Cpro009083.3
Basic Information
- Insect
- Chymomyza procnemis
- Gene Symbol
- kn
- Assembly
- GCA_035046065.1
- Location
- JAWNOJ010000023.1:8946632-8948635[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-119 9e-116 387.5 0.0 205 384 1 209 1 213 0.99 2 2 1.1e-07 0.0004 18.8 14.3 422 519 214 310 209 323 0.64
Sequence Information
- Coding Sequence
- ATGCGCAGATTTCAGGTGGTGATATCCACGCAAGTGGCCGTCGATGGACCTCTGCTGGCCATCTCGGATAACATGTTCGTGCACAATAATTCCAAACATGGACGCCGCGCCAAACGTCTGGATACAACGGAAGGTACAGGCAACACATCCCTGTCCTTATCCGGTCACCCCCTTGCGCCCGACAGTACCTACGATGGTCTTTACCCACCGCTGCCTGTGGCGACGCCCTGCATTAAGGCCATCTCGCCCAGCGAAGGTTGGACCACGGGAGGTGCCACAGTCATAATTGTGGGCGATAACTTCTTTGATGGTCTGCAAGTTGTCTTTGGCACCATGCTGGTTTGGAGCGAGCTAATCACATCACATGCGATACGTGTGCAGACACCGCCTAGACACATACCCGGCGTCGTTGAGGTTACGCTCTCCTACAAGAGCAAGCAATTCTGCAAGGGTTCTCCCGGCCGCTTTGTCTATGTCTCAGCACTGAACGAACCCACAATCGACTATGGTTTTCAGCGCCTGCAAAAGCTTATACCACGTCATCCTGGCGATCCggaaaaactgcaaaaggAAATCATTTTAAAGCGCGCTGCCGACTTGGTTGAGGCGCTCTACTCCATGCCCAGCAGATCACCCGGCGGTTCCACCGGTTTCAACTCATATGCCGGCCAGCTAGCAGTTAGCGTGCAAGACGGCACTGGTCAGTGGACGGAGGACGACTATCAGCGTGCGCAATCCAGCAGCGTCAGTCCGCGTGGCGGCTATTGCAGCAGTGCCTCAACGCCACATAGTTCAGGTGGTTCATATGGCGCCACAGCATCTACCGCTGTAGCAGCCACAGCGAATGGTTATGCGCCCACACCTAATATGGGCACGCTGTCATCCTCGCCGGGCAGTGTCTTTAACTCCACATCAATGTCCGTATCCTCGACGTGGCATCAGGCGCTTGTCCAGCATCATCATGTCGCACACCCGCATCACTACCCGCATCCGCACCAGCCGTGGCATAATCCAGCCGCTACAGCAGCAACCGCAGCCGTATAG
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSLSGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATASTAVAATANGYAPTPNMGTLSSSPGSVFNSTSMSVSSTWHQALVQHHHVAHPHHYPHPHQPWHNPAATAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00530692;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_00338879;