Cpro011792.1
Basic Information
- Insect
- Chymomyza procnemis
- Gene Symbol
- -
- Assembly
- GCA_035046065.1
- Location
- JAWNOJ010000024.1:7574063-7576144[-]
Transcription Factor Domain
- TF Family
- THAP
- Domain
- THAP domain
- PFAM
- PF05485
- TF Group
- Zinc-Coordinating Group
- Description
- The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion. It features the conserved C2CH architecture (consensus sequence: Cys - 2-4 residues - Cys - 35-50 residues - Cys - 2 residues - His). Other universal features include the location of the domain at the N-termini of proteins, its size of about 90 residues, a C-terminal AVPTIF box and several other conserved residues. Orthologues of the human THAP domain have been identified in other vertebrates and probably worms and flies, but not in other eukaryotes or any prokaryotes [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2.6e-15 2.3e-12 47.5 4.1 1 85 17 85 17 87 0.84 2 6 4.2e-13 3.8e-10 40.4 2.3 1 86 121 189 121 190 0.79 3 6 3.5e-14 3.2e-11 43.8 0.6 1 86 364 432 364 433 0.79 4 6 1.5e-17 1.4e-14 54.6 2.2 1 87 448 518 448 518 0.83 5 6 3.6e-07 0.00033 21.4 1.8 1 58 531 579 531 593 0.87 6 6 5.6e-13 5e-10 40.0 0.7 18 87 596 657 585 657 0.79
Sequence Information
- Coding Sequence
- ATGGCTTTAGGTGACAGACGAAAGAGAAACAATTTCTCAGCCGATCGTTGCTGCATAAATGGCTGTAATCTCACTAAACACGACAATGTGAAACTTCATAGTTTCCCGAAGAGTCCCAATTTACGAAATAAGTGGGTGCACAATACGCAAGTGCCCTACGATGAGCAATTTTCGTACCGCTATCGTATTTGCGACTACCATTTTGTGAAGAGATGTTTTAAGGGCAGCCGTCTTCATCAGGGTGTAGTTCCGACGCAACGTCTGGGTCTACATACACCAATAGAGTTATATAGCAACTGCACATCGTACAATGCAAATCGTGACCCTGGTGCCTTCAAACCAAAAGTCTCGACGCAACAATGCTGTATAAATGGCTGTGGTGCTACCAGACGTGAGGCTAAATTACATTCTTTTCCAAAGTCAAAGCATTTGTTATCTCAATGGGTGTTTAACACCAAAATAGAGGTTGACCCTAAGTGCTTATGGCGCTATTGTATATGCGAAGCCCACTTTGAGCGCGAGTGCTTCATTGGCGGTCGTTTACAGAGGGGAAATGTGCCCACGCTGTATTTGAACGCAGAGTTGGAGTCAGTGCAGGAGTATGAAAGCAGCGATCTGGCGGAGAATTCCATGGACATGCATAACAGTGCTTTGGCATCGGATGAGTCAGAGTCGCAGGCTTCCTACATTCAGCCAATGCAGGAGCATGAAAGCAGCGATCCTGCAGAGAATTCCTTGGGCATGTTTATTACATACGTTGTGCCAATGCATGAATTCGAAAGCAACGAAATGGCAGAAAATCTTACGTTCATGCAGAGCAATGCCTTGGAATTGGATGGGGATATCGAAAAGgagtttttgttcttttttggaCCAGGTCTCAAAACTTTGCAGCTTCCATCTAATGTTCAGCCAATGCATGAGTATGAAATCAGAGATTTCGCAGCGAATCATTTGGACATGTATGACCATGTGTTAGCATCGGATGAGAAACCAGAGCTCGTTACGTGTGTACAGGACGAAGGAATTCACCCAGCCTCTGACACAAACGCAACCCAACAGAAACTGCGGAAAAGCATGCCACGAAAATGCGGTCTGATGCACTGCCAAAAGCAGGAGGAACAACACGGCGTGCAGTTATTCGAGTTTCCTAGCTCGGGGCTAATGCGAGACCAGTGGCTCCataatttgcacataaaaaataatgaacagCATCCCCACTCGATATGCAGTGTGCACTTTGAGTCGCGTTacataaagaataaaaaacttatgaaAGGGGCTGTACCAACGCTGCAGCTTAGCAAAAACCAGCCAAAGATCAGGATGAGTGGATTCAAATGCTGCTTGCAGCACTGCCGCCAACAGCGCgatacaaatattaagttatttcGTGTGCCAAAGAACAAAGACTTGCGTCGACAATGGGAGAACGCCGTAGGCGTAAAGTGGCCAGCTGCATCATCGAACAAGTACAAAATGTGCAGTCGCCATTTTGAACCACAACTTATTGGTAACATACGTTTGAAGCCCAACGCAGTGCCAACATTACATTTGGATTCTATGCAAGGTACAGAAGAACCGCCGTCCTGTTTTATATCATATTGCAATTCTGATACTTCAGTGCATCGTTACAAGTTCCCGGACGATCATGCGCTCTTGCGACAATGGTGCACATGTCTGAAGCTAAACAATGTGACGAGCTTTAGAGGCAAATATGTATGTGCCAATCATTTGCCCGTGATACCAACACACTGCGCCATTTGTGGAACAAATGATCTGGAACTTCCACTACAGATATTCCCAGGAAATCGAGCTGTGCGCAAGAAATGGTGCCATAACTTAAAACTTCCTGTAATTAACAAATGGAATTTTAATCATACTCTCTGCTCCAAGCATTTTGAAGAGAGGTGCTATACAATGGCGAGTGGGGAGAAAATTTTGCGTACAGATGCCGTACCGACATTGCATCTTAATAATTCggattcaaatatttttcaaaataattaa
- Protein Sequence
- MALGDRRKRNNFSADRCCINGCNLTKHDNVKLHSFPKSPNLRNKWVHNTQVPYDEQFSYRYRICDYHFVKRCFKGSRLHQGVVPTQRLGLHTPIELYSNCTSYNANRDPGAFKPKVSTQQCCINGCGATRREAKLHSFPKSKHLLSQWVFNTKIEVDPKCLWRYCICEAHFERECFIGGRLQRGNVPTLYLNAELESVQEYESSDLAENSMDMHNSALASDESESQASYIQPMQEHESSDPAENSLGMFITYVVPMHEFESNEMAENLTFMQSNALELDGDIEKEFLFFFGPGLKTLQLPSNVQPMHEYEIRDFAANHLDMYDHVLASDEKPELVTCVQDEGIHPASDTNATQQKLRKSMPRKCGLMHCQKQEEQHGVQLFEFPSSGLMRDQWLHNLHIKNNEQHPHSICSVHFESRYIKNKKLMKGAVPTLQLSKNQPKIRMSGFKCCLQHCRQQRDTNIKLFRVPKNKDLRRQWENAVGVKWPAASSNKYKMCSRHFEPQLIGNIRLKPNAVPTLHLDSMQGTEEPPSCFISYCNSDTSVHRYKFPDDHALLRQWCTCLKLNNVTSFRGKYVCANHLPVIPTHCAICGTNDLELPLQIFPGNRAVRKKWCHNLKLPVINKWNFNHTLCSKHFEERCYTMASGEKILRTDAVPTLHLNNSDSNIFQNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00339186; iTF_00339187;
- 90% Identity
- iTF_00339186;
- 80% Identity
- -