Clec001900.1
Basic Information
- Insect
- Cimex lectularius
- Gene Symbol
- bab2
- Assembly
- GCA_000648675.3
- Location
- NW:177793-184954[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.6e-17 9.2e-14 50.3 0.0 4 45 284 326 281 326 0.94
Sequence Information
- Coding Sequence
- ATGGCATCGATGGCAGTGCAGCAATTTTGTTTACGTTGGAACAATCATCAACCGAATTTTATATCGGTGTTCACGAATCTGCTGACTAGCGAGTCTCTCGTCGATGTCACGTTAGCTGCTGAGGGGAAGCAGCTGCAGGCTCACAAAGTCGTTTTATCTGCTTGCAGCACCTACTTCCAGTCACTTTTTACTACAAATCCATGTCAGCATCCAATCGTGATATTAAAGGACATAAAATATTGTGATTTAAAAACCATGGTTGATTTTATGTATTATGGAGAAGTCAATGTTTCACAAGAGCAGTTGCCTGCAATATTGAAGacggctgaaactttaaaaattaagggATTGGCTGAAATGCCAGATCAGTTGTCACTGAGTAAGTCTGCGAGCCAGTCGTCAGACAAATGCGAATCGCCATCGCCGATATCTCCTTCGGTTTTGAGAAGGAAAAGACTCAGGAAGTCGTCGACAGGCTCTGGTTCCGAACAGACGAGTGAAGAGACTGCAGCAAGTGGTAGTGGCAGCGGAACAGATATTGTTGCATCCCCTATTAAACTCGAACCAGAGGAAACGGTTCTTCGGAAAGAACCGAGTACGGAATCAGAACAAAGAGACAGTTCGCACAGCTTCGAAGAAGAATCATACACTCCTagAAATTTGTCCGAGGAAGGTGAGTCAAATATTAGATGGAGTTCTTCAGAAGAAGCAACAAAACCTGGAACATCGACCGTGCAGCCACAAGGATGGATGAACAACGAAGGCTGCAACGTCCTGTCGGGGGTTGACTACCAGCAGCTCTATACACAGAACCGCCGGAAAAGATCCATCAACCCACAGCAGGACAAGAACTTCATTGCCGCTTTAGAGGCTGTGCGAACGGGAGGACTTGGATTCTGTAAAGCGGCAAAACTCTACGGAGTGAACAATCGTACATTGTGGCTTGAGTATAGAAAGAGAGGTTACCCGATAATGAGGCCTAGCACAAAGTCGCGCGCCAGTTACAATGATCCAAACAATGCGATGACCAAACAGAAAGTCGCCTCGTTGGACCATGCTTGTACCGTACAGAAAATTAAACTCGTATCCCCCTCGATATCACAGCCTCCATCTCAAACCACCACTTCCCACATAAATTCATATGATTATTATCAACCCTTTATCAATTACAATCCCTTGTGA
- Protein Sequence
- MASMAVQQFCLRWNNHQPNFISVFTNLLTSESLVDVTLAAEGKQLQAHKVVLSACSTYFQSLFTTNPCQHPIVILKDIKYCDLKTMVDFMYYGEVNVSQEQLPAILKTAETLKIKGLAEMPDQLSLSKSASQSSDKCESPSPISPSVLRRKRLRKSSTGSGSEQTSEETAASGSGSGTDIVASPIKLEPEETVLRKEPSTESEQRDSSHSFEEESYTPRNLSEEGESNIRWSSSEEATKPGTSTVQPQGWMNNEGCNVLSGVDYQQLYTQNRRKRSINPQQDKNFIAALEAVRTGGLGFCKAAKLYGVNNRTLWLEYRKRGYPIMRPSTKSRASYNDPNNAMTKQKVASLDHACTVQKIKLVSPSISQPPSQTTTSHINSYDYYQPFINYNPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00339973;
- 90% Identity
- iTF_00339973;
- 80% Identity
- iTF_00339973;