Basic Information

Insect: Chymomyza procnemis
Gene Symbol: zfh1
Assembly: GCA_035046065.1
Location: JAWNOJ010000026.1:22802836-22807149[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.7e-05 0.0019 18.6 1.0 1 23 151 173 151 173 0.97

2 15 0.0063 0.45 11.1 1.9 3 23 181 201 179 201 0.93

3 15 8.9e-05 0.0063 16.9 0.1 1 23 337 359 337 359 0.98

4 15 0.0018 0.13 12.8 0.6 1 23 365 387 365 387 0.98

5 15 6.4e-05 0.0046 17.4 4.5 1 23 417 439 417 440 0.94

6 15 0.026 1.8 9.2 0.7 1 23 466 488 466 488 0.91

7 15 0.019 1.3 9.6 1.1 1 23 494 517 494 517 0.97

8 15 0.011 0.79 10.3 0.9 1 19 524 542 524 543 0.95

9 15 0.00015 0.011 16.2 5.6 1 23 552 574 552 574 0.97

10 15 0.046 3.3 8.4 0.3 3 23 581 601 579 601 0.96

11 15 9e-06 0.00065 20.0 0.3 1 23 610 632 610 632 0.98

12 15 0.001 0.073 13.6 0.1 3 23 640 660 638 660 0.97

13 15 5.5e-05 0.0039 17.6 0.5 1 23 666 688 666 689 0.95

14 15 0.027 1.9 9.1 0.2 1 23 699 721 699 721 0.96

15 15 0.0053 0.38 11.3 0.3 1 23 1264 1286 1264 1286 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.7e-05	0.0019	18.6	1.0	1	23	151	173	151	173	0.97
2	15	0.0063	0.45	11.1	1.9	3	23	181	201	179	201	0.93
3	15	8.9e-05	0.0063	16.9	0.1	1	23	337	359	337	359	0.98
4	15	0.0018	0.13	12.8	0.6	1	23	365	387	365	387	0.98
5	15	6.4e-05	0.0046	17.4	4.5	1	23	417	439	417	440	0.94
6	15	0.026	1.8	9.2	0.7	1	23	466	488	466	488	0.91
7	15	0.019	1.3	9.6	1.1	1	23	494	517	494	517	0.97
8	15	0.011	0.79	10.3	0.9	1	19	524	542	524	543	0.95
9	15	0.00015	0.011	16.2	5.6	1	23	552	574	552	574	0.97
10	15	0.046	3.3	8.4	0.3	3	23	581	601	579	601	0.96
11	15	9e-06	0.00065	20.0	0.3	1	23	610	632	610	632	0.98
12	15	0.001	0.073	13.6	0.1	3	23	640	660	638	660	0.97
13	15	5.5e-05	0.0039	17.6	0.5	1	23	666	688	666	689	0.95
14	15	0.027	1.9	9.1	0.2	1	23	699	721	699	721	0.96
15	15	0.0053	0.38	11.3	0.3	1	23	1264	1286	1264	1286	0.97

