Basic Information

Gene Symbol
dnajc2_1
Assembly
GCA_000648675.3
Location
NW:821600-823829[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00027 0.21 11.1 0.0 3 35 432 468 431 470 0.85
2 2 7.6e-14 5.8e-11 41.7 0.1 3 44 536 581 535 583 0.90

Sequence Information

Coding Sequence
ATGGTCGAAGCGAGGGGACTTTGCGACGGTGCGACTTACAGATACTGGAACGTGGAATGCGTCGGCCCGTATTACGTCCAGTACTTGGCCTTATTGCACGACGACAGCGACGGCCTCTCGGACGATTCGTCCAACGCGAGTGAGCAGTCGGAAGAGGCGTTCGTCGTCGACCCAGACGACGACGCCTACCTGCGGAGCCTCGACCCCAAAGAGTGGAAAAAGCAGGACCACTACGAAGTCCTCGGTTTGAAGTCCCTCCGGTTCAAAGCTTCCCCGAACGTCATCAAGTCGGCCTACAGGCAGAAAGTCCTCAAGCACCACCCGGACAAAAGAAAGGCCAAAGGTGAGGTGGTCAAAAGGGACGAGGACTATTTCACGTGTATAACGAAAGCCTGGGAAATCCTTGGCGACAAGACGAAAAGGAGGGCGTACGATTCTGTCGATCCTTATTTTGACGACGCCCTCCCTTCTAATTCCGAAATAgccaaaaaagatttttacaaattattcaaaGCTTATTTCGACAGGAATTCCCGCTGGTCGGAAAAGACTCCCGTGCCGGAGCTAGGCGATGCGGACGCTTCGAGGGAGGCGGTGAATAGGTTTTACTCGTTTTGGTACGATTTCGACTCATGGCGAGAATACTCTTACGAAGACGAAGAAGCCAAGGAGAGCGGGCAGGACAGAGAGGAAAGGAGGTGGATCGAAAAACAGAACAAAGCGGTAaggagtaaaaagaaaaaagaggaacttGCGAGGATCCGGAACCTCGTCGACTTGGCCTACAATGCTGATCCTAGGATTGTCAAGTTCAAAAATGAAGACAAGTTGAAGAAAGAAGCTGCCAAAAAGGCCAAACAGGATGCCGCGAGGGCCAGGGTCGAAGAGGCCGAACGCGCCCAGCGCGAAGCCGAAGAAGCCAAGctcaaagaaaaagaagaagccGCCGAGAAAGAAGCGCTGAGGCTGAAGGCGATCAAGGCGGAAAAAGAAGCTCAAAAACGTGCCTTGAAGAAAGCCAGAAAGACGCTGAGAGATCTCTGTAAGGAAAACGGTTACTACGTCACCAATGAAAATGATCTCGTCAAATACATGGAATTTTCCGAAAAGCTTTGCGAAATGATGAGCGCACTCGAACTCGACGACTTCAGCAACAAGCTCAAAGAAGGTGGCAATGAAGTTTATCGGGCGAAATTTGAAGAAGTCGAACAGAGAGTCATTAAGGAGCATCAGCAAATGATGTCCGGAATAGGAAATAAACAGatgaaTGGTCAGGTGAACAATAAATCTCACAATTGGAGTCAAGCGGATATAACGCTTCTTATAAAAGCGGTCAACCTTTTCCCAGCCGGGACGTCTCAGAGATGGGACGTCGTCGCCAATTTTATAAACCaacattctaaaaataaacagaaagacGTCTCGGCGAGGGAGGTTTTGTCCAAGGCGAAGGAGCTCCAGACGAACGATGATTCAAAATCGATGTTGAAACAAGCCGCGAACAACAAGGCCTAcgacaattttgaaaaacaaaagaagatgCCGACGTCTGTCGAGGCCGAGACTTCGCAGCGATTCGACCTCCAGCCCGAAACGAACGCGGCGCCTTGGACTGCGGAAGAACAAAGCCTGCTCGAACAGGCGTTGAAAACGTACCCATCATCGACGGAAGAGAGGTGGGATAAAATTGCAGATTGCATACCGACAAGGAGTAAAAAAGATTGTATGAAGAGGTACAAAGATCTAGTACAAATGATCAAAGCTAAAAAAGAAGctgttaaatctgttaaaaaataa
Protein Sequence
MVEARGLCDGATYRYWNVECVGPYYVQYLALLHDDSDGLSDDSSNASEQSEEAFVVDPDDDAYLRSLDPKEWKKQDHYEVLGLKSLRFKASPNVIKSAYRQKVLKHHPDKRKAKGEVVKRDEDYFTCITKAWEILGDKTKRRAYDSVDPYFDDALPSNSEIAKKDFYKLFKAYFDRNSRWSEKTPVPELGDADASREAVNRFYSFWYDFDSWREYSYEDEEAKESGQDREERRWIEKQNKAVRSKKKKEELARIRNLVDLAYNADPRIVKFKNEDKLKKEAAKKAKQDAARARVEEAERAQREAEEAKLKEKEEAAEKEALRLKAIKAEKEAQKRALKKARKTLRDLCKENGYYVTNENDLVKYMEFSEKLCEMMSALELDDFSNKLKEGGNEVYRAKFEEVEQRVIKEHQQMMSGIGNKQMNGQVNNKSHNWSQADITLLIKAVNLFPAGTSQRWDVVANFINQHSKNKQKDVSAREVLSKAKELQTNDDSKSMLKQAANNKAYDNFEKQKKMPTSVEAETSQRFDLQPETNAAPWTAEEQSLLEQALKTYPSSTEERWDKIADCIPTRSKKDCMKRYKDLVQMIKAKKEAVKSVKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-