Cfus010464.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chymomyza fuscimana
Gene Symbol
JARID2
Assembly
GCA_949987675.1
Location
OX465089.1:7276978-7284854[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.9e-22 1.3e-18 67.7 0.0 6 89 1874 1955 1869 1955 0.92

Sequence Information

Coding Sequence
ATGGTTGTCTCGAAAGACAACAAGCGTCGCCGTAAGGAAACGGAGACCCCTACGCCGCCGCTGCCAGCGCCAacagcggcagcgcagcagtCAACGGCAACAGCGACTGCGGCAGTGGAGTCATCACCCGAAATGCCCAAAAGAACGAAGGTGCAGGCACAACGCAAATTCGCCCAAGGCCAAAGCGCACCTGCATCCTCTAGTGCTTATAGCGCTGCATTAAGCGTAGCAACTCCAGGACCCAGCACCTCAGCGGAGGGCCAACCTCCCATTGAGATATTGCCAAACAAATGTCCTAAACCGCAAGATTTTCTGACGTTCCTTTGCTTTCGTGGCACACCCTCGTTGCCACCACATTTGGACTATTTAAATCAGGGCAAATCCAAAGAAACCGATTCAACTGCAACTACTAGTAataccaacaataacaacagcagcggcaataaaaaaaacaataccaaCAGAACGGCCAATAAAAAGAAGCGTGGCCGTCCGTCAAAAACGGCCACGAAAAATGAAGCCACTGATACAACAACTGCAACCAAAGCGGCTGAAATAGACAAAGCCACATCGACCGCGAAAATGACGGAGCCAAACGCCGATAAACCTCTCGCAAGCCCAAACAAAGCCGCAAGTGATAATTCAACAACGCCAATGCCAGCAGTTTTACCAGGCGCTGTGCGCAAGCGTGCAGAGGTCATAGCCGAGGGCAACCGCCGTGGCGCTCGACGTAGTGGCAAAGCTGCAACGCCCGAGCAGTCGATTACCGCGCCAACTGAAATCAAGCGCCGCTCCAATCGTGCCACCACAAAGGAGAGTAAGCTCATGTTAGATGGCGCTTCAAATGATGAAGAGGAAGACGAAGATGAGTATTTCTCGGCACATGATGCCTCTTCGAGAAATGGTGATGACACAAAGGCGGAAACTGCGCTTACTAAGATTCACCAGTCCACGGCAGCACGCAAATCAGAGACACCCTCTAAGGACAGCGAAACAGGAAAATCCACAGCGGGAAAGCGTGGCagaccagcagcagcagcaaaaaaaaactctgaAGCATTGCCTGTAGAGGCACCAGCATGCGAAAAGTCTAAGGAAAAGATTCCAGCGCCTCTAAAGCGAATGCGTCAACGTGAGTCGCCCATATTTATACCATCGCCAGAGTCATCAGGACGCATGACCAGACAACGAGCATTTTTTGAACCAGTGAAAGTTTTGCCTCAGCAGGAGCCAGAAAAAGAGGTAGAAGAATTTTCAAAGGAGCCCCAGGAGGAATCAACTGAGAAAAGAGCCCCCATTCACAAGAAGGAAGCTAAAGAAGTGACCAATGAAACCAAGGAAACTAAAGAGAAAATCAACTCTAGTATTTATGCCAAAGATGCAGCAAAGCAGCATCTGGAGAATGGTGACAAAGATAGCAGCAACAAGGGCAAAAAAAGTTTGAATGTATTCGATTTTAGTTCAGATGATGAGCAGCCTCTGGCCAAAGCCATCAAGCTAAAAAAAGGTGGCAAGACAAGTCccaaaaaagctgcagccgcAATGCAACGGGGCCGGAAGTCAGCGATTGAGATAAAGCAACTGGCTTTGCCTGAGATCAAAGTAGAGCCAATACCAAAGCTTGATAATGATAACAGCAAGGGTGTAACTGTTAAGCGTGCCAAATCAGGCAAGAAAAAACCCAATGAAACATTAGTTAATGAACCGGAACTGTCGCCACCATCGCCTAAAAAACCTAGTAGTGTAACTACAACAGTGGCACGACAGTCACGCAAAGGAAAAGGAAAATTAGAGGTGGATGCTGTTATCAAACCGCGCTCGCCCAGTCCACCAATGCGTAGTCAAAGACCTTCGCGAAAGACTAAAGAAGCGGCTGCCATATATATGGGCATTATAGGCCACAAACTGCAAATGGCAGATGACGAAGAAGATGATCTGTCTCTAAACAGCTTTCCCGACATACCCAATGTAAAGGAAAtggaaaaaatggaaaaagaaattaagaaaaatgcaGCACAACAGCAGCCGGGAAAGTTGTATCTGCCCGAGGCTTCGACGGGGCCAACGGCAGCAAAAAACCTACGTAAACCGTCGCCAAAACCGCCTACAAAAGTAGCCACAGCAGAAGCAGAGATTCCAAGCGCCAATGACGTAGTAACTACAACTCCAGAGGAAAAGCCACCACCCGCACGACGCGGACGTCCGCCAAAGCAGAGTAAGGCCACATCTGCAGCGGCTGCACCACCGAAACGTGAAATTGAAGGTATGCTTGTAAAAAAAGGAGCACTTGCAAAAATGGCATCTAGCGTGCACCAGTCCGAACAAGCGAAACCCAAAGCCAAGTCCGAACATAGCAATAAAGTCGACTCCGATGAGGAggaagattttttaattaacgaaGAGCTAAATGAAACCAAACGTAAATTGGAAAAAAGTTTTAGCGACTCTGATGATGAGCCGTTGGCGATCAAAGTACCGGCCAAGGGAAGTAGCGTTGAAAAGGACGAGCTAAGCCTAGGCCAAGATGTGCCCAAGCTGCTGTGCACGCCTCCCAAACAGACAGTAGCACAAACAACTATCAATACAACGCCAACGAATATGACGAGCACCACACAACTGACCATGCTACCACTGACCGCAAAGCCGTCGCAGTTTGGTGCATTGCCTATGCCGAGCACAAGCAGCAGCAATTCAATTTCGCCGCCTAGCTATCCCCAGCCTTTGGTCAGCACATCACCAGCAACGGCCACGCTCAAAGCAATGGACAAAAAATCACCGGTTCCGACATCCAAGATACTCAATGTTCCGGCTACCTACGCGATGCCAGGCAGCAATACCGTATTACCTGGGGTGTCCTATAACAAGACCTCTTCATATTTGCCACAGGCTTCGCCCCACTATCACACGCCTTATGTGCGTCCACCGCCCACACCGACGCATCAATTTGcggcaagcagcagcagcgtgaAAGCACCGCCCACAACAAATACATCTACATTACAACAATCTGCGTTAAAATACCAGACACCGCCTACTACATATCCACCGCCAATAGAGGCGTATCAGTGTCCCAAAATCAATCCCAACTTTTTGACACCCAAATACGAACGCAGCGCTTTGCCGCGTAGCAATAACTTTCCATCGCCATCACTTGTGTCACGTGGTTTGAGCAGTTTGTCCACGCCTGTGGCATCCAGCAGCGCAACTATAGCTAACGTCTCGTTGACTACAAAAAATTCCTTGCCGCCTCCTCTGGTACCAGCTACGCTACCAGGGAACCAGGTAACACATTGCAGTACCAGCACTGCGAATTTTAGCATGGCAACAACAGTAACAGCGGCAACATTCGCTCTGTCCACACCTTCAGTGACGCCGTCGAcatcagcagcggcagcagcagccactttagcaacaacTGTGGCACCCACGCCGCCGCCGGCCCACAGCGCTAATATTGTTAATGCCAATAACAGTTCGGATCCACTCAAGGATGAAATAGGCAGTATACTGGCAGCAAATCTTATGCCCAGCAAAGAAGAGTCgggtaaaatttttggcattgcCAGTGTCAGTTTGGCGCAGAGCTCAGGGCCCGATAATACCAAATGCACGCTAGGCAAATGTGGCTCCATACACAAACCAGTGCTGGGCCCGGTTGTACCCACTGAGGGCTATTTTGGCGACCAGTTATCTAGCAAGGAACGTCGCAAAGCCAAGGTTAATATGACGCATGAGCAAATACAGAAATGGCTTATTGAATGTTCTTCAAATCCCGATGAAATACAAGATGATTTGGATGATGATTTTGATGATAGTTTGCGGCCAAATCAATCAACAACTCCGCCGCCCACACGCGATGATAAAGAATCCACCACCTTTAGCAGCTCCTCTAAGAATACCCGCGAGCTGGGTAAGAGTGAGAGTGCCTGGTCGGCCAAGGGACCTTCCTTAAAAGCCACTCCCGTAGTGGCAGCGCCTGGGCGAAAGGAAGACGATGTGAAGGAAGCGAATGAGCTGGATTATGACAAGTCTGCCACGCCAGTAAATCTAACACAAAAGGCCAATGCAATTACGCATGATACAGCGAATAGTGCGACAAACTCTGATAAGAagttgacaacaacaacgacgacgacgctgGCTGATAAGAAAGCCAAAGAAGCTGCTAAAACAATAACAGCAGCTACAACTACAGCGGGAGCAGCTAATAAGAACGCATCACCCGCAGCTAAAGACAATAAAAGTCTGGTTCAAACCGCAGCAACAGCAAACAAACGTGGTGCTGGCACTCCCACTCCCGCCACACCACCGCCCACCAAACAAAATCGCAATAACAAAAAGAATGCCACTGCAGCAACGACTAGTGCAGTAACGGCGACAGCCATGAAGGCTACAACGCCGACTGCTGCGCCAACGACTCCAAAACGCATGCCTGTCTACAATCAAAAGGCAGCAAAGGTGCAACCGGAGCCTAAGCAGCAGCAACCACTGCCTGTAACAAGTCAAAAACGCGGCGATTCTTCAATATATGCATTTGGCAAGGAGGACGAGCAGGCGATGGCAAGCGCAGCAGCCAAAAATGTCGGCAATCGGCGAAAGAACGTTGCAGAAATAGAGCCTCCAGCGCCACCAGTGGTTAATGCTTTAAGCGAGCGCTCGCCTACCAAAAAACGCGCAGCAGCTACAGCGGCAGCCACCGCAGTGCAACTAACTTTAAGTCCCACGGAGAATTGCAAGCTGCTAAAAGTTGGACGTGGTGGCAAAAAGCAACATGCAATAGAGCCACCTGCTGCAACAAAATCCCAGGCGAAGTCAATGGCAGCTGATGGAGACTCCGATCCTGAGGGAGCTACCTTTTATATACCCTTGCAAGGTGCAGGTGTTGGTGGCTCTGGCGATGGAGGCATCCAAGGCGTGGCTGTTAAGTTAGGGCGCGAGGGACCCGATGGACCCAATCAAAAGGTGGTCATGCAGGCCACTCTTGTAACTAAAGCGCAAATGGATACAAACTCCAAGCCGCTGCCGGACTCAATCAATACGAATGAACTGGTTAAAACATTGTTAAATGCAGCTAACACCGACGCTAATGCTGCCGGCAGTGGTAAAAAATCATTGGCCGGTTCGGCCTCCAATAGCTTAAAAGGGGCGCCTATAGGTAGCACACAACAGCGAAGAGGAGCAGGAGAACAGGCCAGCACTTCTGCAGCGGCAGCGAATGCCAGCAATAGCTTGGTCCGCGTCAACTCTAATTCATCGCTCTTCTCCGGCTCCGTAAAATCCCGCACGGCAGCGCAGGCCAGCACAACGGCCGCTGCCATAGCCAAAAAATACAAGGATGATACTCCTATTAAAATGGCCAATAACACAGCATTTCCTCGGCACGATGATCCGACGCAAATGGTAGAGGCACCTATCTTTCGTCCCACCGAAAAGGAGTTTGCCGATCCCATAGAGTTTATTGAGAGAATAACTCCTATAGCTGCTCGATTTGGTATTTGTAAGATTATACCACCGGCTACATTCAAGCCAGAATGCCGTATTTCAGACGAAATGCGTTTTACGGCCTATAATCAGTATGTGCACAAGATGCTGCATCGTTGGGGACCCAGCGCAAAGGAACTGAGCGCTATAAAGAAGTATTTGGCCACACAAAGCATTGTGATGAATCATCCACCTTGGATAGGCGGTATGGAGGTAGATCTACCACGTCTTTATCACACCGTACAAGAACTAGGAGGTCTCAAGGAAgttattgaaaagaaaaaatgggCGCGTGTAGCCGAAGAGATGTGCATACCTAAGTTGGCTCAGGATCGGGTGACCAAACTGGATGATATCTATTGCAAGTACCTGCTACCCTATGATACACTATCTCCAGCGGAGCGACAGAAACTTTTCGATGAGGTTGAGGCTGATTGGGCCAAGCGTGAGGCGCGTGCGCGACGTAATGCGGATCGTTTTGTAAATACAGAAAGTGTTTCCAATGAAGAAGATGATGTGTCATCAGATGAAGATGAGGAGTCAGAGGAGGAAATTGATGGCGTGTCCATGGAGTGCATTGTTAAGGGACGCAGTATGGCGTTAAGTCAGTTCTATCGTATAGCACGTAATACCATGGCACTGTGGTTTAAAAACACCGACCCCACTGTTAATGAGGTTGAAGCCGAATTCTGGCGTCATGTGGCCGTGCGTGATAGTCATGTATGTGTGCATTCAGGTTCCATTGATTCCTCCGGTTGGGGTTATGGTTTTCCTAGCCCGGGCCCCAAGGGCAAGGGCTCAAATTATGCGCGTCATCCATGGAATCTAAAGGTGTTGACGAACAACGCTAGCTCTGTGCTGCGCTCACTGGGCCCTGTAATGGGTGTGACTGTGCCCACATTACATGTGGGCATGCTTTTCTCAGCCTGCTGTTGGTACCGTGATCCTCACGGTCTGTCTTGGATTGAATATTTACATACAGGGGCCTCCAAACTTTGGTATGGCATACCTGATGATCAGAGTGCCAATTTCCGTGCAGCGCTGACCTCATTGATACCTACGCATTGTCAGAACAAGACGATTTGGTTGCCTTGTGATACAGTTATGGTGCCGCCGCATATGCTTACGGATCGTGGAGTCTCATTGTGCCGTATTGAGCAAAAACCTGGCGAATTTATTGTGGTATTTCCACGGGCATATACTTCAAGTCTGGCCACTGGTTATGTGGTATCAGAAAGCGTGTATTTTGCAACAATGTCTTGGTTGGATTTAGCCAAAGATGATTTCAGGgacATACACGAGAGCTGCGAGCCAGCTATGTTCTCTTTGGAGCAGCTGCTCTTTGCTTTGGGCTACGATCAGCGCGTGAATTCAGATGCATTGCAACAGATGTTGCCCATGTTAAATGAGGTGTGCGAAAAGGAATCTGCGGCACGCGAACAGCTAAGAGCTGCTGGCGTTACTTCCGCCGAAAAGGTGCAATTAGAGAAGAGCCAAAAGgccaaaaagcaacaactaccACCCTATAAATCCATCGAAAGCGAATGCGATCTCTGCCGTGCTAATCTCTACATATCCATGGTGCGTACCGAAGAGGGCAATGTCTATTGCCTGCAACATGCGCTAAAAAATCTCAACAATGGCAATATACAAGCCAAGCAATGTAAACTAATCTATGCCTATAATGTAGATGATATACAGCAGCTCATTCGCACGCTGCAGGAGAAGATTCAGCAGAAGCAGCGTCAGGCACTGTCAACAGTTAAGAAAAAGTAG
Protein Sequence
MVVSKDNKRRRKETETPTPPLPAPTAAAQQSTATATAAVESSPEMPKRTKVQAQRKFAQGQSAPASSSAYSAALSVATPGPSTSAEGQPPIEILPNKCPKPQDFLTFLCFRGTPSLPPHLDYLNQGKSKETDSTATTSNTNNNNSSGNKKNNTNRTANKKKRGRPSKTATKNEATDTTTATKAAEIDKATSTAKMTEPNADKPLASPNKAASDNSTTPMPAVLPGAVRKRAEVIAEGNRRGARRSGKAATPEQSITAPTEIKRRSNRATTKESKLMLDGASNDEEEDEDEYFSAHDASSRNGDDTKAETALTKIHQSTAARKSETPSKDSETGKSTAGKRGRPAAAAKKNSEALPVEAPACEKSKEKIPAPLKRMRQRESPIFIPSPESSGRMTRQRAFFEPVKVLPQQEPEKEVEEFSKEPQEESTEKRAPIHKKEAKEVTNETKETKEKINSSIYAKDAAKQHLENGDKDSSNKGKKSLNVFDFSSDDEQPLAKAIKLKKGGKTSPKKAAAAMQRGRKSAIEIKQLALPEIKVEPIPKLDNDNSKGVTVKRAKSGKKKPNETLVNEPELSPPSPKKPSSVTTTVARQSRKGKGKLEVDAVIKPRSPSPPMRSQRPSRKTKEAAAIYMGIIGHKLQMADDEEDDLSLNSFPDIPNVKEMEKMEKEIKKNAAQQQPGKLYLPEASTGPTAAKNLRKPSPKPPTKVATAEAEIPSANDVVTTTPEEKPPPARRGRPPKQSKATSAAAAPPKREIEGMLVKKGALAKMASSVHQSEQAKPKAKSEHSNKVDSDEEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPAKGSSVEKDELSLGQDVPKLLCTPPKQTVAQTTINTTPTNMTSTTQLTMLPLTAKPSQFGALPMPSTSSSNSISPPSYPQPLVSTSPATATLKAMDKKSPVPTSKILNVPATYAMPGSNTVLPGVSYNKTSSYLPQASPHYHTPYVRPPPTPTHQFAASSSSVKAPPTTNTSTLQQSALKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSALPRSNNFPSPSLVSRGLSSLSTPVASSSATIANVSLTTKNSLPPPLVPATLPGNQVTHCSTSTANFSMATTVTAATFALSTPSVTPSTSAAAAAATLATTVAPTPPPAHSANIVNANNSSDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYFGDQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDSLRPNQSTTPPPTRDDKESTTFSSSSKNTRELGKSESAWSAKGPSLKATPVVAAPGRKEDDVKEANELDYDKSATPVNLTQKANAITHDTANSATNSDKKLTTTTTTTLADKKAKEAAKTITAATTTAGAANKNASPAAKDNKSLVQTAATANKRGAGTPTPATPPPTKQNRNNKKNATAATTSAVTATAMKATTPTAAPTTPKRMPVYNQKAAKVQPEPKQQQPLPVTSQKRGDSSIYAFGKEDEQAMASAAAKNVGNRRKNVAEIEPPAPPVVNALSERSPTKKRAAATAAATAVQLTLSPTENCKLLKVGRGGKKQHAIEPPAATKSQAKSMAADGDSDPEGATFYIPLQGAGVGGSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPDSINTNELVKTLLNAANTDANAAGSGKKSLAGSASNSLKGAPIGSTQQRRGAGEQASTSAAAANASNSLVRVNSNSSLFSGSVKSRTAAQASTTAAAIAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPTEKEFADPIEFIERITPIAARFGICKIIPPATFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVSSDEDEESEEEIDGVSMECIVKGRSMALSQFYRIARNTMALWFKNTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNASSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDALQQMLPMLNEVCEKESAAREQLRAAGVTSAEKVQLEKSQKAKKQQLPPYKSIESECDLCRANLYISMVRTEEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRTLQEKIQQKQRQALSTVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00335651;
90% Identity
iTF_00337298;
80% Identity
-