Clec003899.1


Basic Information
Transcription Factor Domain
Sequence Information
Similar Transcription Factors

Basic Information

Insect
Cimex lectularius
Gene Symbol
-
Assembly
GCA_000648675.3
Location
NW:126249-136474[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 0.0015 0.093 12.6 1.5 1 23 179 201 179 201 0.98
2 34 0.0011 0.067 13.1 0.9 3 23 268 288 267 288 0.96
3 34 0.0011 0.069 13.0 0.2 2 23 295 317 294 317 0.95
4 34 0.00067 0.042 13.7 3.1 1 23 323 346 323 346 0.95
5 34 0.037 2.3 8.3 1.3 1 23 350 373 350 373 0.94
6 34 0.18 11 6.1 0.1 1 23 380 403 380 403 0.87
7 34 5e-05 0.0031 17.3 1.9 2 23 423 444 422 444 0.96
8 34 0.0054 0.34 10.9 1.8 1 23 450 472 450 472 0.93
9 34 0.24 15 5.7 2.4 1 23 491 513 491 513 0.95
10 34 0.033 2 8.4 3.1 1 23 519 541 519 541 0.97
11 34 0.00022 0.014 15.2 2.0 1 23 555 577 555 577 0.99
12 34 1.1e-05 0.00066 19.4 1.7 1 23 583 605 583 605 0.96
13 34 0.038 2.4 8.2 0.6 1 23 611 633 611 633 0.96
14 34 0.025 1.6 8.8 0.4 1 23 639 661 639 661 0.98
15 34 4.7e-06 0.00029 20.5 1.0 1 23 667 689 667 689 0.99
16 34 8.2e-06 0.00051 19.7 1.3 2 23 696 718 696 718 0.96
17 34 0.004 0.25 11.3 0.4 1 23 1175 1197 1175 1197 0.97
18 34 0.96 59 3.8 0.3 1 23 1203 1226 1203 1226 0.95
19 34 0.31 19 5.3 1.2 2 19 1237 1254 1236 1256 0.92
20 34 0.005 0.31 11.0 5.4 2 23 1266 1287 1265 1287 0.96
21 34 0.0073 0.45 10.5 0.7 2 23 1294 1316 1294 1316 0.89
22 34 4.6e-06 0.00028 20.5 3.4 1 23 1322 1344 1322 1344 0.96
23 34 6.9e-06 0.00043 20.0 1.4 2 23 1354 1375 1353 1376 0.94
24 34 0.24 15 5.7 0.1 1 23 1386 1409 1386 1409 0.86
25 34 0.00056 0.035 14.0 1.1 1 23 1430 1452 1430 1452 0.96
26 34 0.12 7.7 6.6 3.3 1 23 1458 1480 1458 1480 0.91
27 34 0.036 2.2 8.3 2.8 1 23 1499 1521 1499 1521 0.94
28 34 0.3 19 5.4 0.2 1 23 1527 1549 1527 1549 0.97
29 34 0.00011 0.0071 16.1 0.6 1 23 1564 1586 1564 1586 0.98
30 34 1.7e-06 0.00011 21.9 0.5 1 23 1592 1614 1592 1614 0.98
31 34 0.0013 0.081 12.8 0.1 1 23 1620 1642 1620 1642 0.97
32 34 0.001 0.063 13.2 3.4 1 23 1648 1670 1648 1670 0.98
33 34 6.3e-06 0.00039 20.1 1.5 1 23 1676 1698 1676 1698 0.99
34 34 2.7e-05 0.0017 18.1 0.6 3 23 1706 1727 1705 1727 0.97

Sequence Information

Coding Sequence
