Clec008329.1
Basic Information
- Insect
- Cimex lectularius
- Gene Symbol
- bab1
- Assembly
- GCA_000648675.3
- Location
- NW:908385-1420848[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-16 2.8e-13 48.7 0.0 1 43 310 353 310 355 0.95 2 2 0.52 8.5e+02 -0.8 0.1 5 15 515 525 514 528 0.91
Sequence Information
- Coding Sequence
- ATGCATCCGGGTATTGGAGGGGGGCCGCCGGCTTCGCCCCAACAGTTCTGCCTCCGGTGGAACAACTACCAAAGCAACCTGACCAATGTTTTCGACCAACTGCTCCAGAGCGAGAGTTTCGTGGACGTCACCCTCGCTTGCGAAGGGCACTCAGTGAAGGCCCATAAAATGGTGCTGTCAGCGTGCAGCCCTTATTTCCAGAGCCTCTTCTTCGACAACCCCTGTCAACACCCCATCGTCATCCTCAAGGACATCAAGTGGCCAGAGTTGAAGGCGGTCGTCGAATTCATGTACAAAGGTGAGATCAACGTGTCCCAGGAGCAGATCGGCCCCCTGCTCAAAGTGGCCGAATCTCTGAAGATCCGGGGTCTGGCGGACGTCAACGGAGAACAGGACCTCGGCAAGGGCTTGGAAGACGTGTCACTCTCGAGGAAGAAACGCCGGCGGACGTCCGTCGACCCTAGTAGCCCAGAAGGAAGCGTCTCAGAATCCCTGGAAGGTAGGGCTCTAGAACTGGTGACAACGTCTCCGCCTTCCTCGTGTCCGCCTCCTGCCGGACCGCCCTCGAGCACGCCGACCAACATGCTGCCGCTCCCGCTTGCACCGCCGCCGCCTCCACCGCCCGTTCAGCCTCCGCAACAGCCATCCGAAGACATGGAAATCAAGCCGGGCATCGCCGAAATGATTCGCGAGGAAGAAAGGGTGGCGGAAGATTTGAAAAGGCAGTGGAGCTCATGGGGTGCCAGTATGCAAGATAAGgcCAAAATGCTCGAGTCTTCGCACGCCTGGCTAGGAGCTTCGACGTCTTCTTTGGCCGCAGACAGTTACCAGTACCAACTGCAATCGATGTGGCAGAAGTGCTGGAACACGAACCAGAGCCTGGTCCACAACCTGAGGTTCCGCGAGCGAGGGCCACTCAAGTCCTGGAGGCCGGAGACGATGGCTGAGGCGATCCTGTCCGTTCTGAAGGAAGGGCTGAGCCTATCACAGGCAGCGAGGAAATACGACATCCCTTATCCCACCTTCGTCCTCTACGCCAACCGGGTTCACAACATGCTAGGACCGTCTGCTGACGGCGGATCAGATTTGCGGCCGAAAGGACGTGGCCGGCCTCAGAGAATTTTGCTCGGCATTTGGCCCGAAGAACACATACGCGGTGTCATCAGGGCTGTCGTTTTCCGGGATCCGCAACACATGAAAGACGATACAATGAACCTCGGCTATCATAGACTGCAGCAGAAAACACAACTCTGCGGACAGGAAGTTGCGCATAACTACAGCAACAGCGGCGGCGGTAGTGGTGGAGGCAGCGGCCCCGGAAGCGTTGCCGGTTCGGATTCGGTCAGCGCCGGCGGTGTTTCGCCGAATTCCGCAGCTGCGGCAGTCGTCGCAGTCGCCCAGAATCTGAGGCAGCAGATGCTCGCAGCAGCAGCCCAGCAGCATCATCACCACCACCACCAGAACCACGCCCAGCACCACCCGACGGCCCAGGAGCACCAGCAGCCGTCCCACCTTCACAATAGGTCGCCCAACTTCGGCTTCTTCGCTGCAGCAGCTGCACACTGCGCTAACGGCAACAACCTCGTCCTCCACTCTCCGAGCCCAGTCGACAGCTCGCCCAGGTCGTCTCCTCTCACCCAGCCCAACAATAATATGGAGATGGCTCTTAACATGGGATTTAAACCGATGGTCAACGATTTGTCGTCGGCACCCAGAAACGAGCATATGTTCCAAGAAGAGATCGAAGATTTGGTCAAAAGGCCGCAATCGAGCGAGACCCCTAAGATGAAACCCCCGCTGATGCCATATAAATTACAGAATACTTCCATGCCCAACGACCTGTCTACAAGGGCGGACCACATGTTCCAGGAGGAGATGGAGAACATGATGAAACACCCACCTGTATCCGAAGCTGCCAAAGTTAAAGTTGGCATCGGTGTCAGCAATGTGAGCTTGCCTTTCAAAGGCCAGTGCGAATCATACGGACCGCCAAGGACAGAATCTCTGTTCCAAGATGACATTGAAGATCTTGTGAAAAGCCCGCCATCCAACGCCAAGAAAGAGCCTATCCAGATGTCCATCGACATGACGACAAACGTCTCTGAATAA
- Protein Sequence
- MHPGIGGGPPASPQQFCLRWNNYQSNLTNVFDQLLQSESFVDVTLACEGHSVKAHKMVLSACSPYFQSLFFDNPCQHPIVILKDIKWPELKAVVEFMYKGEINVSQEQIGPLLKVAESLKIRGLADVNGEQDLGKGLEDVSLSRKKRRRTSVDPSSPEGSVSESLEGRALELVTTSPPSSCPPPAGPPSSTPTNMLPLPLAPPPPPPPVQPPQQPSEDMEIKPGIAEMIREEERVAEDLKRQWSSWGASMQDKAKMLESSHAWLGASTSSLAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAILSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGSDLRPKGRGRPQRILLGIWPEEHIRGVIRAVVFRDPQHMKDDTMNLGYHRLQQKTQLCGQEVAHNYSNSGGGSGGGSGPGSVAGSDSVSAGGVSPNSAAAAVVAVAQNLRQQMLAAAAQQHHHHHHQNHAQHHPTAQEHQQPSHLHNRSPNFGFFAAAAAHCANGNNLVLHSPSPVDSSPRSSPLTQPNNNMEMALNMGFKPMVNDLSSAPRNEHMFQEEIEDLVKRPQSSETPKMKPPLMPYKLQNTSMPNDLSTRADHMFQEEMENMMKHPPVSEAAKVKVGIGVSNVSLPFKGQCESYGPPRTESLFQDDIEDLVKSPPSNAKKEPIQMSIDMTTNVSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00339972;
- 90% Identity
- iTF_00339972;
- 80% Identity
- iTF_00339972;