Cpro012534.1
Basic Information
- Insect
- Chymomyza procnemis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035046065.1
- Location
- JAWNOJ010000026.1:5280294-5301936[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.8e-12 1.5e-08 34.2 0.0 1 35 331 366 331 373 0.92 2 3 1.1e-18 1.7e-15 56.5 0.0 1 43 785 828 785 830 0.95 3 3 0.0012 1.7 8.4 0.1 16 30 943 957 937 958 0.90
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAGCACTATCAAGAACAATTGAAGCGTACCCAATTGAATATTGCAACAATCATAGCAGATACAGAAGCAACAGACAACAAATAcgacgacagcaacaacaaacactgcaaacagcaacaacaagaagtcGAAGAATTACAAGACCACCgtttaatacaacaaaaggAGCCAATAGACAACTGGAAACTTTGGAGCAACAACGCCTTGGAATTTCCAACAGATTTTGACAACAACCATAGCACATCACTAACTGATCCAACATCACGTACACCATCACCACCGCCTGAACCCAACGATTGGACACCGTCTGATAAGTGTAATTTCTGTGTTAACGGTCGCTTGCTCACGGTCAATGCCCAAGGTGAATTAGTGGccgaaacaacaactacaacaacagcagcagccacttCATACAACAACTATTGCCACAACGGTGCCACACAAATAGTGCATCAGCTGGACAGTGATAGCAATTCAAGCGCATCGCTGCACAATTTTGACAGCAATAACCACAGCACTAAGCCCACTGTGCGTACAGTGAAACGCAATATAACGGCCCACAGTAATAGCAGCGCAGTCGGTACCTCTGCGTCGCCATCGGCGGCATCATCTTCTATAGAACTCTATAAGTTGCTTACACAAAAAGCGCCTACAATGACATCCATGAACTCGATGGCCGCACATTTAGCTGCAATACAGGAACTTCAAACTAATTTTATGAGTACGCTGGCCAATCatcagaaacaacaacaacagcaacaacagcataCTACATCGGTAACACCAACTACCTCAGAAGTATCTGGCGCCGCAATAAGTCCAACACTCAAAGATACGCCCAGTCCGAGTGCAGATGCACCTTTAGATCTTAGTTCCAAACCATCACCAAATTCATCGATTAGCGGTGATCTTAAATCTGGCAGGACAATATCGGAGTGCGCTACGCCAATACCTGCAGCACTGCGTAGCTACAGCGAGGATGATCTGCAAAGTGCTCTACAGGTTGTGCTGGACCACAAGATGGGTACACGCAAAGCGGCCAGCCAATACAATGTGCCGCGCTCTACGTTGCGCAACAAGCTGCATAAGATACAGGCCAAACGCGGTATTGAGCCGTCAAATGATCTGGATGTGGATCAGGATGACTCAGCGGATGAATATGACGATAGCATATTCAGCAATGCCTCAACGCCAGTGTACTCCGAGTTAGCGCAGATGCGCAAGTTGCGCAAGCTTAGCGGTCTATCCGAGAACAATGGCAGCGAACTGGGCGACGACCTTGAGCCGAGACAGGGTGGCACATCACCTGGGCAGCGCACAGATAGCGGCACACCCGTAGGTTGTAGCGCTGCCAGTACCGGTGGTAGTGCTGCCATCGATCCCAATGTGCTGCTGCGCACACTTATGCTGGCCAACGTCATGCCCAAGCTAGACGAGAATCAGACAATAGGTGAATTCCTTAGAACGATGGCGCTGGCCAGTAGGAGCAATTCCTTTCTCAATGGCACGTTTGCCAATGCAGTTAGCATGACCACACCCGAGACaaatttgctacaaaatgGCACGGGCACTGCCATCTTTGATCAGCATctgttgctgcaacaattgcagcagcagcaccagcagcagcaacagcaatcccaacagcagcagcagctgggcGTCAACAGCTATAGGCATCGCTTACCAAAGTCTGATACACCGGAGACCAACTCCTCGCTGGACACAAACGAGGCCTGTGATGATCCCATACTGAAGATTCCGTCCTTCAAGCTTAGCGGCGCCTCAAGTGTTTCACCCTCGCTCTCGAGCTGcctcaacaacaataacaatactACCAACAGCAACTGCATCAGCAATCGCAATGGCGGCGTCGGCGAGCAGCGGCCTCATTCCCTATCGCCCATGCTATCGTCTGCAGTGGGTGCAAACACTTTTCGACAACTCAACTCTCCGCCTACGGACATACAAAAAATGATGGTCAACTCCATACATCGCAAGATTAATGAGCAGCAGAGCAGTCAGGAGGCAGCTATGTTAGGACTCGGCCTGGATGCCTGCAACAAGCGCAATAATGGCAATACCAGCGGCAGcgagtgcagcagcagcggcctGAATGTcaacagcagcggcggcagctaCAAAAAGCCGAGCATAAGCGTGGCAAAGGTAGTGGGCGGCACGGATACCTCACGTTTTGGTGCCTCACCCAATTTGCTGGCACAACAGCACCATCTGCCCACGCATCATGCACATCAGCTGAGCGCGCAAGATGCAGCCGCGCTGGCCGCCGGCAAGGGCACACGCCCCAAGCGCGGCAAGTATCGCAACTACGATCGAGATAGTCTGGTCGAGGCGGTCAAGGCGGTACAGCGCGGCGAGATGAGCGTACATCGTGCGGGCAGCTATTACGGCGTGCCGCATTCCACGCTCGAGTACAAAGTCAAGGAACGGCATTTGATGCGTCCGCGTAAGCGTGAACCCAAGCCACAGCCGGATTTGGTTGGTCTGACGGGCGCAGCCAATAAAATCAATCCCGCCAATCTGGTAGCCAACAATCACTTGGACAAGCTTAaggccagcagcagcggtgCCAATTCCAAACTTAGCAATGCGCTTAAAAACAATAGTCAAGCCATGGGCGTAGTGGGCGCTGCCGGAGTGCCGCCCAATGGCATTACGCTGCCAATATTCGAGGCACCCGGACAGCGTCCTTTTCAGCAAGGCATGTTCTGGTCACCGACTAGCCTGCTAGATGCCATGCGCCTAAACGCGGGCAGTTCAAATGCCATGGCCACTGCCAGCGCACAGCTGAGTCAGCAGCATGCTGCACATGGACATGGTATACCGCACAAGGGCGCGCTGGAGTTCCAGGAAAGTGTCTACGATAATATTATACGCAAAAAGCTGCAGAGCAATGAGGGCACTGGCAATCCGCTGCTGGATCAGCTGCTGGTCAATAACAATCCGGTGCCGTTCACCAATAATCGCGCCAATGAGTATGCAGCAGCATCCACCTGCTCCACGGCCGGCAGCGAGGCAGCCAAACGTTTGGGCACACCCATGGAAGCCTATGCGGATGTTAAACGTGAACGTTTAAGTCCCGAGTGCGGTACcgctggcagcagcagcagcagcggcgatGAGGAGCATCTGacgagcagcaacaacaacaacaacagcaataacaataacaacagtgAGACGgcgcacaacaaaaacaagagcagcagcggcaacaataAGTGCAAAAATGGCAATAGCAACAACGGACGCAGTCGCATGACGTCACGCGACTCGGAAACCGATGCTAGCAGCTTTAAGAGCGAACACTCCGAGCTCAGTCTGGCTGCTgtgcaaaataacaaaatgatgGATCtcaatggcagcagcagcaaacatcAGGCAACTGAGGCTAGTGCTATGGATGCCACCGCCAGCTCATCCATATTGCATGAGAAGCTGGCGCAGATCAAGGCCGAGCAGGAATGCCCAAATGTCAGCGAGGAGCACTTATAG
- Protein Sequence
- MGRRKWKHYQEQLKRTQLNIATIIADTEATDNKYDDSNNKHCKQQQQEVEELQDHRLIQQKEPIDNWKLWSNNALEFPTDFDNNHSTSLTDPTSRTPSPPPEPNDWTPSDKCNFCVNGRLLTVNAQGELVAETTTTTTAAATSYNNYCHNGATQIVHQLDSDSNSSASLHNFDSNNHSTKPTVRTVKRNITAHSNSSAVGTSASPSAASSSIELYKLLTQKAPTMTSMNSMAAHLAAIQELQTNFMSTLANHQKQQQQQQQHTTSVTPTTSEVSGAAISPTLKDTPSPSADAPLDLSSKPSPNSSISGDLKSGRTISECATPIPAALRSYSEDDLQSALQVVLDHKMGTRKAASQYNVPRSTLRNKLHKIQAKRGIEPSNDLDVDQDDSADEYDDSIFSNASTPVYSELAQMRKLRKLSGLSENNGSELGDDLEPRQGGTSPGQRTDSGTPVGCSAASTGGSAAIDPNVLLRTLMLANVMPKLDENQTIGEFLRTMALASRSNSFLNGTFANAVSMTTPETNLLQNGTGTAIFDQHLLLQQLQQQHQQQQQQSQQQQQLGVNSYRHRLPKSDTPETNSSLDTNEACDDPILKIPSFKLSGASSVSPSLSSCLNNNNNTTNSNCISNRNGGVGEQRPHSLSPMLSSAVGANTFRQLNSPPTDIQKMMVNSIHRKINEQQSSQEAAMLGLGLDACNKRNNGNTSGSECSSSGLNVNSSGGSYKKPSISVAKVVGGTDTSRFGASPNLLAQQHHLPTHHAHQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKINPANLVANNHLDKLKASSSGANSKLSNALKNNSQAMGVVGAAGVPPNGITLPIFEAPGQRPFQQGMFWSPTSLLDAMRLNAGSSNAMATASAQLSQQHAAHGHGIPHKGALEFQESVYDNIIRKKLQSNEGTGNPLLDQLLVNNNPVPFTNNRANEYAAASTCSTAGSEAAKRLGTPMEAYADVKRERLSPECGTAGSSSSSGDEEHLTSSNNNNNSNNNNNSETAHNKNKSSSGNNKCKNGNSNNGRSRMTSRDSETDASSFKSEHSELSLAAVQNNKMMDLNGSSSKHQATEASAMDATASSSILHEKLAQIKAEQECPNVSEEHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -