGTGGAAAACTGTTGGACTGTGGGGAGCACACGTGTGAAGTCATCTGCCACAAAGGTGAATGCGGGCCATGCCCTCTTTCTCTTCCTAGATCCTGCCCGTGTGGAAAAGAAGTGACAGTTCTCCCGTGTACGAAAGAAGTCAGCACTTGCGGGGACACGTGCTCTAAGCTCCTCCTCTGTGGGCTTCACCGCTGTTCACAAAGATGCCACAAATCATCTTGCGGGCCTTGTatggaaataatacaaaagcCTTGTCGTTGTGGATCGCATTTTAAGGAGGTTCAGTGCGAAAAGGAGTACCTTTGTGAAAAGAAatgcaaattgaaaaaagacTGCGGGGTTCATAACTGCAGTAGAAAATGTTGTGATGGTCAATGCCCACCTTGTTATGCCATTTGTAAAAAGACACTCAACTGTGGAAATCACAAATGTGAATCGGTATGTCACAGAGGGCCGTGCTACCCATGTCAGCAAACTGTACTTTTAACGTGTTCGAACTGTGCTCATCCGCTGACAACTGTCCCGTgtggtgtaaaaaaaagaaaattcaagtgCAATCAACTTTGCATTGCGCCTAAAGATTGTGACcatgaaaataaacacaattgtCATTACGGTCCTTGTCCGCCTTGTAAGCAAGTATGCAATAAATTGAAGCCCTGTGGCCACCGTTGTCCTAAGATCTGCCATTCCAAAGTCGTCGTCTGTTCGATACCGAACTTCAAACCCGCTACACCGTTGGACGTTGCCCCGTTAGAAGTGAAGTCACTGGAATGCCCAGAGTGCATTGCCATTGTCGAAGTACCGTGTCTAGGGGGACACGAGAAACTGCGGCTCCCTTGTTTCAGGGCAGTGGCTCAGTCTTGTGGCAATCCTTGCAGCAGGTTGCTTCCCTGCAAAAATCATGAATGTTCATTCCTTTGTCACTCAGTCGTCAACAGCCCAAACGAAAAGGATGCTGGGGACAATTGTGAAGTGTGCGAGGAGGAATGCGTAGCAGAGCGGGTGTGCTCGCATCCGTGCACGATTGGATGCCATCCTCCTCCGTGTCCGAATTGCAAAGTTCAGCTCAAGTTGCGGTGCCACTGCAGCCTTAATTTCGTCTACACAAAGTGCTACGAATGGTGCAGGCTACCCGAAAGCAAAAAAGACGAAAAACTCTCCTGCGGCGACCAGTGCCCGAAGCTCTATCCTTGTGGGCACAGGTGCGCCTCCAACTGTCACAAGGGCGAGTGCCCGAATGCGGACCGAtgtagaaaaaaagtcaaagtcAATTGCAAATGTAAGAGGATCAAGAAAGATGTCAtttgccatttgaaaaatgaaactgaaatcAACTGTGATGAGACATGCGAggccttaaaaaaagaaaaggaactCaaaaagctCAAAGAATTAGAAGAAGAATCCCTTGCAGAGAGGTTGAGGAACCAAAAAGAACTGGAAATGTATGAAAAGAGACTTCACGGTGGAAAAAAACAAAGGACTCGAAGAAGGGATTTTCAGGATGATTCAAAACCCAGTTTTATTTCCCAATATAAGTTCTCCATCtttgcttgtttttttcttattgtttcatcagcagtttattatttccttattaaataa
Protein Sequence
MSRPGGRGNPWNRSGGDRKKRVENGWTDGPSRSPAVPDAMSAQNKFQEAHLKMQKSVQKYMRQEYESSSEEEELESDNILASVLKNYNSFGGKSEDLGRTQNVLENSFRSGSAVCLICIALIKRTDSIWSCRSCYGFFHLNCIQRWSKDSITHQKVAEEEMPSNKSKSYCWFCPKCREEYDLSSIPTKYECFCGNRTDPVFQPWLVPHSCGEICNKPLLPECGHACLLLCHPGPCPKCPKMVRTKCHCGKSDSIPRRCYEKEWACEKACGKELACRKHKCESRCHPGACPPCNKTSLMKCQCGDKTERIACAELTWNCEKVCGKLLDCGEHTCEVICHKGECGPCPLSLPRSCPCGKEVTVLPCTKEVSTCGDTCSKLLLCGLHRCSQRCHKSSCGPCMEIIQKPCRCGSHFKEVQCEKEYLCEKKCKLKKDCGVHNCSRKCCDGQCPPCYAICKKTLNCGNHKCESVCHRGPCYPCQQTVLLTCSNCAHPLTTVPCGVKKRKFKCNQLCIAPKDCDHENKHNCHYGPCPPCKQVCNKLKPCGHRCPKICHSKVVVCSIPNFKPATPLDVAPLEVKSLECPECIAIVEVPCLGGHEKLRLPCFRAVAQSCGNPCSRLLPCKNHECSFLCHSVVNSPNEKDAGDNCEVCEEECVAERVCSHPCTIGCHPPPCPNCKVQLKLRCHCSLNFVYTKCYEWCRLPESKKDEKLSCGDQCPKLYPCGHRCASNCHKGECPNADRCRKKVKVNCKCKRIKKDVICHLKNETEINCDETCEALKKEKELKKLKELEEESLAERLRNQKELEMYEKRLHGGKKQRTRRRDFQDDSKPSFISQYKFSIFACFFLIVSSAVYYFLIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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