Clec002728.1
Basic Information
- Insect
- Cimex lectularius
- Gene Symbol
- bab2
- Assembly
- GCA_000648675.3
- Location
- NW:2791799-2807634[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-12 1.9e-09 36.4 0.0 1 39 395 434 395 438 0.90 2 4 4.1e-13 6.7e-10 37.9 0.1 1 39 449 487 449 490 0.94 3 4 1e-17 1.7e-14 52.6 0.0 2 45 505 549 504 549 0.98 4 4 4.3e-19 7e-16 57.1 0.0 1 43 556 599 556 600 0.96
Sequence Information
- Coding Sequence
- ATGAACCAAAGCAGGTGCCCCCAGGAGGCGACGGCGACTTGCCTTTCACTCGCCGAAGATGTCAACAACTTGGAAACAGTCTCCAGGCTACTTTCATCGCCCGAAACGGAGGAAGGAGACGAGATGGTCAACTCGCAGCACTATTGCCTGCGGTGGAACAACTACCAGTCCAACATGACGTCCGTATTTCACCATTTGCTGCGGACGCAGGCTTTCGTCGATGTCACCCTAGCTTGCAACGACCAATCTCTAAAAGCacacaaggttGTTCTTTCTGCTTGTTCATCGTACTTTCAGAAACTACTCTTGGAGAACCCTTGCAAGCATCCTACCATCATTATGCCGCAGGATGTATGCTTCACAGATCTCAAGTTCATAATCGAATTCGTATACAAGGGGGAGATCGACGTTTCCCAGGCCGAACTCCAAtcACTTTTAAAAACGGCCGACcagttgaaaataaaaggtCTGTGTGAAGTCCCTGATGGGAAGGAAGGCGCCGAGGTGACGCCGTTGCCGCATAACACTTCCAGAAGGGGTCTTTCACTCCGCCAAAGACGTTTGGCCACTGCAAAGCGCCGGCTTCAATACCGAGAACGCCTGAACCATTCCAACCAGTCGAATCTAAGCCAGATGGATTGCATGGATGTCGGTACGGTTATGGAGGACTCGAAGGAACTGCCCTCGCTGGTCGTCGTTGACCCTAGCCAGGCATCACTGGCCGACCAGGGGATGATCCTGGCCTCCAGCCCGAGGCAATTAATGCAACCCTCACACAACAATATCCAGCAATCTCAGGTTCCAGTGGAAAACGGTGGAAATGATGAAAATATGGCTGAAATGGGACGAGTACCGACACCTCCGTCAACTTTAGTCCCGACATTGGAAATACAACAATCCGAAACTCACAGAGACGTTGCAgTGGATTCTAGCGATTTAGGAGTTGTggataataatgtaaaagtcaaatttgaaactttgcGAGCGATCGAACAAGATCCCTTAGACATGGAACAGATAACGGATCAAacgGTTCAAACAAACGATGACGACCATGGCATGCACACTATGATGATCACACCGGAACTACTCGGCCTCATACCTTCATCGAATTCAGATGGAAGTGAGGCTGGAAGCACCAATGCCAAAAATGGAATCGGTTGTTCCAGTACAAAAACATGGACGCAAGAGGACATGGGAGCCGCTCTGGACGCTTTAAGAAACCAGACGATGTCGTTGAGCAAAGCCTCGTTACATTTTGGCATCCCTTCGACTACTCTGTGGCAAAGGGCGCACAGGCTGGGAATCGACACACCGAAAAAAGACGGGCCTACAAAATCCTGGTCCGAAGATAGTCTCAACACGGCATTGGACGCTCTCAGGACTGGATCTATATCGGCCAACAAAGCCAGCAAAGCTTACGGTATACCGAGCAGTACGCTTTATAAAATTGCAAGAAGGGAAGGGATTAGACTTGCCGCTCCGTTCAACGCCGTTCCGACAGCATGGGTTCCAGAAGATTTAGAAAGGGCTCTCGAGGCGATTCGATCAGGACAGTTTACCGTTCAACGGGCAGCTACAGAGTTTGGAATCCCTTCTGGTACGTTGTACGGGAGGTGTAAACGAGAAGGAATAGAACTATCTCGAAACAACCCGACACCTTGGTCGGAAGATGCCATGCTCGATGCTTTAGAAGCTGTTCgaaatGGCCAGATGAGCATAAACCAGGCGGCGATACACTACAACTTACCTTACTCTTCGCTCTACGGCCGTTTCAAACGTTGTAAATACGAGGCGGAGGGTCTTAGTTCGGGCGGGGAGATGGAAAACGATCAGCCCATGATACACCAGCAGCAACAGTCCCAAACGCAGCAACCGCAGACGCAGTCGCAAGCTCAATCGCAGCCCCAGGCTCAACCTCCACAGGCTCAGACTCAGCAACCGCAGGCTCAGCCGCAGATAATGCTCGTACAGTACCAACAACCGCTGCAGATGTATCAATCGGCCACATGA
- Protein Sequence
- MNQSRCPQEATATCLSLAEDVNNLETVSRLLSSPETEEGDEMVNSQHYCLRWNNYQSNMTSVFHHLLRTQAFVDVTLACNDQSLKAHKVVLSACSSYFQKLLLENPCKHPTIIMPQDVCFTDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVPDGKEGAEVTPLPHNTSRRGLSLRQRRLATAKRRLQYRERLNHSNQSNLSQMDCMDVGTVMEDSKELPSLVVVDPSQASLADQGMILASSPRQLMQPSHNNIQQSQVPVENGGNDENMAEMGRVPTPPSTLVPTLEIQQSETHRDVAVDSSDLGVVDNNVKVKFETLRAIEQDPLDMEQITDQTVQTNDDDHGMHTMMITPELLGLIPSSNSDGSEAGSTNAKNGIGCSSTKTWTQEDMGAALDALRNQTMSLSKASLHFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSEDSLNTALDALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNAVPTAWVPEDLERALEAIRSGQFTVQRAATEFGIPSGTLYGRCKREGIELSRNNPTPWSEDAMLDALEAVRNGQMSINQAAIHYNLPYSSLYGRFKRCKYEAEGLSSGGEMENDQPMIHQQQQSQTQQPQTQSQAQSQPQAQPPQAQTQQPQAQPQIMLVQYQQPLQMYQSAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00339988;
- 90% Identity
- iTF_00339988;
- 80% Identity
- iTF_00339988;