Cpro006646.1
Basic Information
- Insect
- Chymomyza procnemis
- Gene Symbol
- ct
- Assembly
- GCA_035046065.1
- Location
- JAWNOJ010000021.1:12165316-12222476[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.8e-27 6.1e-23 80.6 0.0 3 72 1128 1198 1126 1203 0.95 2 3 6.8e-32 6.1e-28 96.7 0.0 3 77 1597 1672 1595 1674 0.96 3 3 4.2e-31 3.7e-27 94.1 0.0 3 76 1862 1936 1860 1939 0.96
Sequence Information
- Coding Sequence
- ATGAGCTGCACACgacttttaattCGCGCTACACTAGCCGAGAAGGAAGTGAATACTTTAAAGGAGCAACTCTCCACGAACACGCCCAGCAGTAAtagcagcaacgacaacaacaacacagccgcagtggcagcaacaacaacagcaagcatTGAGTGCTTGGAAGACACagtagcggcagcagcagcagcaggagagAGTACAGTCAACGAAAGCGAGAGCGAGCGTAAATTGCTTAATAGCGTTGCAGCCGCCATAACGTTGCACCAGAACGGCGGTAATCTGCTTGCAACAAATACACCCTCACCATCGCCGCCATTGCTTAGCgccgagcagcagcagcaattgcagAACGAGGTGAGCGTTAACGGTGCCGCTGCGGCCTGCCTTAATCCAAAGCTCTTCTTCAATCACGCACAACAAATGATGATGGAagcggcggctgctgctgctgcggcagctgcagctgcagcggctgcacaacaacaacaacaatcgccCATGCATTCGCCAACAGTTGGCGCTGCTGTGCAGTCTGCAACAACCGTAGTTGCTGGCAGCACAGTGAGCAacacacaacagcagcaaaatagTAGCCAAAATGTTGTAGAgccagcaactacaacaaatagcaacagtagcaataataacaacaacaacaacaacagcaacaacaatcagcACAACATTAGCAACAATGTGGCTGAAGATGATGAAGAAGATGATGAGGAAGATGTATCGATGCAATCGAATATGGCGCATGCCGATAACgacgaagatgatgatgaagaatTGCTCGATGAGCAGCAGGCTGTGCAGCATGACGATGATGtggatgacgatgatgatgatgacgatgatgatgcggatgaagatgatgatgttgttgcaAATGAAGCTGGCAAAAATACAGCTGCCGCCGTAACAGCAAATACTCAGCTTAGAATCAGAACTGATAGCATAACTGAGCAGGAGCAGCTTAATGCGCAGCAAGCCATGGATATGGAGCACACAGAGCAGCTGCACGATGCAGCGGCGGTCAATGCCGATGCATTAGCAATAATCAATAATCATAATACGGATAGCAATAATAGTTGTAGTCGaaagaacaacagcaacagcaagcaTGTGCCGCAACATGTTGCACTGCgtgataataatgataatgagcAACATGTGGCAAGTGCCGAGGATGATGATTGCACCAATAACAatactaacaacaacaacaacaacaataataatacggAAAAGCGCAAGAAGCGCaataccagcaacaacaataataacaacaatcaaGCTGTTCTTTTAGCTGCCAAAGATAAAGAGATTAAAACACTTTTGGAGGAGTTGCAACGCCTGCGTGCCGCAGAACAAACTCATCTCATACACATCCAACGCCTCGAGAAGCACATAGAGGTTAAGCGTCAGCACATTATGCGTCTCGAAGCGCGTCTGgataagcaacaaataaatgagGCATTGGCCGAGGCAACTGCCTTGGCGGCCACCACTGTTGCGGCTGctacaaataacaacaacaactgcagcaataacaacgataacaacaaTGTTGTCGATATCACACATGAGGCTATCAATGATTTGGCAGTTGTAACCAAATTAGCTGAACGATTGCCCGCCACAGATGAGCAGCATAGCACCAATGAGGAGGAGGATGCAGCCGATGAGGAGAACGAGGAGACAGAGCAGCTGTCCGCCGCCTCTGCCGATATGTTGCATGCCAATAGCACAATGGAAACTGACgagttgaaaatcaaaaaggaGCAACACAGTCCATTGGATCTGAATGTGCTCAGTCCACAGTCGGCCATAGCCGCtgcagcggctgctgctgcagctgccgcCTGCGCCAATGATCCAAACAAATTCCAGGCTTTGCTGATAGAACGCACCAAGGCTTTGGCCGCTGAGGCGCTTAAAAATGGAGCCAGTGAAACAACGGCCAAGGAAATGCCGCAAGCAACAGCAGACGCAGCTGAAGATGATGGCAACaccgcagcaacagcaacccTAACAGCTGATCCAAAAGCTCACGAAACAGCTGCTGGCGCAACGCATGATAATGAAACAGCCAAAGCAGCAGCTGATAAGCAATCGTTTTTAAACACACCAGCTAGCAGTAGCCCATTGCCAAATATGCcaacaaaaatcgaaatccCAGATGAAgacgatgaagatgatgatgagctAGCCGAAACGGCTGAGCATGCAAAGCGGCTAACGCTCGAAGAGCAGCTGGTCAATAGCTATTGGCGACGCGGCTTTGAAGCCAATGCAGCGACAGCAGCGAGCAAAACGCcaacaatttatcaaaatgccaatttgccacagcaacaacaacaacaacaacaacaacagccagcCATACAGCTGctgccaccaccaccgccgccgccaccgccacccGCAATGAGCCACTATGCCgctcagcaacaacaacatcaacaacaacaacaacactatcaacaacagcaacatggACCATCGTCCACAGCGCTGCTTAGTCAATTGGTTAACTCAACTTTTTCACacgcttcttcttcttctactCCCTGCTCCTCCACATCCAACACTGCCGCTGTCAACAACACTTGTTCCAATACCAAAATTCCTTTACCGCTGCGCGCAGATGGCAGCAATGCACTGCATCAGCCGCATCAACAGcagccagcaacagcaacactgCCGCCGCATCTACACGCGCAGCAACAGCCACATCTGCCacatcaacaacagcagaaTCACAGCAACTCCAGCCAGTCCAATGCCGATTTGGAGCACAAACCTGCCGCCGGCGCGTTGGCACTAAATCATCAccagcatcagcatcatcatggACATGGTCTGGGCAGTCATCATGCACATCATTTGCATGATGGCTCGAATAGCTCTAGCGCCAATAGCACACCCAATCCGTCTGCCGGTGGCGCTGCCGCTGCGCAGCTGGCAGCCAGCATTGCCTCACAGCTAAATGGCAGCAAATCGTTGCTGcaagcagctgctgccgctaATGCAGCAGCCAATGCCGTGGCCGAGGATAACAACAATAGCCTAACGCCCAATGCAAAtgccgcagctgctgcagccgctATGGCTGCACATGCGCAGCATGCACATGCCGCTGCAGCACTGGGTGCGCCCGGTTTCTTGCCGGGACTGCCAGCGTTCCAATTTGCcgccgctgcagctgctggtCAGGAACAGCGTGGTCATTATCGTTTTGCCGATGCCGAGCTGCAGCTACCACCGGGCGCTTCAATGGCCGGACGTTTAGGTGAATCGCTCATACCCAAAGGCGATCCCATGGAGGCCAAGCTGCAGGAAATGTTACGCTACAATATGGACAAATATGCCAATCAGGCGCTGGATACGCTGCATATATCGCGACGTGTGCGTGAGCTGCTATCCGTGCATAACATTGGACAGCGTCTGTTTGCCAAGTACATACTGGGCCTGTCGCAGGGCACCGTCTCGGAGCTGCTTAGCAAGCCCAAGCCCTGGGATAAGCTCACCGAGAAGGGACGTGACAGCTATCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCGGTTATGCTGCTAAAGTCGCTAATACCCAAGAAAGACTCTGGCCTGCCACAGTATGCTGGACGCGGTGGTGGCGATGATTCCATGTCTGAGGATCGCATTGCGCATATACTGAGCGAGGCCTCGTCACTGATGAAGAGCAATGCTGTGCAGGAGCAGCAGCGACGCGCCTCTGCGCATGGCGATGATACGCATAGCAATGAGGATAGCAAGTCGCCGCCACAGACCTGTACATCGCCGTTCTTTAAGGTGGAACAGCTGAAGCAGGAGCATGCACAGCGTGAGCAGCAGCGTGAGCAACGTGAGGCTGTtgcacagcaacagcagcgggagcagcaacaacgtgAGCAGcgtgagcagcagcagcgtttgCGTCATGAGGACTTGGCACAGGATAAGATGGCGCGTCTGTATCAAGAGATAATGGCGCGTACGCCCAGAGAGGCTGCTTTTCCTAGCTTTCTGCTGTCACCATTCTTTGGTGGCGCCGCCGGCATGCCCAGTGCCGCCAATGCATTCCCCGCCGCCATGGCCGCCGATGAGAATATGCGTCATGCTTTCGAGCGTGAAATTGccaagctgcagcagcagcagcaacagcagcagcaacaacatcaggCTGCCAGTTTTCCAAATTTCTCCAGCCTTATGGCACTGCAGCAGCAGGTGCTCAATGGTGCACAGGATCTCTCGCTAGCCAGCGGTAAAGACATGCTCAAGGATATCAAGGTGAATGGCCAACGCGGTTCACTTGATCATTCGCAGAGCTCCAAGGATGGCGAACGCGATGATGAACGCAGTCTAGACCGTGAACGTCATAGTGCTGGCGGCACAGCTGCACCAGGTAGCAATCGCAGCAGCTCCGGTTTTGGTTTGCATGGCTGCAAATCCGAAAGTGGCGCTAGCGTTGGTACAGCTGGTGGTGGCACACCTGCACCACCCGCACCGCCCAGCAGCAATGCCTCGGCACAGCATACTAGCAATTCGGCAGCGCCCAGTCCATTGAGTAACTCCATATTGCCGCCGGCTTTAAGCCAGGGTGATGAATTTGCAGCGACCGCGAGTCCTCTGCAGCGCATGGCTTCCATAACAAACTCTTTAATCACACAACCACCAGTGACGCCACATCATTCGACGCCACAGCGGCCCACCAAGGCGGTGCTGCCGCCCATTACACAGCAGCAGTTCGATATGTTCAATAATCTCAATACCGAGGATATTGTGCGTCGCGTCAAGGAAGCACTGTCCCAGTATAGCATTTCGCAGCGTCTATTTGGTGAATCAGTGCTGGGTCTATCGCAGGGCTCGGTATCCGATTTGCTGGCAAGACCCAAGCCTTGGCATATGCTCACCCAAAAGGGACGTGAGCCCTTTATACGCATGAAGATGTTCCTGGAGGATGAGAATGCCGTGCACAAGCTGGTGGCCAGCCAGTATAAGATTGCACCCGAGAAACTTATGCGCACGGGCAGCTACAGCGGCAGTCCGCAAATACCGCAGGGATTGGCGAACAAAATGCAAGCGGCTCTGCCCATGCAAAAGATGATGAATGAACTGAAGCTACAGGAGCCTGCACAGGCACAACACattatgcaacaaatgcaGGCAGCAGCTGCCATGTCTGCGGccatgcaacagcaacaagctgccgccgctgctgcacAGCAGCAAAGCCAACATCAGCAACATGCCGCAGCACAAGCggctgccgctgcagcagcagctggacTGCATCatcaaaatatgctgcttacCTCGCCGGGCTTGCCACCACAGCATGCTATAAGCTTGCCAGCAGCCACGGGCAGTGGCAATGGAAGTGGCGGCGTGGGTGCTGCTGGTACGCCTGTGACGCCAGTCAGTGGTTCAGCCATTGCCGGCCCCGACAAGAAGCCCATGATGATGCCCGTGCATGGCGCGCATGCACCCAATGCCATGCGCAGCTTGCACCAGCACATGTCGCCCACCGTCTATGAGATGGCTGCGCTGACGCAGGATTTGGATACACACGACATTACCACCAAGATCAAGGAGGCGCTGCTGGCCAACAACATAGGCCAGAAGATATTCGGCGAGGCTGTGTTGGGTCTGTCGCAGGGCTCCGTCTCTGAGCTGCTGAGCAAGCCCAAGCCCTGGCATATGCTTTCAATCAAGGGACGCGAACCCTTTATACGTATGCAGCTCTGGCTGAGTGATGCCAATAACGTGGAGCGTCTGCAAGTGATTAAGAACGAACGCCGCGAGGCCAGCAAGCGACGTCGCTCAACGGGACCCAATCAGCAGGATAACAGCTCAGATACCTCCAGCAACGATACCAACGACTTCTACACCAGCAGTCCGGGACCTGGTTCAGTGGGCTCCTCGGTCGGTGGTGCACCACCCAATAAGAAACAGCGTGTGCTCTTCTCTGAGGAGCAAAAAGAAGCATTGCGTCTTGCCTTTGCCTTGGATCCCTATCCCAATGTGGGCACCATTGAGTTTTTAGCCAACGAGTTGGGTTTGGCTACACGCACCATAACCAACTGGTTTCACAATCATCGCATGCGCTTAAAGCAGCAGGTGCCGCATGGTCAGCCCGGCATTGATAATCCCATACCAAGCCGCGAGAATACCAATGCCACACCCTTTGATCCCGTCCAGTTTCGCATATTGTTGCAGCAGCGCTTAGTCGAGCTGCACAAGGAACGCATGGGCCTAAGCGGTGCGCCGCTACCTTACCCACCTTACTTTGCAGCCGCCGCGCTGCTGGGACGCAGTTTGGCAGGCATGCCTGGCGCCGCTGCGGCCGCGggtgctgcggctgctgctgcggcagctGCTGCCGGCGCCGCAGGCGAGAACGAGCTGCAGGCATTGAATCAGGCTTTCAAAGAGCAAATGAGCGGTCTGGATTTGTCCATGTCTACGCTTAAGCGTGAGCGCACCGATGACTATCAAGATGAGCTGGACATGGATGCCAGCGCGCAGCATATGAGCGACAATGAGTCGCTGGATGATGACAAAACTGCTAATCTAAGCTCGGACTATGAGAAGGCTATGCAAAAATCCGCGCTAGCCTCAGCTGCTGCGTACATGAGCAATGCCGTGCGCAGCTCACGTCGCAAGCCCGCAGCGCCGCAATGGGTCAATCCTGCAGGCGCAGGCACGCCCAGTGGCGCAGCAGCCGTAGCtgtagctgcagcagcagcagcagctgcagccgcTGCCGCAGACAGTGAGCGCATTATCAATGGTGTCTGTGTGATGCAGCCATCCGATTATGGACGTGATGAGGCGGAGGGTAAGTCCACGGGTGCCGGCAGCGAGGCGGCCAATAGCGAAAGCGGTGAGCATGAGCATGCGCATCTAGAAATGGATCAAAGCTTCATGGAGCCAGAGGTGCATATTAAACAGGAAGAAGACGACGAGGAGGAGGATTTGAACAATGAATGTGGCGCCAATGATGCAGCCACGGCTGAAGAGAAAAAACTCAAGGTGATTAACGAGGAGAAGCTGCGCATGGTGCGTGTGCGACGTCTGAGCAGCAATGGAGCCGCCGCCAATGCAGCCGAACTGGAGGAGAGCTGTGCGCCTGCGCAACAGCAAACGGCAAGCGCAGTGCCTGCAGCCGCTGCGGCCTGGAACTACTAA
- Protein Sequence
