Basic Information

Insect: Chymomyza procnemis
Gene Symbol: Znf574
Assembly: GCA_035046065.1
Location: JAWNOJ010000023.1:26381845-26384005[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0015 0.11 13.0 0.2 6 23 348 365 348 365 0.98

2 9 2.7e-05 0.0019 18.5 1.3 1 23 371 393 371 393 0.99

3 9 5.8e-05 0.0041 17.5 1.0 1 23 407 430 407 430 0.96

4 9 7.6e-05 0.0054 17.1 1.5 1 23 438 461 438 461 0.97

5 9 2.4e-05 0.0017 18.7 1.3 3 23 469 490 467 490 0.92

6 9 0.019 1.3 9.6 0.0 2 23 502 524 502 524 0.96

7 9 5.6e-05 0.004 17.5 4.9 1 23 531 554 531 554 0.95

8 9 4.7e-07 3.4e-05 24.1 1.3 1 23 560 582 560 582 0.98

9 9 7.4e-05 0.0053 17.2 1.3 1 23 588 611 588 611 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0015	0.11	13.0	0.2	6	23	348	365	348	365	0.98
2	9	2.7e-05	0.0019	18.5	1.3	1	23	371	393	371	393	0.99
3	9	5.8e-05	0.0041	17.5	1.0	1	23	407	430	407	430	0.96
4	9	7.6e-05	0.0054	17.1	1.5	1	23	438	461	438	461	0.97
5	9	2.4e-05	0.0017	18.7	1.3	3	23	469	490	467	490	0.92
6	9	0.019	1.3	9.6	0.0	2	23	502	524	502	524	0.96
7	9	5.6e-05	0.004	17.5	4.9	1	23	531	554	531	554	0.95
8	9	4.7e-07	3.4e-05	24.1	1.3	1	23	560	582	560	582	0.98
9	9	7.4e-05	0.0053	17.2	1.3	1	23	588	611	588	611	0.97