Sequence Information

Coding Sequence: ATGAACAATCAAGGCTATGGCGGCATCCAATGGATACAACACCACAACTCTGTGGTTGAGTCGGAGGATGAAATATTGGAAAATGGCGATGGCAACGATGCTGACGCAAATGTTGCGTATCTGGTGAATGAAAACGAAAGGGATGAGGATTTGGATCATATGGCAGCCGAAAATCTAATTTTCATGGCACGCGATGGTCAGTTAAGTGAGATTATCGATGCAAGTGGCACAGGTGGCACTGTGCTGGTTGCTGATGATGGCAGTGCTGTAGCCTATGCAGAATCATTTGATGATGATGCGCAGGTTGTTACCGAGGAGGTCATCACTGATGACTGGGTGCAGCATCAAGGCGCGGAGCGcgtGGTAATTGCCGCTGAGCAAATTGCTGGACCTAGCAGCTCACAGGAGCTTTTGGATATGGAACAGGATGAGTATACAGCTTTGCGTCCGTATCCTTGTGATTTTTGCAGTCGCCGCTTTCGCAAAAAGGCCAGTCTTAACAATCATATGCTGGCGCATCAAAATGACCGACCGCATTTATGCCGACTTTGTGGTGCTAGATTCTCCAGACGTGAGGAGTTATATAATCATTTCAAGGCACATGCCGAGGCACAAGATGCAGCCGATACAAAGGCCATTCTAGAGGCCACTGCCGCTGTTAAATTTGAGCCGCAGCATAAGTTTTTGGACGATCATTACTATGAACACGAGTGGCCTAGTTCGTATCAAGCagctgcaaataataataccaGCCCCAGCGAAACCAACTATCTGACAGGCGAGAGCTGTACGGCTGTACCTACCGCGCAACGTGGTCGCATTAGTCGTCTTAAGCCCAAAGAGGAGGCAAGTCAATATATTCTAACTGCCGATAAGCCATCGATAGCTGAGCTGGAGTATATGGAATGCGCACAGTCACAAGCAACAGCCACCACGGCTGATTTAAGCCAAGCCACACAGCAACAGCCAGCTGCTGCACGCTTTCCAGTGCTAGACGATAGCAAGCCGTTTGTTTGTCAGCAATGTGGCTTGGCATTTGCGCGAGAGAAAGCCTTGGTATCCCATATAAAGAACCATCGTGTGGACTCGCCATTTGAGTGCAATCAGTGCCAGGAAATGTTTTGGGATAACAACAGTCTGCTCGAGCATCAAAAAACGCATCAATTTGAGGAGAGTAATTCGGAGTACGATCCTACCTCAGCTGAAGATAGTGCCTCCGATTCAGAGCCAGAGCAGTTGTATGGTGACTTTTTCTGCAACGATTGTGGCATTAGTTTTCATCGACAGGATCTTTTGCGTCGCCATGCCAAGCAGCATCATAAGCAACATATAGCAGTTTCTAAAAACTTGCCCATAACTGCCGACAGTGTTGACGAGAATGCCAAAGATGCGGCACATAGCTGTACAACATGTGGCAAGTCATTTCCCTGTCCGTTGGAGCTACTAGCTCACGCAGAAATACATGCGCGTTTCCCGCCATTTAAATGTGTGCTGTGCGGCGTCAGTTTCTATGGCGAGCAAGCCATTAAGCGTCATTTACACACACGTCATCCTCACGAGCTTAAGACACATTCGTGTGTGCTCTGCGGCAAGGAGTGTCGTGATCGCAAGGCGCTCATCAAACATGCTTGGGATCACTCACGTGAAAAATGTCATTCGTGCTCCAAGTGCGGCAAGAATTTTCATAACAAAGCACGCTTAAAGCGTCACATGGCCTCACATCGTGATAAATCGGTAATCTGTGAGGTCTGCCAAGAAGAATTTCCCGATGGACGTTCTCTGTCTAATCACAGACACTCGCATAGCACAACTTCAACGGGCAAACTATTTCCATGTAATGAGTGCGGCAAAACGTTTGGCTCGCGCAGCTCACAGCAGATTCATGTGCGTATACATACAGGTGAAAGACCCTATGGTTGTCGTTATTGCTGGAAAGCCTTTGCCGATGGTGGCACATTGCGTAAACACGAGCGTATTCATACTGGAGAGAAACCGTATGCGTGTTCCGTCTGTCCACGTGCCTTTAATCAGCGTGTAGTGCTGCGTGAGCACATACGCTCCCATCACTCGGGCATGGATGTGACACGTGGAACGTACTTTTGCACTGTTTGCTCGGCAAATCTAACGACTTCCAATGAGCTTATACAACATCTTATTCAGCACAGCGACTCGAATACAGCAAAACAGAGGCAGCCAATTacGGGGCCGCGTAAATACAAGCGCCGACGTAAGCTACAGCCACATGAGATTGCGAATCGACGTGGTGAAAAGCAAGACGGCGAGGCTGAGGAATGTGCCAGTGATATGGATGCGTGTGAATTTGATGTAGACAATGTAGATGATTTATTAGATGCAGCAGAGCCACCCAGCAAGAACAGCAACAGAGCCAAGCGTAAAAAAGGCAATGCAAGCTCCAAGACTGCTGCAAATGGTAAAGCCACGCAGGCGCCAGAACAAGCTAAACAAACCGtggataataataaaacgGGCAATATGAAGATACGTTATGACTCCACTGGCAGTAATTCGGATCGTTTGTGGGcagaaaaatttatgcagGACACCAATCAAAGTGCAGAcgatacattttttcaaattgactCTCTGGTAGTAGTCAACGATACCACCTTGCCAGCCAGCAGTATCCCATGTGTGACCAAAACGCGTCGTAGTGCCAAGCAGCCAATCAATAGAGCAgctaataatttaaacattaaatcaaCAGCAGCATCCGAGCCGACTAACAATAACAGCATAACCTCCAACAGCAATAGTCGTagcaaaagaaaaccaaacaaagCGGCCAAGACTGAAACGAACACAAACTCCACCCGTCCGCGTATGATACACACGGAGAAATCACGCGTGCCGGCTGCCGTACAGGACACAGCAACCAACGCCAAAAAGGCACGCGCAAAGACAATTGTAGCACGCTCGGATACTAGCAGCCTTGGTTTGCTGCCCAGCGTTAAGTCCAGTAGTACTGCACGCACTAGCACATCAACTATTGTAGATGATTATGAAATCATATCACCCGCCACACAGCCTCCAAACCAGATCAGTTCCAGTCCTTTGCATATAAAGCAAGAGCATGAGCAACAGCGTGTGCAGCTTATGTACGATGATACGCATCTGCTGATTGATGCTGCTTTGCTGCGTGAGAAGGCCTATGAAAAGTTTAATCCAAGCATTGTCAATGATTTGGAGGAAATTTTACGCTCACCGCTTAAATCCGAACGCAATATGCGTCTGCGTTTTACCAGCGAAAGCTCAACAACGCCACAATTTCTGCCAGAGGAGGATCAAAACATGATCAAAATAGAGCCCACATCGCCAGATTTGCgtgaaattattgaaagtCAACAGCGGATTGTAAGTAGCACAAGCTCAGCTGCGCGCACCACACGTCATCTCAGACGGCCCAATGATAGTAAAAAATGCCAGCTTGAAATCAGCAGCACGCTCGCAAGTCAACCACGTGCGGCAACCAAACGTGGCAGCAATAAGACAGCAAGTAGCAATGCGCAGAAGAAGAACACTACCACGATACGCTCACAAACTGCAGCGCGCACCACAACCAAAACGAACTCAGCGAGCAGCTCAGCTACCTCATCGTCGTACCTCAGCTATGGAGAGGATGCTTACAATGTGAACGTACCTGCTAGCTCGAATACAGCTGATGTCAGCTCGGGTTTCTTTTCCATATCCGAGGTGGTGTCTGCAGCGGATGCAGCAGATGCTGCTGCCAAAGCAGCAGCCGCTGTCAAGCCCGAGCGCAAGGTACGCTGCTTTGAGTGTGAAATGTGTACGGCCATATTCTACGATCGCGCCCAGCTACTGGATCATgtacacatacatatttag
Protein Sequence: MNNQGYGGIQWIQHHNSVVESEDEILENGDGNDADANVAYLVNENERDEDLDHMAAENLIFMARDGQLSEIIDASGTGGTVLVADDGSAVAYAESFDDDAQVVTEEVITDDWVQHQGAERVVIAAEQIAGPSSSQELLDMEQDEYTALRPYPCDFCSRRFRKKASLNNHMLAHQNDRPHLCRLCGARFSRREELYNHFKAHAEAQDAADTKAILEATAAVKFEPQHKFLDDHYYEHEWPSSYQAAANNNTSPSETNYLTGESCTAVPTAQRGRISRLKPKEEASQYILTADKPSIAELEYMECAQSQATATTADLSQATQQQPAAARFPVLDDSKPFVCQQCGLAFAREKALVSHIKNHRVDSPFECNQCQEMFWDNNSLLEHQKTHQFEESNSEYDPTSAEDSASDSEPEQLYGDFFCNDCGISFHRQDLLRRHAKQHHKQHIAVSKNLPITADSVDENAKDAAHSCTTCGKSFPCPLELLAHAEIHARFPPFKCVLCGVSFYGEQAIKRHLHTRHPHELKTHSCVLCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVICEVCQEEFPDGRSLSNHRHSHSTTSTGKLFPCNECGKTFGSRSSQQIHVRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSGMDVTRGTYFCTVCSANLTTSNELIQHLIQHSDSNTAKQRQPITGPRKYKRRRKLQPHEIANRRGEKQDGEAEECASDMDACEFDVDNVDDLLDAAEPPSKNSNRAKRKKGNASSKTAANGKATQAPEQAKQTVDNNKTGNMKIRYDSTGSNSDRLWAEKFMQDTNQSADDTFFQIDSLVVVNDTTLPASSIPCVTKTRRSAKQPINRAANNLNIKSTAASEPTNNNSITSNSNSRSKRKPNKAAKTETNTNSTRPRMIHTEKSRVPAAVQDTATNAKKARAKTIVARSDTSSLGLLPSVKSSSTARTSTSTIVDDYEIISPATQPPNQISSSPLHIKQEHEQQRVQLMYDDTHLLIDAALLREKAYEKFNPSIVNDLEEILRSPLKSERNMRLRFTSESSTTPQFLPEEDQNMIKIEPTSPDLREIIESQQRIVSSTSSAARTTRHLRRPNDSKKCQLEISSTLASQPRAATKRGSNKTASSNAQKKNTTTIRSQTAARTTTKTNSASSSATSSSYLSYGEDAYNVNVPASSNTADVSSGFFSISEVVSAADAADAAAKAAAAVKPERKVRCFECEMCTAIFYDRAQLLDHVHIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00336126;
90% Identity: -
80% Identity: -