Basic Information

Insect: Chymomyza fuscimana
Gene Symbol: wek
Assembly: GCA_949987675.1
Location: OX465088.1:108402115-108403970[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00045 0.047 14.7 0.5 1 23 237 260 237 260 0.95

2 8 0.0019 0.2 12.7 2.2 2 23 271 293 270 293 0.97

3 8 4.7e-06 0.00049 20.9 2.4 3 23 304 325 302 325 0.90

4 8 5.7e-05 0.006 17.5 0.3 1 23 331 353 331 353 0.97

5 8 8.9e-05 0.0093 16.9 2.6 1 23 359 381 359 381 0.97

6 8 0.00052 0.054 14.5 0.5 1 23 386 408 386 408 0.98

7 8 2e-05 0.0021 18.9 0.2 1 23 414 436 414 436 0.97

8 8 0.0032 0.33 12.0 5.5 1 23 442 465 442 465 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00045	0.047	14.7	0.5	1	23	237	260	237	260	0.95
2	8	0.0019	0.2	12.7	2.2	2	23	271	293	270	293	0.97
3	8	4.7e-06	0.00049	20.9	2.4	3	23	304	325	302	325	0.90
4	8	5.7e-05	0.006	17.5	0.3	1	23	331	353	331	353	0.97
5	8	8.9e-05	0.0093	16.9	2.6	1	23	359	381	359	381	0.97
6	8	0.00052	0.054	14.5	0.5	1	23	386	408	386	408	0.98
7	8	2e-05	0.0021	18.9	0.2	1	23	414	436	414	436	0.97
8	8	0.0032	0.33	12.0	5.5	1	23	442	465	442	465	0.98

Sequence Information

Coding Sequence: ATGAAAGCTGACGCGGTTGGAGCAAGAGAAGAAGATATGCCAGACTGGCATCAATGGTGTCGCCTTTGCGCCAAAGAGCACCCTGACAACATAAATGTCTACTTAAGAGATGGCGAAATGGCGTGGAGTAGTATGCTAGCCGTGGCTATTGGTAAATACTTTTGGGTCAATATAAAAATGGTCGACGAACTAAGCAGTGTTTTGTGTCGGGAATGTCATGAGCTGGTGGATGAGCTAATAACCTTTTCAGAACGCGTTAACCGAGTTCAGACACTTTTTGCCACGTTACAGCagggaaaaacaaaatttgcaaacgATTGCCTAGAGCTACGCAGTCGGTATGGCTTAGACACGGACGACTGGAAGCACATTATTTCTAGGCCTATTAAAGAGGAAAGCGTAAAGTCGAACTTGGCTGTGGATCAGTACATAGAAGAGGTTACCGAACATTATGATACAGATGTCGAAATACTTGCCGAAATCGAGGGGGAAGACATGATAGACGGCGACGGTAGCTATGAAACTTATTCGGTGCATGAAGCTGAGACAGAAACCCCTGAAGTAGCAGCGGCGCATCTAGAGCCCAAAAATGATGAAATTGTGGAAGAGACAGATGAAGCGCTAGAAGCCGAGGAATATGCATATGAAACTGTTGCCACTTATGAAAATGCCGAAGTGGAGGAAGACCATGAAGATACACAGAAACAATACAAATGTGATGTGTGTATGAAAATCTATAAACGTCCTATGGCCTATAAGCGACATATGATCGAATCGCATAACATAGAACCAACAAACCTACCAGTTGTCGAATGCAAGCAATGCCAGCTTTGCTTTCTAACAGAAAGTCAACTGACTGTTCATTTAAAGACAACTCATCTGCATGCGAAAGAGAAACGGGAGAGTCACTGCAACTACTGTGGCAGGTGCTTTACCACACAGGCCGCGCTCAAACGCCACGTAGCAGGCATGCACGATAATCTTAAGCCTTTTATGTGCGATACATGTGGGAAGGTCTTGAAAACGAATACTGCGCTTACGGAGCACAAATTGGTGCATACGGATGAGTGTCCTTTTGAATGCCAGGTGTGTCATCGTCGTTTTAAGAACAAGGCGCGCCTTAAGATACATGCCGATACACACAACAGTAGTAACTACGAGTGCAGCATTTGCGGTTTGAAGTTAAATACTCGACGTACTCTTAACATGCACAAATTGGTGCATTCCGATGAAAAACAGTATAAGTGCGATATTTGTGGTGCAGCATTTAAGCGCGGCAAAACACTTAAGTCGCATTTAATACTTCATACCGGAATACGTCCATACAAATGCAACTTTTGCGGCAAAGACTTTTCAAATGGTTCAAACTGTCGAATGCACAAGCGCAAGACGCATCCTGAAGAACTCGCTGAGGAAGAGTCACGTGGCGTGGTGCATGCAACATTGCTGCCATTGGTGAATGAGTTGACCGAGGTCTCCAAACGTCTTAAGTCGCCACGCAAGGTAACGACTCCAAATAGAATGCAAATAAAAGCAGACACACAGCAAGAATCGGAAAGTGGCACGCAAACTACCGAAGCAGAAGAGGATGGGGATGATGCTGAGCAGCTGTATGAGCTTGTGGAAGATATTGAGTGCACATGA
Protein Sequence: MKADAVGAREEDMPDWHQWCRLCAKEHPDNINVYLRDGEMAWSSMLAVAIGKYFWVNIKMVDELSSVLCRECHELVDELITFSERVNRVQTLFATLQQGKTKFANDCLELRSRYGLDTDDWKHIISRPIKEESVKSNLAVDQYIEEVTEHYDTDVEILAEIEGEDMIDGDGSYETYSVHEAETETPEVAAAHLEPKNDEIVEETDEALEAEEYAYETVATYENAEVEEDHEDTQKQYKCDVCMKIYKRPMAYKRHMIESHNIEPTNLPVVECKQCQLCFLTESQLTVHLKTTHLHAKEKRESHCNYCGRCFTTQAALKRHVAGMHDNLKPFMCDTCGKVLKTNTALTEHKLVHTDECPFECQVCHRRFKNKARLKIHADTHNSSNYECSICGLKLNTRRTLNMHKLVHSDEKQYKCDICGAAFKRGKTLKSHLILHTGIRPYKCNFCGKDFSNGSNCRMHKRKTHPEELAEEESRGVVHATLLPLVNELTEVSKRLKSPRKVTTPNRMQIKADTQQESESGTQTTEAEEDGDDAEQLYELVEDIECT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00337793;
90% Identity: iTF_00337793; iTF_00336192;
80% Identity: -