Clec006593.1
Basic Information
- Insect
- Cimex lectularius
- Gene Symbol
- -
- Assembly
- GCA_000648675.3
- Location
- NW:941360-953549[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 3.3e-05 0.0021 17.8 1.3 1 23 154 176 154 176 0.96 2 29 2.1e-05 0.0013 18.5 1.2 1 23 188 210 188 210 0.98 3 29 0.004 0.25 11.3 3.3 1 23 233 256 233 256 0.97 4 29 0.00092 0.057 13.3 0.4 2 23 263 285 262 285 0.96 5 29 0.95 59 3.8 0.3 1 23 358 381 358 381 0.94 6 29 0.012 0.75 9.8 0.8 1 23 412 435 412 435 0.95 7 29 0.61 38 4.4 0.9 3 23 443 464 442 464 0.91 8 29 9.1 5.6e+02 0.7 1.6 1 23 474 496 474 496 0.95 9 29 0.00077 0.048 13.5 0.4 2 23 536 558 535 558 0.96 10 29 0.29 18 5.4 0.4 1 23 576 599 576 599 0.96 11 29 0.082 5.1 7.1 0.5 2 23 606 629 605 630 0.88 12 29 0.0058 0.36 10.8 0.1 2 23 639 661 639 661 0.95 13 29 0.00083 0.052 13.4 0.4 1 23 667 690 667 690 0.95 14 29 0.00045 0.028 14.3 2.6 1 23 698 720 698 720 0.97 15 29 0.018 1.1 9.3 2.5 2 23 781 803 780 803 0.94 16 29 2.1e-05 0.0013 18.5 1.6 2 23 810 831 809 832 0.94 17 29 0.084 5.2 7.1 2.3 1 21 853 873 853 874 0.93 18 29 0.00028 0.017 14.9 0.7 1 23 893 916 893 916 0.97 19 29 0.0054 0.34 10.9 2.1 1 23 919 942 919 942 0.96 20 29 0.00022 0.014 15.2 0.2 2 23 949 972 948 972 0.95 21 29 0.092 5.7 7.0 0.2 1 23 1008 1031 1008 1031 0.94 22 29 0.00024 0.015 15.1 1.3 2 23 1040 1061 1040 1061 0.97 23 29 0.0014 0.088 12.7 0.3 1 23 1066 1088 1066 1088 0.97 24 29 0.012 0.72 9.8 0.5 1 23 1151 1174 1151 1174 0.93 25 29 0.038 2.4 8.2 0.3 2 23 1239 1261 1238 1261 0.95 26 29 3 1.8e+02 2.2 1.3 2 23 1302 1323 1301 1323 0.92 27 29 0.004 0.25 11.3 0.1 2 23 1399 1420 1399 1420 0.97 28 29 0.0038 0.23 11.4 0.2 1 22 1426 1447 1426 1449 0.90 29 29 0.054 3.3 7.7 0.2 1 20 1454 1473 1454 1475 0.93
Sequence Information
- Coding Sequence
- ATGTCGAACCGAGGTATGGAAAACTACGAGGATTTGTGTAGGTTATGTGCATCCTACGATGCGATTAAAATGGACATATTCAGTGAAAGTGGAAGGGAGAGGAAACTCGTTGATAAAATAACGACTTGTCTACCTTTCGAGGTTTCAGAAGACGACctttatccaaaatctttgtGCTTCCGGTGTATTTACAATTTGGAGAATTTCTACGACTTCAGGAGAGGGTGTATTGACGCGAAGGCGAGGCTCGAGTCAGTTATTAAAAGGTCACGAGGAGATAAGGATGACACCGGTGAAGGAGAATATTTTCAGCACAGTGATgtcaagAATTCAAACGAAGAGTGTACTGATGGAGAATACGAGACTCCAAATCCTGCTGATTTTTTGGAAGCATGCCTTGTTAGtgGAGAGTCTCCTCAAGACAACCATGGCAAACCACAAGATGAAGAAGAAGGGCCATTCAGTTGTAAAATATGCGGGAGATTATTCAATTCCAAAAGTTCTCTTACAATTCATGCAAAATTTCATCAAGATAAAAGCAAAGATTCAGATAAAGAAAGTTACTCATGTTTCGTCTGTGAAAAGGTTTTCTCGAGTAAGGGCCATTTGGCGCTTCATTCCCGCGTCCACATTGGTGAGACGAGCTCTCCATCGCTTTCTATGTCAAACAGGCCCAGCCCTGCTCAGATCAGACTTTACCGATGTGATCTCTGCAGCAAATCGTATTCCATGGCCAAGCATTTGTGGGGTCATGTGAGCACATGTCACAAGGGCGATCCTTTGGTAACTTGTGCCCTTTGTTTAAGAACGTTTTCATCCATTTCGAATCTTGAGGATCACAAAAGAGTGAAACACAAGGATGACATCAGTCTTCAACAACCCAAGGTGAGCAATGAAGATGGTGAGTTGACTGAAGCCAGTGATTCCAAAGAAGAAGGGacttcaaataaaagaaaaagttccaAGCCGAGAAAAATTGAAAGGGATTCATCGGACGCGCCTTATAATTCTGATGACAACCTCGCTACAGACGAATCTCCCGAGGATGGTAACGAACGTCCGCAATTGCTTTATTCATGTTTATTATGCGAAGAGAAGTTTATGGACACTCAAGTTTTATCCGATCATTTGTTAAACACACACGGTTATGATGGAACTTTAGATTTTAACAATGCTAGAACTGATGCTGGTGAAAATGCATATGCTGAAAGAATGATGGAAGCGGAAACAGTTTTCTGCTGTGAAATCTGTATTCGAGAATTTAACGATAGAGCAAGTCTTTGGCTACACATGCTGTACTCGCATAGAGATGAAGCCTCTAAAGCGTGCGGTATATGTTTAAAGATTTGCGACGACAATGAAAGCTTGTCACAACATGTCGAAGCATGTCATCCGAGGAACAAAACAGAACAAAGACGGTATAGTTGTCAGGTGTGCGCTCGGCAACATGACTCAAGGAAAAAATTAGTCACCCATGCTAAAATTCACAAACTGACCGACTCGCAAGGTAATCTGATCGATCCGGAAACTGTGGTCGTTTTGAATAGTGAATTTTATGCTAATGAAATACAAGGAAACTTCCCACAAGACGACGGTTTTATGTCAAGCTGTGAAGTCTGCTTTAAAGTTTTTGAAAGCGAAGCTAAATTACTCAAACATAAGAGAAGCGCACATAGAGATTCAGCCGGTCTCAATATATCGTCATCAGGCAGCTACCATTTTTACTTTGCGTGTGAACTCTGTGGCCTGTCGCATATGTCACGATCGGAAAGATGGAAACACATGGCGACAGTACACGCAGGAGAACCTTCGGTCACTTGTGAATTAAAAGAATGCGGTAAAGTTTTCCCGACGAGTGCGGTTAAGAAGGAGCACGAATCAAGTCACCATATGTTACAAGGGCAGTATCCAAATACTTGCGAAGTCTGTGGTAAAATGTGGAAAACGAGAGTGGAATATTGGAAACACATGATGGGCGTTCATCCAGATTGTTTACCTTTTATCTGTGGTGTTTGTCTTAAAGTTTTTTGTAATATCTCTTCGTTAGTTAATCACGTCCGTGGCCTGCATTGGCCGCTTGCCGGTGGCGACTTCTGTTGTGACATATGCGGAAGACCTTATTCCAAAGTGTCAAAAATGACGAGACATCGTAAGGTCCATTATGTTCTAAACACCCCTCCGGAAATTCAACTATTATTGGAAAATCCTATAACAGAAAGCGACCAACATTTTCTGGAAGATCCACCGAAACTGACGTGCGATCTTTGCCAAGGAGCCACCGAAGAATTTGAAAGCATAGAAGCACTGGGGAAACATAGGTTACAAAAGCACGAAGTAATGCCATGCGACTTATGTACAAAGTATTACGGGAGGACGTCTCATTTGTGGAAACACgttcataaaattcataaaggCCATCCAGAAATCACTTGTCCTATTTGCGAAAAAACGTCAGCTTCAAAGTCACATTTAGCCAGCCATATGGCCAAACACCATAGAAATGAAAGCTCTTTAATTGACGGCAGTATTCTTAATATGAAAACTAGTAACGGTGTCCATGCATGTGAAAAGTGCATGAAAGTGTTTAGGAAAGAATCATTAGTCAAGAAACACCTTAAACACTGCAAAGGTCCGAGGCCTCCGCCCATGCCTCTGCCTCCTCTCATAAATGGAATGTACAATTGCGAAAGGTGCTCGAAACCTTTCCCTGCCCAGAATCTTCTGTATAAACATATGCGTAGCTCTCATTTAACATACACttgtgaaatttgtttaatgaaagTGAATTCTAAATCTGATCTCTACAAACACATATGCAATAATCATGGCGATCATCCAGATGTTAAATGCAGCTATCCCGATTGCGGTAGAATTTTAAGGAGTAGGGCAGATTTGAATCGCCATCAGAGGGATCACCGCCAAAGTGTTCAATTTCACATTTGCATCTTCTGCGCAGAAATGGTTACcagcaaattaaaaatgaagaagcaTTTGACGTCTAATCATagcaaagaaacaaaatttttatgtgCAATTTGTTTAAAGCCGTTATCGAGTTTTAAAGAATTGCAATCACACGTGGAAACGAACCACAAAGTTGCTCTCGATCGTCCAAACTCTTGTCCCGTCTGTGCGAAACCTTgtacaaacaaatcaaaattaatggAGCACATAAAATCGCATAGTACATATTTTCACCCTTGTAAAATCTGCCTTAAAATATTACCGACAAAAGACGACCTCaatatacatttaaacaatCACCCGAGTGATAGCGGTGAAGAAGAGGATCAAATCGACGAAGTAGAGTTAGACGCGAATAGTATCATGGACATAATCGGAGCTCAACAAGGTGAAAAGATATGTGTTAAACGACAACTCGACGAcgaaagtgagaaagaagaaTTGATAGAAACTATCGCACCTCCGGCTAAAAAACCTAAATCCGAATTTTCTTGCGATATTTGCCAAGAGACATTTGTTTTTATGGATGATTTTATATCCCACAAAGAAAACAGCCATAAAGAAAACCAGCCTAGTATTTTAGAATCAGTTTTAATTGAGGGTAAAGTCGAGGTAAAAGAAGAGCTTCAAACCATTCCTTATGAATCCGACACTAATTTTATGCACCAGTTGGGTCTCATGCCTGAGAGCGATaaaggaggtaaaattaaaGCTAATCGGAAAGTGTATTCTAACGATTTTACGCCCAGTATGTGTGAAATCTGTGGCAAAGTGTGGCCTGCAAAAAGGCACCTTTGGCAGCACTTGATTAGATTTCATAGAGTCCAAGCAGGGACTTCATGCGGAATTTGCTTGAAACTGTGTCACAGCTATGTAGAGTTAAGTAATCACCTCGTTTTAGAACATCCGAACAATTTCGATTGCGACGGAACCAATTTGTCGTGCAGGGTTTGTGGCAAATATCACAATGCCAGATCCAAATTGCAAAATCACGCCACGATCCACGCCGGACATGAGGAACGGGCGCAAAAGAGTGCTCATCTTTGTTTGATATGTCAGATATCATTTCCCCTGTTCAAGCTTTTCTGCGATCACTGCTATAACGTTCACAATGTCACACCGGACACAAAGAACAATGCCGAACAAGGTAAAAAGCCATTGGATcttgtaaagaaagaaaatacctTTAACGGAGCCGAAACCAATTCGACCACCAAATTTCCTTTTAACAGTTGTGACGTCTGTTCATTAGTTTTTGCGAGTGAACAAGGGTTAATAAATCACAAGAGAATACATAGCCAATCTGACAGTTACAAATGTGGTCAGTGCGGTGAACTGTTTACATCAGCGAATCTTTTGGCGTCTCACAAAGCTGACAAACACAAAGGGGCAGAATTCGTCTGTGCAGACTGCAAGTCGAACTTTTCCACCTACATCCAATTAACCGAACATAATAAAGTCTGTAAAGCTAAACTAAGGGCCCAAGTTAAAAGTGGTGAAGATATGGAGACAATTATGGCTGAAGAAGATGAAGGAGATGAAGTTGATGAAGAagtggaagaagaagaagaggaggaggaagaagaagaagaggaggaggaggaggaggaggaagaagaagaagacgaTGACGAGGACAGTGGTGATGAAGTTGAAAATACCGATATCAATGATACAAATGACGTATCATCTGCTTCCGAAGTAGACAAATCTGAAGTCGCCGATGATATTGAcagttcttcttcttcttctgacgaagaagaagaagaggaggaagaggaagattatgaagaagaagaagaagaagaggaggagGAAGTAGAAGAAGAAGTAAAATCCGACGATTTTACCAATGTTACCCAGGAAGAGCCTGTGAGGGCTATAGAGGCCTATGTCTGTGACAACATGTTTGAGGTAGTAAAGGTAGATATCTCTGATGAATGTTGCATTTCAAAGGCGAATGAAAATTAG
- Protein Sequence
- MSNRGMENYEDLCRLCASYDAIKMDIFSESGRERKLVDKITTCLPFEVSEDDLYPKSLCFRCIYNLENFYDFRRGCIDAKARLESVIKRSRGDKDDTGEGEYFQHSDVKNSNEECTDGEYETPNPADFLEACLVSGESPQDNHGKPQDEEEGPFSCKICGRLFNSKSSLTIHAKFHQDKSKDSDKESYSCFVCEKVFSSKGHLALHSRVHIGETSSPSLSMSNRPSPAQIRLYRCDLCSKSYSMAKHLWGHVSTCHKGDPLVTCALCLRTFSSISNLEDHKRVKHKDDISLQQPKVSNEDGELTEASDSKEEGTSNKRKSSKPRKIERDSSDAPYNSDDNLATDESPEDGNERPQLLYSCLLCEEKFMDTQVLSDHLLNTHGYDGTLDFNNARTDAGENAYAERMMEAETVFCCEICIREFNDRASLWLHMLYSHRDEASKACGICLKICDDNESLSQHVEACHPRNKTEQRRYSCQVCARQHDSRKKLVTHAKIHKLTDSQGNLIDPETVVVLNSEFYANEIQGNFPQDDGFMSSCEVCFKVFESEAKLLKHKRSAHRDSAGLNISSSGSYHFYFACELCGLSHMSRSERWKHMATVHAGEPSVTCELKECGKVFPTSAVKKEHESSHHMLQGQYPNTCEVCGKMWKTRVEYWKHMMGVHPDCLPFICGVCLKVFCNISSLVNHVRGLHWPLAGGDFCCDICGRPYSKVSKMTRHRKVHYVLNTPPEIQLLLENPITESDQHFLEDPPKLTCDLCQGATEEFESIEALGKHRLQKHEVMPCDLCTKYYGRTSHLWKHVHKIHKGHPEITCPICEKTSASKSHLASHMAKHHRNESSLIDGSILNMKTSNGVHACEKCMKVFRKESLVKKHLKHCKGPRPPPMPLPPLINGMYNCERCSKPFPAQNLLYKHMRSSHLTYTCEICLMKVNSKSDLYKHICNNHGDHPDVKCSYPDCGRILRSRADLNRHQRDHRQSVQFHICIFCAEMVTSKLKMKKHLTSNHSKETKFLCAICLKPLSSFKELQSHVETNHKVALDRPNSCPVCAKPCTNKSKLMEHIKSHSTYFHPCKICLKILPTKDDLNIHLNNHPSDSGEEEDQIDEVELDANSIMDIIGAQQGEKICVKRQLDDESEKEELIETIAPPAKKPKSEFSCDICQETFVFMDDFISHKENSHKENQPSILESVLIEGKVEVKEELQTIPYESDTNFMHQLGLMPESDKGGKIKANRKVYSNDFTPSMCEICGKVWPAKRHLWQHLIRFHRVQAGTSCGICLKLCHSYVELSNHLVLEHPNNFDCDGTNLSCRVCGKYHNARSKLQNHATIHAGHEERAQKSAHLCLICQISFPLFKLFCDHCYNVHNVTPDTKNNAEQGKKPLDLVKKENTFNGAETNSTTKFPFNSCDVCSLVFASEQGLINHKRIHSQSDSYKCGQCGELFTSANLLASHKADKHKGAEFVCADCKSNFSTYIQLTEHNKVCKAKLRAQVKSGEDMETIMAEEDEGDEVDEEVEEEEEEEEEEEEEEEEEEEEEEDDDEDSGDEVENTDINDTNDVSSASEVDKSEVADDIDSSSSSSDEEEEEEEEEDYEEEEEEEEEEVEEEVKSDDFTNVTQEEPVRAIEAYVCDNMFEVVKVDISDECCISKANEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -