Cpro007600.1
Basic Information
- Insect
- Chymomyza procnemis
- Gene Symbol
- fru
- Assembly
- GCA_035046065.1
- Location
- JAWNOJ010000021.1:27789102-27794097[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.024 35 4.2 0.0 11 41 520 550 518 553 0.77 2 2 2.7e-08 4e-05 23.2 0.1 9 39 1092 1122 1088 1123 0.93
Sequence Information
- Coding Sequence
- ATGCTGTTCACTTTACGTTGGGAGCATCATCAGAGCAATATGCAGAACATGCTctgcaaaatgcagcaaaatgaTCGCTTCTGTGATGTGACTTTGGTATGTGAGGGTAAATTTATACGCGCTCATCGCATAGTGTTGTGCTCCTACAGCACTTATTTCTATTGGATACTTTCGAATTGTAAAGATTCGGAATACCCAGTCATAAGTTTGGATAACATGCTATATGCTGAGCTTAAATATCTCATTGAGTTTATGTACAAAGGCGAAATCTATGTGGAGCGTTCCTGCTTGCCGTCGTTGTTAAAGACCGCTGATGAGCTAAAAATCAAGGGTCTGGGTGCGGCACCCGGCAGTGATGATAAAGATGGACAATTTCACTCATCGGCACATCATCTGACCATGAGCTATGTGCAGGATCACACTCAGCATTCTGCATCTACAACGGAGGGAGAACGTGAAAAGCGCACGTCGCCAGCCAAAGACATCATGCAAGTTGCACAAAACGCGCGTTTATCAGATGCGTCTTGTATATCTAGTGCTACGACCAGTGTTGAATTAGCAGCTCCTGTGGCGCAACAATTGGAAGCCAAGCGCAAACGTGCTGGATCATCACTAGTTGATGCCTGCGATGAATTCAATGTTCgcaagttggccaaaaatgcAGACAATATAGAACCAGGTTCATGTAGCCATACCGATACGGCGCGCCATTTTGTCGAGGAACTGGCAGCAACTGCGGCACATTCCGCTTCACTAGCTTTGCCAAATTCTGCTGCAGCTCTTAATCCACAGCCTATACAGCAGCCGCCACAGAATGAGTGTTTTGCTGTTGAGCAGGAgactataaaaaaagaagaccAATTGCTTACTGATATTACAGTGGAGGAACAGAATTGGTTGATGCAGttcttgcaacaacaacagccaacacAGACTGACAACATTGAGTACTGTAGCGCTGAGCAAGAGATAGCAAAGGATTTGACCAAAAACAACTTGCTGTCGAATGAGGCCGAAGTAGCGCCCATTATTGTCGATACAGCATACACGCAGCCCAAATTGGAGCAGGAGGAAGAAGAATTGCTGCCTGATATCGCACAGCAGTCCGCGCAACAACTGTTGCAGCTGCCGGTACAAGAGTCACCACAGAGTACAAACGTTGTACATTCTGTTGCTGAGCAGGAGTCTGCAATGGTGCACAACGGTTCCACAGCAGCTAATAACGAGAACGATATGCAGTTATCTAGTAGCAGTGTGCCACAGATGATTAACAGCGAGCACTTGGTGGCCAATCGTGCTGAATCACCTGTTGCTGGTCCCACAGCGCTGTTGCAAAATGAACATGGCATGCAGATGGCTGCAATAGCTGCTATGGCCAGTGCTACAAATGCTTATCAGGCGGCTGCACATGGCACACGAAATCATCGAGCAGACGAGCTGTCTCTGACCAATGAGGAATTATCGGAATGGCAGGACgttattaaaatgaatgacTATATAGCCAATGGACGGCGATTGTTGTTCTGGGAGGAGCCTACTACCAAACGCGTGCTGGATGCCATTAAGAATAAAAGACTTGAATTGAAAAAGGGGGCACGCATATTAGGCGTCTGCTATGGCACACTTTACGGGCGTTATCGTGATATGTACGGGTATCTAAAGATTCCTTATAGTCGCAATGCCTTACGCAACTTATCCGCCTCATCCGTAGCTGACCAATTAGCCGTGCAACCGCACGTTGATCTGGCCCTTCGCAGTGACAGCGTAATGCCTGGCCTGAAAATGATACATAATTTACGCTGGGAGAGTCATCAAAGCAACATGCAAAACATGTTGTGCAAAATGCAGCATAATGATCGCTTCTGTGATGTAACCTTGGCATGTGAGGGTAAATTTATACGCGCTCATCGCATAGTGTTGTGCTCCCACAGCACTTATTTCTATTGCATACTTTCGAATTGTAACGAAAACGAGTATCCCATAATCAGTTTGGataatgttttgtttggcGAGCTTAAATCGCTCATTGAGTTTATGTACAAGGGTGAAATCTATGTGGAGCGTTCCAGCTTGCCGTCGTTGTTAAAGACCGCCCAGGAGCTAAAAATCAAGGGTCTGGGTGCGGCGCCCTGCAGCGATGATAAAGATGGCTCAATGTTGCCTATTTGCTCTGGACAATTTCACTCATCGGCACGTCATCTACCCAAGAGCTATGTGCAGGATCAACCTCAGCATTCTGCATCTATACCGGAGGGAGAACACGAAAAGCGCACGTCGCCAGCCAAAGACATCATGCAAGTTGCTCAAAACGCGCGTTTATCAGATGCGTCTTGTATATCTAGTGCTACGACCAGTGTTGAATTAGCAGCTCCTGTGGCGCAACAATTGGAAGCCAAGCGCAAACGTGCTAGATCATCAATATATGATGCCTACAATGAATTCTATGTTCGCAAGTTGGTGAAAAATGCAGACAATATAGAGACTgcaaaaacggaaaaaaaatCGCTTGATATGACGGTGAAGGAATTGAATTTGTTATGCCAGTTCATGCAAGAACAACAGACATCACAGATTAACGTCTATGAGTGCCGTGATGCTGAGCAAGAGATAACAGAGGATTGTACTAAAGCCAACATACTGTCCAATGAGGCCGAAGCAGCGTCCATTATCGTCGATACAGAATGCACGCAGTACAAATTGGAGCAGGAGGAAGAACAATTGCAGCCTGATATCGCACAGCAGTCCGCGCAAGAACAGTCACCAGAGAGTACAACCGTTGCGTATTTCGACGTTGAGCAGAAGTCTGCaaagaattgcaataaaaaaatggaaatcacACAGCCCAAATTGGAGCCGTCGGAAGAAGTTGAATTGCTGTCTGAGCAAGAGCAGCAACAGTTcttgaatgatgatgatgtggtTGATATGCAGTTACCCTGTAGTGTGCCACAGCTCGCGGAGGAGATTAAACCCGAGCAGTTGGTGGCTAATCGTGCTGAATCACCTGTTGCTGATCCCGACCCGCTGTTGCAGATGTCATACGATATTGAGCACAATGTGGCAAGTGTAGCAGCTGCTGTGGTCAGCGGTACGAATGGTAATCAGGCGCATGAACATGACACAAGCGCTGCTGATATACCAATCATTAATTCTGAAACAGCCGCGCTGGGGCAGACCAATGATTCTTCATGGCAGGACGTAGTTAAATTGGATGACTATTTGTCTATAGGATGGCGCGCACAGTTCTGGAAGGAGCCCTTTATTAAGCGCGTGTTGGATGCCATTAAAAATGGATCTATAAGTATGAGAACGGCGGCAAATACATTAGGCGTCCCCTATCATACGCTGTATAAGCATTACCGCAAATCGTAA
- Protein Sequence
- MLFTLRWEHHQSNMQNMLCKMQQNDRFCDVTLVCEGKFIRAHRIVLCSYSTYFYWILSNCKDSEYPVISLDNMLYAELKYLIEFMYKGEIYVERSCLPSLLKTADELKIKGLGAAPGSDDKDGQFHSSAHHLTMSYVQDHTQHSASTTEGEREKRTSPAKDIMQVAQNARLSDASCISSATTSVELAAPVAQQLEAKRKRAGSSLVDACDEFNVRKLAKNADNIEPGSCSHTDTARHFVEELAATAAHSASLALPNSAAALNPQPIQQPPQNECFAVEQETIKKEDQLLTDITVEEQNWLMQFLQQQQPTQTDNIEYCSAEQEIAKDLTKNNLLSNEAEVAPIIVDTAYTQPKLEQEEEELLPDIAQQSAQQLLQLPVQESPQSTNVVHSVAEQESAMVHNGSTAANNENDMQLSSSSVPQMINSEHLVANRAESPVAGPTALLQNEHGMQMAAIAAMASATNAYQAAAHGTRNHRADELSLTNEELSEWQDVIKMNDYIANGRRLLFWEEPTTKRVLDAIKNKRLELKKGARILGVCYGTLYGRYRDMYGYLKIPYSRNALRNLSASSVADQLAVQPHVDLALRSDSVMPGLKMIHNLRWESHQSNMQNMLCKMQHNDRFCDVTLACEGKFIRAHRIVLCSHSTYFYCILSNCNENEYPIISLDNVLFGELKSLIEFMYKGEIYVERSSLPSLLKTAQELKIKGLGAAPCSDDKDGSMLPICSGQFHSSARHLPKSYVQDQPQHSASIPEGEHEKRTSPAKDIMQVAQNARLSDASCISSATTSVELAAPVAQQLEAKRKRARSSIYDAYNEFYVRKLVKNADNIETAKTEKKSLDMTVKELNLLCQFMQEQQTSQINVYECRDAEQEITEDCTKANILSNEAEAASIIVDTECTQYKLEQEEEQLQPDIAQQSAQEQSPESTTVAYFDVEQKSAKNCNKKMEITQPKLEPSEEVELLSEQEQQQFLNDDDVVDMQLPCSVPQLAEEIKPEQLVANRAESPVADPDPLLQMSYDIEHNVASVAAAVVSGTNGNQAHEHDTSAADIPIINSETAALGQTNDSSWQDVVKLDDYLSIGWRAQFWKEPFIKRVLDAIKNGSISMRTAANTLGVPYHTLYKHYRKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00339219;
- 90% Identity
- iTF_00339219;
- 80% Identity
- iTF_00339219;