- MSCTRLLIRATLAEKEVNTLKEQLSTNTPSSNSSNDNNNTAAVAATTTASIECLEDTVAAAAAAGESTVNESESERKLLNSVAAAITLHQNGGNLLATNTPSPSPPLLSAEQQQQLQNEVSVNGAAAACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAQQQQQSPMHSPTVGAAVQSATTVVAGSTVSNTQQQQNSSQNVVEPATTTNSNSSNNNNNNNNSNNNQHNISNNVAEDDEEDDEEDVSMQSNMAHADNDEDDDEELLDEQQAVQHDDDVDDDDDDDDDDADEDDDVVANEAGKNTAAAVTANTQLRIRTDSITEQEQLNAQQAMDMEHTEQLHDAAAVNADALAIINNHNTDSNNSCSRKNNSNSKHVPQHVALRDNNDNEQHVASAEDDDCTNNNTNNNNNNNNNTEKRKKRNTSNNNNNNNQAVLLAAKDKEIKTLLEELQRLRAAEQTHLIHIQRLEKHIEVKRQHIMRLEARLDKQQINEALAEATALAATTVAAATNNNNNCSNNNDNNNVVDITHEAINDLAVVTKLAERLPATDEQHSTNEEEDAADEENEETEQLSAASADMLHANSTMETDELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLIERTKALAAEALKNGASETTAKEMPQATADAAEDDGNTAATATLTADPKAHETAAGATHDNETAKAAADKQSFLNTPASSSPLPNMPTKIEIPDEDDEDDDELAETAEHAKRLTLEEQLVNSYWRRGFEANAATAASKTPTIYQNANLPQQQQQQQQQQPAIQLLPPPPPPPPPPAMSHYAAQQQQHQQQQQHYQQQQHGPSSTALLSQLVNSTFSHASSSSTPCSSTSNTAAVNNTCSNTKIPLPLRADGSNALHQPHQQQPATATLPPHLHAQQQPHLPHQQQQNHSNSSQSNADLEHKPAAGALALNHHQHQHHHGHGLGSHHAHHLHDGSNSSSANSTPNPSAGGAAAAQLAASIASQLNGSKSLLQAAAAANAAANAVAEDNNNSLTPNANAAAAAAAMAAHAQHAHAAAALGAPGFLPGLPAFQFAAAAAAGQEQRGHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGGGDDSMSEDRIAHILSEASSLMKSNAVQEQQRRASAHGDDTHSNEDSKSPPQTCTSPFFKVEQLKQEHAQREQQREQREAVAQQQQREQQQREQREQQQRLRHEDLAQDKMARLYQEIMARTPREAAFPSFLLSPFFGGAAGMPSAANAFPAAMAADENMRHAFEREIAKLQQQQQQQQQQHQAASFPNFSSLMALQQQVLNGAQDLSLASGKDMLKDIKVNGQRGSLDHSQSSKDGERDDERSLDRERHSAGGTAAPGSNRSSSGFGLHGCKSESGASVGTAGGGTPAPPAPPSSNASAQHTSNSAAPSPLSNSILPPALSQGDEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMQAALPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAAAQQQSQHQQHAAAQAAAAAAAAGLHHQNMLLTSPGLPPQHAISLPAATGSGNGSGGVGAAGTPVTPVSGSAIAGPDKKPMMMPVHGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVIKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGIDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPLPYPPYFAAAALLGRSLAGMPGAAAAAGAAAAAAAAAAGAAGENELQALNQAFKEQMSGLDLSMSTLKRERTDDYQDELDMDASAQHMSDNESLDDDKTANLSSDYEKAMQKSALASAAAYMSNAVRSSRRKPAAPQWVNPAGAGTPSGAAAVAVAAAAAAAAAAAADSERIINGVCVMQPSDYGRDEAEGKSTGAGSEAANSESGEHEHAHLEMDQSFMEPEVHIKQEEDDEEEDLNNECGANDAATAEEKKLKVINEEKLRMVRVRRLSSNGAAANAAELEESCAPAQQQTASAVPAAAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338226;
- 90% Identity
- iTF_00338226;
- 80% Identity
- iTF_00339038;