Basic Information

Insect: Chymomyza procnemis
Gene Symbol: -
Assembly: GCA_035046065.1
Location: JAWNOJ010000023.1:30693605-30701628[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00044 0.031 14.7 0.4 1 23 270 292 270 292 0.97

2 15 0.036 2.6 8.7 2.0 1 23 298 321 298 321 0.97

3 15 0.00066 0.047 14.2 1.7 1 23 536 558 536 558 0.98

4 15 5.9 4.2e+02 1.7 2.2 1 23 564 587 564 587 0.68

5 15 0.095 6.8 7.4 2.3 1 23 611 634 611 634 0.97

6 15 0.011 0.78 10.3 2.4 5 23 899 917 896 917 0.91

7 15 0.033 2.4 8.8 0.8 1 23 923 946 923 946 0.94

8 15 2.2 1.6e+02 3.0 1.4 3 23 984 1004 982 1005 0.70

9 15 0.0035 0.25 11.9 0.2 1 23 1026 1049 1026 1049 0.97

10 15 0.096 6.9 7.4 2.7 1 23 1246 1269 1246 1269 0.96

11 15 0.00054 0.038 14.4 2.5 1 23 1286 1308 1286 1308 0.99

12 15 9e-06 0.00064 20.0 0.4 1 23 1313 1335 1313 1335 0.99

13 15 0.0017 0.12 12.9 7.8 1 23 1341 1366 1341 1366 0.96

14 15 0.00034 0.025 15.1 0.5 1 23 1371 1395 1371 1395 0.96

15 15 0.00079 0.056 13.9 0.8 1 23 1401 1424 1401 1424 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00044	0.031	14.7	0.4	1	23	270	292	270	292	0.97
2	15	0.036	2.6	8.7	2.0	1	23	298	321	298	321	0.97
3	15	0.00066	0.047	14.2	1.7	1	23	536	558	536	558	0.98
4	15	5.9	4.2e+02	1.7	2.2	1	23	564	587	564	587	0.68
5	15	0.095	6.8	7.4	2.3	1	23	611	634	611	634	0.97
6	15	0.011	0.78	10.3	2.4	5	23	899	917	896	917	0.91
7	15	0.033	2.4	8.8	0.8	1	23	923	946	923	946	0.94
8	15	2.2	1.6e+02	3.0	1.4	3	23	984	1004	982	1005	0.70
9	15	0.0035	0.25	11.9	0.2	1	23	1026	1049	1026	1049	0.97
10	15	0.096	6.9	7.4	2.7	1	23	1246	1269	1246	1269	0.96
11	15	0.00054	0.038	14.4	2.5	1	23	1286	1308	1286	1308	0.99
12	15	9e-06	0.00064	20.0	0.4	1	23	1313	1335	1313	1335	0.99
13	15	0.0017	0.12	12.9	7.8	1	23	1341	1366	1341	1366	0.96
14	15	0.00034	0.025	15.1	0.5	1	23	1371	1395	1371	1395	0.96
15	15	0.00079	0.056	13.9	0.8	1	23	1401	1424	1401	1424	0.97

Sequence Information

Coding Sequence: ATGGAACCTCATAATTCGGCTCTTCCGGATTTTGTCGCCAGCAGTGTTCATGATAACACCTGGTACATCAAGGATGCCTTTTCTGAATGGTATTCCTTTTTACAGCATTTTAAACTAAGCCATGGTAAGTCGCAAGAGGCAGATCTGCTTTACAACGAATTTGATGAGGAGGACGACGAAATTCAAGCAGAAGTTGCCGTGGAAATGGCCAACATTAATAAAGCTGAAAGTGCGGATGAATCTGTGGACTCTGTGAGCACAAATTCTAGTACACCAAGCGTAATTTATTATGATAGGCATGAAGATAGTGTTGACAACACTATTGTTAGCCATGAAATGGACAATGAGGATGAAATTTCTTGCATGGCGTGTCGTTGTTGCCTCAAATCCGACGCGGAGTTTTACAAACTAGACTCTGTGATGGTGGCGCGTAATATTGGCTACGATGAAAATAATGTGTCTGCTTGCGATGTTAGTGAAAAGATAACGTTATTGCGTTGCTTGCTCTTTTGCATTCGTGCTGAAAACGTGCCGGAGCTGCCGCAGTACATATGTCTTGGCTGCAGCAAGAGCTTGCAAATAGCATAtcattttctacaaaatgcaCTGTGTGCACATGAGATACTATGCCACAATTTATGTCCAGATAAATCTAAAGGGCAACGTTCTACGCATTTAAATGGTAAGCAAAATCACATCATTGGCAACAATAGCAGCGAAAGGGAACGTCCACCAATACGAAGGAAATCGCCGCAGCTTGTGGACTGCGGCAATGAGGACGCATTgaagacgaaaaaaaaggtGCGTCATGAATGTAAAGTATGCGGTGCTATTATATCCAGCAGAACAGAGCTTAAGCAGCACATTCGTCTCCATTCAGacGTTTTTGcgcataaatgcaaaatgtgtgATTTTGCTTCTTCAAAGCAAAATCCGTTAATACAGCACTATAAATCTATTCACAACTTAACAGCAGCGCAAtgtgaacaaaaattaaaagcatctTGTGTTGCTGCATCAACATCTTCTTTGAACCACCAACCCATTAACCCACCAAAAACTGTGAAATCCCAACAACCCGCAAGCAAAACAACTAATAGCGGTTTTGCTGAGGAAAATACGGTAGTGTGCACATTAGAAGATATGGAAATGTTAATTCCAACCGTGCTGAGACCTGAAGACTATGAAACACCGCACATAGATGCGGAACATTTACAAGAGTTGGAAAAGCAGTTGTCAGACACTATAGAAGCATCAGCAGCTAATGCTGCAATTATTGATGAAAATGATCCAACACTTGAGCTGCCTCGAAGCACTAGAACTTCAATTACGCCCAGCAATACCCAAACAATTAATGAAAGTGATAGCAATTTGGCCATAGGCACAGAGTACTTAGTAATGCCGGATGGCTCGTTGCAACCGATAAACGGCGATGgtgtaGTTATAGAGTACATAAATGCTACAgatgacaaaaacaaatcagaTAAAGATTTCGTTATAGCAGGGGATAACAACGCTATGCCAATGGAGTTTGATGTTAACGAGCTTATAGTTGAAGAAGTGCAGCCAAAGCGAACGAGAGGTGCACCCCGAGCCACCGTAAGATTCAAATGCGAACAGTGCCCGAAGTCCTTTGCAACAGCGGCGCGTCTTCAATGCCATCAGTTAACCCACAGCAATTTACCCAAATTTTATTGTGATCAATGCGCCTTCTACTCGCTGCGCAGCTCGGAGCTAATGCAACACCATAGGGAAATGCACAACATCGAGTCCGCAAGCGTGCTGAATGATGTTCAAAACGCTTCAGTACCAATGGATGAGAGTCAAATTTACTCGTGCGATATGTGCCTTTTTGAGACAAAAAGCTCTACCCAGTTACGCTTGcactacaacaaaaagcataaaacaaaTGCGTCAGATGTGGAGCTGCGTCCTAGTTggtGCGTAGAAAGTACTGGTGCTGCTGGCTCATCAAGTCAGGCAGACGGAAGCAGtggcaagcagcaacaaacatcGGAACTTCCGCTTGGAATTCAATATCCACGGACGACAAACGCAACAGTTAGCTTGGCAAACGCTGAACAATTAGTCACAACTGCAGCTACAAGTATGAAGCATGCTGTGCAGTACTCAACGGCGGGTTCGACACTGCTTTGTAACTCCAACTCGCGTCTGAAGGCAGCCGACGCAAACGTGCCACCTGTTTTGGTCGCAGATGCAACTAAACCAACGAGAATTTTGCCAGCAGTTGATAgcgaaaacaattttacaatatttccgCAAATCTCAGCCAATGTGGTAAACAGCGCAGATAAAATGACAACGCTGCCCATAACTACAGGCAGTGTTGCTGTTTCGATCATCAGCGAAATGCAGGATTTCATAGATGACACTGATGTGGCAGCCATTTGCACAATACCGGCAGATGGTTTGCCTGTTGTCGATGGCGATGATATTGTCAtagacaataataatattaacttggACTTTGATGCTGAAAATCTCTTTGAAGACTTTGATGACGACGAGGATGATGGCGAGGCCGAAGAGGAAGAAGACGATGCAGATAATGATGATGAGAATGATAACAATGATGCAGCAATTGatcaaaacttattattaacCAGTGACGATGACGACGTCGACGATTTTGATGATGAACAATCTCGTCATTTGCAAAAGCCATACTGCAtcttttgtaacaaaaagtttactaGTCAGTATAAGTTTGAGAATCACATGTTCTTGCATCGCGGCTTGGCTCCCTATCGTTGCGAGCTCTGCaccaatatttataataaaaaacgagCACTTATACGGCATTTCAAAGCTGTGCACAAGCGCATGCCCACACGTGATATGGTACAGGCCAAAGGTGACAAAATATCTCTAAATCgtacaaatattgaaaacttgCATTTGGACAAAGATAAAGcGCCCGCCATAATGTGCGCAAAATGTCCTTTCGAGTGCGAACTGGAAACTGATATGCAAAGACATTTGAATGCTCATCATGGGATAAATGATGGTGttACTTGTAATGCTAATGGCGTTTTCATTATACGCAagCTGCCCTTTGAGTGTCCGCGTTGTATACGCACTTTTGCTGCAAAAGGCGCGCTAACGCGACATTTGCAGCGCAGTCATCTTGTGGACACTATAATCGAATTGCAATGTCCTCCAATGCCAACAACGTCCGCGATCACAAGTtccgcaacaacaaccaccacCTCCACACCGACTACAACCTTACCAAATGCTAATgaaattgcaacaaacaagGCGGTGCCTGAGCAGCTTGTGGCAGGTGAATGCGCACGAACAGCCGTTTTGCCAAAGCcaacacaaaaatatcaatataaatttcatgaCGCCAAGGAGACGATCACAATGACGACAAGCACCGAATTATCAACAAGTCTGCATATAAGCACCAACAGCATAGAATCCACAATGACACCATTGCCTGCAAATATAGCCTCCACGCTTTTTCCCTCGCCCACATTCCATTCGTTCGATTTCGATTACTATGATTTAATGGATGAGACACATGCCGCTGTCCAGCAGCTTGTTAAGCGTGAACCCGATCAGCACAACAGCTATACGGACGCATTTGGCGCATCCAGCAATTACAATCATGTGCTGCGTGATGATAAATTATTACCAACGCCACTGCTATGTCAGGACACTTCGCCGGTTAAAGATTTACGCAGTTATCTGCCGCGTACGCCCATCTTTGTTTGTCGTAAATGCAACTATACCTGCGATGAACTGAACAAACTAAATCAACATCAGGCGAGGGAGCATGAGCATGCCAATAACGCTGATACCACAATGCCGCGTCGTAACTATGACTTTAAGTGCAGCATCTGCAATAGCACGTACCGCACAATAACGCTGCTCCAATACCATATGAAGCGTCATGACAAACGCAATTACAAATGTGACTTGTGCCCCAAAACGTTTGTGGTGCGTCCAGAGCTAACCAAACACAGGATCACACATAGCAAGGAGACGCCATTTAAATGCCACGTTGAGGGCTGCCAAAAGGCATTCAACTATAAGCATCATCTCAAGCGTCATTTTATGTCCACGCATCTGCGCAAGCGTTATACATGCACCATGCCAGAGTGTGGCAAAGAACTGGCATCCAGTTCACAGCTAGCGCAGCACATGCATTTTCATATGGgcacacatgcatacaaatGTCCCAGGTGCAGCCGCGCTTACACGAGACGCAAACCTTTGCGCATGCACGCAATGCGTGAGCATCAGTTGCAGCTTAGCGAGGATGATCTTGCGGATATATATCGCGCCAATGTGGGCTACACCAATCCGCATGACCTGAGGGTATTTACAGGCAATGGTGAATTGTTGCGGCGTTCCGCAGTtgaagctgctgcagcaaataAACAGCGCACCGAACTGGAGGAAGCTGTTGTAAATATTAGCgcttag
Protein Sequence: MEPHNSALPDFVASSVHDNTWYIKDAFSEWYSFLQHFKLSHGKSQEADLLYNEFDEEDDEIQAEVAVEMANINKAESADESVDSVSTNSSTPSVIYYDRHEDSVDNTIVSHEMDNEDEISCMACRCCLKSDAEFYKLDSVMVARNIGYDENNVSACDVSEKITLLRCLLFCIRAENVPELPQYICLGCSKSLQIAYHFLQNALCAHEILCHNLCPDKSKGQRSTHLNGKQNHIIGNNSSERERPPIRRKSPQLVDCGNEDALKTKKKVRHECKVCGAIISSRTELKQHIRLHSDVFAHKCKMCDFASSKQNPLIQHYKSIHNLTAAQCEQKLKASCVAASTSSLNHQPINPPKTVKSQQPASKTTNSGFAEENTVVCTLEDMEMLIPTVLRPEDYETPHIDAEHLQELEKQLSDTIEASAANAAIIDENDPTLELPRSTRTSITPSNTQTINESDSNLAIGTEYLVMPDGSLQPINGDGVVIEYINATDDKNKSDKDFVIAGDNNAMPMEFDVNELIVEEVQPKRTRGAPRATVRFKCEQCPKSFATAARLQCHQLTHSNLPKFYCDQCAFYSLRSSELMQHHREMHNIESASVLNDVQNASVPMDESQIYSCDMCLFETKSSTQLRLHYNKKHKTNASDVELRPSWCVESTGAAGSSSQADGSSGKQQQTSELPLGIQYPRTTNATVSLANAEQLVTTAATSMKHAVQYSTAGSTLLCNSNSRLKAADANVPPVLVADATKPTRILPAVDSENNFTIFPQISANVVNSADKMTTLPITTGSVAVSIISEMQDFIDDTDVAAICTIPADGLPVVDGDDIVIDNNNINLDFDAENLFEDFDDDEDDGEAEEEEDDADNDDENDNNDAAIDQNLLLTSDDDDVDDFDDEQSRHLQKPYCIFCNKKFTSQYKFENHMFLHRGLAPYRCELCTNIYNKKRALIRHFKAVHKRMPTRDMVQAKGDKISLNRTNIENLHLDKDKAPAIMCAKCPFECELETDMQRHLNAHHGINDGVTCNANGVFIIRKLPFECPRCIRTFAAKGALTRHLQRSHLVDTIIELQCPPMPTTSAITSSATTTTTSTPTTTLPNANEIATNKAVPEQLVAGECARTAVLPKPTQKYQYKFHDAKETITMTTSTELSTSLHISTNSIESTMTPLPANIASTLFPSPTFHSFDFDYYDLMDETHAAVQQLVKREPDQHNSYTDAFGASSNYNHVLRDDKLLPTPLLCQDTSPVKDLRSYLPRTPIFVCRKCNYTCDELNKLNQHQAREHEHANNADTTMPRRNYDFKCSICNSTYRTITLLQYHMKRHDKRNYKCDLCPKTFVVRPELTKHRITHSKETPFKCHVEGCQKAFNYKHHLKRHFMSTHLRKRYTCTMPECGKELASSSQLAQHMHFHMGTHAYKCPRCSRAYTRRKPLRMHAMREHQLQLSEDDLADIYRANVGYTNPHDLRVFTGNGELLRRSAVEAAAANKQRTELEEAVVNISA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00336198;
90% Identity: -
80% Identity: -