atggatgTTGCAATGAACGTTCGGAACGAGGAAGAGTCGGACGAGTGCCTGGAACTTGATCTCGGCTCACCTTTCAGCTTCAGCCTGGACGGCATGTCTCTGCTCGGCCAGGGTGTCGAGTCGAACATGTTAGACCTGTTCAGCCAGGACGTGAACTGTGCGGTGCCCGGATGTCTGACCGACGAGTCGTCCGGTAAGATTTTCTTCGACTTTCCGCAAGAAGAGTCGACGTACCAGCGATGGCTCATTTACTGCCAGCGTCTGAGCGCTTACGAGGGCAAGCATAAAGTAGTTATTAATAGAGAGTCGAAAATCTGCTCGGACCATTTCAGGGCCGATCAGTTTGTCAAGAATTCCAAGTGGCTCAAAAAATCAGCGGCGCCTTGCGTTAACCCAGAACTGCCGGCTGGAGCGTATTCCCCATCATTGAAAAAAAGCGATTTAACTAAAGATTCGAATGATGAAGATTCTCAAGAAGACAGCACAGTGAAAAGTCCTAaagaaaacattacaaaaaacaaaactaaaaacattttctattgtaaattatGCAATCTTTCTTATTCAAACCAAGCTGAATACTTAGAACACAGATACACGCATACAGATTTCAACTGTATATGTTCAGCTTGTAAAAGTTCGTATGAATGTTCACAGGACTTTAATAAGCACTGGTCGGAGTCGCACGAAGGCACGCCGGACAAAGAGATCCAatgtaaaaagtgtaaatttatatttaattctataatAATATACGATTCTCATATCTGTGATAATATCGCCTTCAACCAAAAAAACATCTGTGATATTTGCAAGAAATCTTTCATATCTAAGGTCCAGCTTGAGTTCCACATGAAGTTTCATGAAGAGGGCAAGCGTCTGTACTGTGAACTGTGTGGTTTGGTGTTCGAGGATGAATCGGCATTCTACAGGCACAACAGGATGAAGCACAAATCACAAAAGTCTTTCTCCTGCGAACCCTGTGACAAGATGTTCAGCTCGAGGAAAACCCTGAAGCGCCATTTTAACAGGAAACATAAAGAAGACTTTCCTTGCGATTGCTGCGACGGCgttttcaaatcaaaacaaGAGCTTGAAAACCATACGAGCCGTCTGCACAAAATCGAAGAAGAAGCGTACAGCTGTACGATATGCAGGGAGGCGTTTCCAAGCGCGTCCTTCGGCATAATTCATGCGAAAACTAGGCACAATGTTACAACAGAAAACCCTTACCTCGTTGCCCCAGTGAGTATCAAAAGGGTCTTGATCTGCGAATACTGCGAAAAATGTTTTGCCGAGAAATCCTTATTGAACAGGCACAAGCTTTCGCACGATTACGAAAACCCTTATGAGTGTAAGTTCTGCACTCTGACCTTCAGCACACGAGCTGAGTACAATCTGCACAGGGGTTTTCATATTGACTCGGACATACCTTTCGAGTATAGCATCAATTTTAAACTGTGTCTGACCTATTTGTGCGAATACTGCGAAAGGTTTTTCTACTGCTTTTCCACGTTGTCAGAACACATGGCGATCCACTACCAACTGGAACCGTACATTTGTAGAAACTGTGATATGAAGTTTAAATCTTTGGAAGAAGCGTGCAAACACAGGTCGAGTCATTTCCAGTACGAAACGAACAACAGGAAGATCAGTAAGCCTTACGAGTGTCATTATTGCACAAAATCTTTCGTCCTCAGGAGTAttttaattgaccatattagGAAACACACGGGCGAGAAGCCTTTTATCTGCGACCAGTGCGGGAAAGGGTTTTCGCAGAGTTCTTCACTCTACACACACAGGAAATTCCACTCGAATGAGCGCCCTTATTCATGTGATTTTTGCTCGAAGACTTTCATATTGAAAGGTGACAGGGATTCCCATGTCAGGGCGCATTCGGGCGAACGGCCTTACATCTGCGAGTTCTGCGCCAAGGGCTTTATGACCCAGGGTGTGTACAGCCAGCACAGGCGGATCCACACCGGCGAGAGGCCTTACAAGTGCGAGACATGCGACATGGCGTTTAAACGCTCCTACGCGCTTACCCTCCACAAACGGATCCACACCGGAGAAAAGCCCAACACGTGCAACTTCTGCGGAAAGAGCTTCAGGCTACGCGGCGATCTCACTCGACACTTGAAGGTTCAACATCAACAATTAAGAAACTCTGGGACAGCCGAAAGAACTAGTTTCAAATATCGATTTTCCGGGTTCGGGGTCCGTTGGAAAAGTGTTTTTCCACCTGGAACGGGATGGATCAGTGGGCCGAGGTCCGTGTACTCGTCTACCCCCACCATACATCCTGGAAGTGATCAATGCACCACGCACTTTCTCTACGCGatcaagttatatttttttccacggCGAGATCTAGTCTTTTCCCCGTCAATTTTTCCccgtttatttaatttgaaatctcCCCAGATGAAACTCGTCGTGAAAAATAATCTGGGCGAGACGGTCTCACTCCAGATCCGGCCAGAGGACACTTTTGTCGATTTAAAGGAGAGGGTCGAAGATGAAGCAGGCATCTCTTTGGATTTGAACGACATCCCGACCAACGGAAAAAGGATAATAGACACGCAAAAAGTCATCGAGTATTTCATCAACCAAGACCCGGAGGAGACTCTCCAGGAAGAGGCGGATGTCCAGTGCGCCGTTCCAGGATGCAACAACAGCAAAATAACGACACCGGACAAGGTATTTTTCGATTTTCCCCAGTTGCCCCAGGAAGAGACGAGATGCCATCAATGGGTCTTGTACTGCCAGAGGTTGAGCATGGCTTCGGGTAAACACAGGATGAACTTGACTCAGGAGTCGGCAATCTGCTCTGACCATTTCAGGAGTGATCAGTTTGTCAAAAACACGACCACCCTGTTGAAGAGGACGGCAGTCCCTTGCATCAACCCGGAGCTCGTAAGGATAGGCGACTTCGTCTCGCCTGCACAGTTTCCCAAGCTTGCACCACCTGAGACGACCCAGCCTCACGTGGTGACGATGCTCCATTGCCGACTATGCGCCCAAAAATGCCCTGATTTTGTCTACCTCTATGGAACAGAAGGTAAGAAGATCCGCCTCGCCGAAAAGATCAACGCCTGCCTGCCGATCAAAGTCCAGATGACGGACGGTCTGCCCAAGCAGGTCTGCAAGTCCTGCGTACAAGAAGTAGAGAGCTTATTTAACTACGGCCAGGTGTGTTGTAACGCAGATGACGAGTTGAAATCCATGTCAGAAAAGGGCAGTCTCATTGACGACAAGCATCCTTGTGACGCAGAGTCATGCCCGCTATGTGTCGAAGGCgaacttataaaaacaaacctAAGCAAAGACAATCCCGAAAAGGGTGAAAAAGAGTGTGGGCTCAATGTGGAGATGGTGGCGATCAAAGAGGAACAACAGGACTATTTTGAAAGCGAATTACAGCCGATTGAAGAGGACGATGAGGACGAAAAGCCTAAACAGTTAGACGAGATGGAAGGGATGGAAGAAGACTCAATGCCTTTTGAAGAGAACGGAGCGTTCATATGCAGGATCTGCGACCAGGAGTATGTCGAGCTGTCCGAATTTACAAAACACAGAGAGAGCCACGCGGTCGACTCTCTCTTCCACTGTCCCAGCTGCGAGAACTACTACGATTCCATCGACGATTTGGAAGAACATGTCTTGTCTTCGCATAAAACATCTCAGAACGAGAATGTGCGCCTCCAGTGTAAAACGTGCAAAGCGACTTTTAAATCTTTCATACTACTCGCTTCTCACGGTTGTGAATCGATGCTTACGGTTCATTCCAATAAATGCAATATTTGTCATAAAACGTTCAGGTCGAAGGCACGACTTCAGTTCCACATGAAGTTTCATTCAGGCGCGAGGCCAGGCTATTGCACACTTTGTAAAAAGACTTTCCCTGATGAGGTGAAACTCTACAAGCACACAGTTTATCTACATTCTTCGAGGATCGGACATCATTGTGACGAATGTGGAAAGATTTTCAGGTCTCAGAGCGCTTTGAAGTATCATCAGAGGGCGCACATAGTCGATATGTTTTCTAAATCCATCTCGTGCGAGTGGTGCAATAAAAGCTTCGTGTCAAAGAGTCTCCTCCAATCGCACATAACATCTCATCATAAAAATTCGAGTAAAGAAGCTTCCTGTTTCACCTGCAAGATCTGCTACGAAGCCTTTCCCAGCACGTACGTAGCCGTCGCGCATATGGACGCAAAGCACAAAGAAGAGTGCATGGATGAGCCTTCGTACAGCTTCGAGATGCACACGTTGAACCGTATCTACACGTGCGAATATTGCGAGAAGTGTTTTGCCGAAGGTGCAACGCTCAATAAGCACAGGGAAGCCCACACTTCTGACATGCCATACGAGTGCAAATACTGCTCGGAGTCTTTCAGTTCTTTTGGAGAACATACAGATCACAAGTCGTCGCATGTAGACAGAGACATACCGTTAGAATACAGCACGAATTTTGTCATCCCTTTGACCTTCCTTTGCGAATACTGCGACAGGTGTTTTATGAATTATATAAAGTTTTCCGAACACCTGACCATCCATTACCACCCGGAGCCGTATCAGTGCAGGATCTGCATAGCGAGGTTTAAGACCTTAGAAGAAGTGATGGAGCACAGGGCGTCCCACCCTGAATATGCGACAATAGacgataataattattacaggcCTTTTGAATGCCATTACTGTATAAAATCGTTTGCCCTTGAAGACGCCCTGATAAAGCACATAAGGATGCACACGGGGGAAAAGCCGTTTATATGCGATCAGTGTGGGAAAGGGTTCTCGCAGAGTTCGGGGCTGTACACGCATCAGAAGGTCCATTCGAACGTCAGGCCGTACGACTGCCCGATCTGCCCGAGGTCTTTCAAGATCAAAGGCGACAGGGACGTTCACGTGAGGAAGCACTCGGGCGACCGGCCGTACAAATGCGAGTTCTGCGGCAAGGCGTTCATGACGCAGCACGTCTACAGCCAGCACCGCAAGATACACACAGGCGAGAGGCCGTACAAGTGCGACGTATGCGGGATCTCTTTCAGGCGGTCGCATGTCCTCACGGTCCACAAGCGCATCCACACCGGAGAGAAGCCCAACATTTGTGATATTTGCGGCAAGCGCTATCGACAGAAAGGCGACATGCTTAAGCACAGGCGCATACAACATTCATTCCGCTGA
Protein Sequence
MDVAMNVRNEEESDECLELDLGSPFSFSLDGMSLLGQGVESNMLDLFSQDVNCAVPGCLTDESSGKIFFDFPQEESTYQRWLIYCQRLSAYEGKHKVVINRESKICSDHFRADQFVKNSKWLKKSAAPCVNPELPAGAYSPSLKKSDLTKDSNDEDSQEDSTVKSPKENITKNKTKNIFYCKLCNLSYSNQAEYLEHRYTHTDFNCICSACKSSYECSQDFNKHWSESHEGTPDKEIQCKKCKFIFNSIIIYDSHICDNIAFNQKNICDICKKSFISKVQLEFHMKFHEEGKRLYCELCGLVFEDESAFYRHNRMKHKSQKSFSCEPCDKMFSSRKTLKRHFNRKHKEDFPCDCCDGVFKSKQELENHTSRLHKIEEEAYSCTICREAFPSASFGIIHAKTRHNVTTENPYLVAPVSIKRVLICEYCEKCFAEKSLLNRHKLSHDYENPYECKFCTLTFSTRAEYNLHRGFHIDSDIPFEYSINFKLCLTYLCEYCERFFYCFSTLSEHMAIHYQLEPYICRNCDMKFKSLEEACKHRSSHFQYETNNRKISKPYECHYCTKSFVLRSILIDHIRKHTGEKPFICDQCGKGFSQSSSLYTHRKFHSNERPYSCDFCSKTFILKGDRDSHVRAHSGERPYICEFCAKGFMTQGVYSQHRRIHTGERPYKCETCDMAFKRSYALTLHKRIHTGEKPNTCNFCGKSFRLRGDLTRHLKVQHQQLRNSGTAERTSFKYRFSGFGVRWKSVFPPGTGWISGPRSVYSSTPTIHPGSDQCTTHFLYAIKLYFFPRRDLVFSPSIFPRLFNLKSPQMKLVVKNNLGETVSLQIRPEDTFVDLKERVEDEAGISLDLNDIPTNGKRIIDTQKVIEYFINQDPEETLQEEADVQCAVPGCNNSKITTPDKVFFDFPQLPQEETRCHQWVLYCQRLSMASGKHRMNLTQESAICSDHFRSDQFVKNTTTLLKRTAVPCINPELVRIGDFVSPAQFPKLAPPETTQPHVVTMLHCRLCAQKCPDFVYLYGTEGKKIRLAEKINACLPIKVQMTDGLPKQVCKSCVQEVESLFNYGQVCCNADDELKSMSEKGSLIDDKHPCDAESCPLCVEGELIKTNLSKDNPEKGEKECGLNVEMVAIKEEQQDYFESELQPIEEDDEDEKPKQLDEMEGMEEDSMPFEENGAFICRICDQEYVELSEFTKHRESHAVDSLFHCPSCENYYDSIDDLEEHVLSSHKTSQNENVRLQCKTCKATFKSFILLASHGCESMLTVHSNKCNICHKTFRSKARLQFHMKFHSGARPGYCTLCKKTFPDEVKLYKHTVYLHSSRIGHHCDECGKIFRSQSALKYHQRAHIVDMFSKSISCEWCNKSFVSKSLLQSHITSHHKNSSKEASCFTCKICYEAFPSTYVAVAHMDAKHKEECMDEPSYSFEMHTLNRIYTCEYCEKCFAEGATLNKHREAHTSDMPYECKYCSESFSSFGEHTDHKSSHVDRDIPLEYSTNFVIPLTFLCEYCDRCFMNYIKFSEHLTIHYHPEPYQCRICIARFKTLEEVMEHRASHPEYATIDDNNYYRPFECHYCIKSFALEDALIKHIRMHTGEKPFICDQCGKGFSQSSGLYTHQKVHSNVRPYDCPICPRSFKIKGDRDVHVRKHSGDRPYKCEFCGKAFMTQHVYSQHRKIHTGERPYKCDVCGISFRRSHVLTVHKRIHTGEKPNICDICGKRYRQKGDMLKHRRIQHSFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00339928;
90% Identity
iTF_00339928;
80% Identity
iTF_00339928;