Sequence Information

Coding Sequence: atGGCAGCCTGTGTAATATGCATGGAAAAAGGCCGAACGGGCATCGGTATTTTTAAGGATGAAGGCTTGCGGCATGGCATTTGCGAAACCGTAAACAAACACTTTTGGCTAGAGCTCAACGTCACAGATAATAGTGCCGATGAAATATGCTGCGACTGCTGGGCAATTGTCAACAGTTTTCATGAGTTCTATGAACGTGTCTACCAAGTGCATCAACAAATACGCAATGGTAATCCCAATAATGTTCCAAACGAGTTTTTTGGCGAAACATTAAACGCACTCAATGAGGAATACTTTGCACCCGGCGAAATTAAGCTGGAAGTAGATGATTGGGAATTTTTGCCCAAGAATGAAATGCTGGAAGATCCAGTGAATACGGATATTAAAATTGCACCCAAGCGTCAAAGTCGCAACAACTGCAAGTCACCCGctaagaaaaaaagcaaaccaacTATAAAAACTGAGAAAATTACGTTTGAAAGTGATTCGGATGCGGATATACCTCTTGCGGAGTTGAAAGCCAACGATTTAAAATTGGATACAGTAAATACGCAGACAACAACGCAGTCAGTTGAGTCACAATCGCAACGTTATTTACGTCCTCGAAAAACAAACGATTCTTTAATTGAAGCTCTAAAGCAAGAGCTGCCTAGCGACAATGAAAGCGATATGGATGCTGCAGGCGATGATGCTGCTTTTGAAACAGAAGACAGCGCCAGTGATAGTGACTTCAGTAATGGTGACTCAAATAGAAGTCTGCCAGACATAGAGCCCGAAGAGCGTTATGCCGAAATACCCAAGCGCGTTGTAGTAAAGCCCAAGAAATACCGCAAGCGTCCCAAACCCTTAGTGCCACCAGTGCGTTTAAGTCGTGAGGAGATACAGCgtcgaaaaaaacaacaggAGGAGTACGATGAAATTATATTGAAGTTCTTTAAAAAGCTGGCCTGTCCCATATGCAATCTACTTGTGCTTAATTTTACCGACATGGGTCGTCATCATCGGCTCACACATCAAATCGAGCCTGGCTACATGACCTGTTGTGGTCGAAAGTTTACGCAACGTAAAAATCTGGCTGAGCATGTGCTGGTGCACTGGAATCCCGATCACTTTAAATGCACACAGTGCGAACGCATTTTTCAGGACTCACGCACATTGGAGGTGCACCAGCAAACGCATATAAATCCTCAAGCAGAAGGTGGCAAGGAGCCTAGCGTTTTCACTTGTGAAAAATGCCCTAAAACGTTTACTAAAAAAGCAGTTCTCGAATATCATCTTATATCCAAGCATGTTCCCAAATCGGAGTTTAAGTTTACTTGCACTGAGTGCAATAAGAAACTTCCAACGGAACGCAAATTAAAAGCACATATGAAATATATGCACGATCCAGAGAAGGCAATTATATGCGACAAATGTGGAAAATCTGTGCGATCCCAGACAAATCTCAAAAAACATCATGAGCTGGAGCATTCAGAAGGACCGCGTGCGAAGCCGGAGCCAGCCCAATGTGAAATTTGCGGTACTTGGTTACGCGATGCTTCTGGCCTAAAACAGCATGTAGCCACTGTGCATGAGGCAGCTGGCGGAGAGCATCGCTGTcacatttgcaacaaaacttcGACTAACTCACGTGCGCTTAAGCGCCATATACTTTATAATCATGAGTGTGAACGGAAGTTCAAGTGCACCATGTGTGATAAGGCCTTTAAGCGGCCACAAGATTTAAGAGAACACACATCAACGCACACCGGCGAGGTGCTTTATACCTGTCCAAACTGCCCCATGACTTTCTTTTCCAATGCCAATATGTACAAACATCGTCAGCGCTTGCATCGCGCTGAATGGGAGGCTGATCGCAAGAAACCTCGTCCACCCAATATTATGAAACAATCTATGGGTGCTACGTCGGCTATGAAAAAGCGACAGAGTTCGAATATTAACGCTGGTGGCCTATTGACACAAGAATTAGATGCCCAATTAACATTAACGTGA
Protein Sequence: MAACVICMEKGRTGIGIFKDEGLRHGICETVNKHFWLELNVTDNSADEICCDCWAIVNSFHEFYERVYQVHQQIRNGNPNNVPNEFFGETLNALNEEYFAPGEIKLEVDDWEFLPKNEMLEDPVNTDIKIAPKRQSRNNCKSPAKKKSKPTIKTEKITFESDSDADIPLAELKANDLKLDTVNTQTTTQSVESQSQRYLRPRKTNDSLIEALKQELPSDNESDMDAAGDDAAFETEDSASDSDFSNGDSNRSLPDIEPEERYAEIPKRVVVKPKKYRKRPKPLVPPVRLSREEIQRRKKQQEEYDEIILKFFKKLACPICNLLVLNFTDMGRHHRLTHQIEPGYMTCCGRKFTQRKNLAEHVLVHWNPDHFKCTQCERIFQDSRTLEVHQQTHINPQAEGGKEPSVFTCEKCPKTFTKKAVLEYHLISKHVPKSEFKFTCTECNKKLPTERKLKAHMKYMHDPEKAIICDKCGKSVRSQTNLKKHHELEHSEGPRAKPEPAQCEICGTWLRDASGLKQHVATVHEAAGGEHRCHICNKTSTNSRALKRHILYNHECERKFKCTMCDKAFKRPQDLREHTSTHTGEVLYTCPNCPMTFFSNANMYKHRQRLHRAEWEADRKKPRPPNIMKQSMGATSAMKKRQSSNINAGGLLTQELDAQLTLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00336964; iTF_00337773; iTF_00336158; iTF_00338591;
90% Identity: iTF_00338591;
80% Identity: -