Ccos004325.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- elt-1
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000112.1:1103469-1122219[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 5.9e+03 -3.0 2.0 1 10 175 181 174 195 0.55 2 2 9.8e-18 3.1e-14 52.3 8.6 1 35 228 261 228 262 0.97
Sequence Information
- Coding Sequence
- ATGCCACATAACGCCCATGGTACCGTACGTTTTATAAGCGAAGATGCCGCTCGATTTACCAGCTCAAGCGCCGATACTGAGGCCCCCGGCGCCAATATGTATTACGATGCTAATAATGTAGTCGATGCAACCGTGCATGCCAATGAGTCCAAGACCTACGCAGATCTGGGTAACGCCTATGCGTTCCCGCCCAATGCCACTTTTGCCACAAGCAATGCTTATTCAGCCCCAGGCAATACCATCTATAGTGTGCCTGCGGCAAATTTAAACTCGTTGCGTCAAACAGCAGCGGGTCCCTATCAGACGATTTCATTTTTGGAAAGTGGCACAACCAACGAGTCGGTGCTATGGTCCAATGCAGCGGATTATCAAAATGTATCTTATGTGATCGATGAGTATCAATCTAGCAATATGACGCCTGCGCACTGGCCCTCGGCACCGAATATTGGCAACTATGAAGCCACTTTGGCTGCAACGACAGGTACTCCAACGTCCTCACACGCCGGCATACCGGAACTTAAGTGCGAATCGTGCAATTCGCCCTACCTACGGAAGGGCGCGGACTGGTTTTGTGCTAGCTGCACAGGATTTGTACGCGTTCCCGCGCATGCTCGCATGCAGCCACGTCAAGCTAAGCCGAAAGCTGCTGCTGCGCCAAATAATAGACGCAATGGCGTATCCTGTGCTAATTGCCAGACTAACACCACGACGCTGTGGCGCCGTAACAATGAGGGCAATCCTGTGTGCAACGCTTGCGGGCTTTACTTTAAGCTGCACAATACAAATCGACCGGCATCCATGAAGAAAGATGGCATCCAGAAACGAAAGCGCAAACCAAAGAATAATGGCGGAGCCCCTATGCATCGAGCACCCTTGCCAAGCATGCAACAAGGCGTAAATTTAATGGTTAATAGCGGCACGATATATCCCTCCCAAATGTCGGTGGGATTGTTGAGCAACAGCCAGCACAATGCAAGTCCCGAGTTGCATGACATGTCACATGTCCCCGCGAATGCTACTTCTGTTGTTGCAGCTTCGGGGTCACGTGTGGTGGCGATCGCCCTGAATCCCACAGCACCCCCTACTCCAGAAGCTACGACAGGCAATTTAAATATTTCTCGTCATCATGGTACTGGGGAAAGTCATTCGTCTTTTAGTCAGCAGACTCCAGTGCAGAGTCAATCGCCGCATTTACCTAATTCGAGTACGCTGAACCGACAAGTTGCGCAATCGGTAACACCTATCGAAAACACCAACGGACGAAGTTCAAATGGAGAACTAGCAACTAGCGTTATAACTCGCACTGGACTGCCGGAGCGTCCCTCGAATAACTAA
- Protein Sequence
- MPHNAHGTVRFISEDAARFTSSSADTEAPGANMYYDANNVVDATVHANESKTYADLGNAYAFPPNATFATSNAYSAPGNTIYSVPAANLNSLRQTAAGPYQTISFLESGTTNESVLWSNAADYQNVSYVIDEYQSSNMTPAHWPSAPNIGNYEATLAATTGTPTSSHAGIPELKCESCNSPYLRKGADWFCASCTGFVRVPAHARMQPRQAKPKAAAAPNNRRNGVSCANCQTNTTTLWRRNNEGNPVCNACGLYFKLHNTNRPASMKKDGIQKRKRKPKNNGGAPMHRAPLPSMQQGVNLMVNSGTIYPSQMSVGLLSNSQHNASPELHDMSHVPANATSVVAASGSRVVAIALNPTAPPTPEATTGNLNISRHHGTGESHSSFSQQTPVQSQSPHLPNSSTLNRQVAQSVTPIENTNGRSSNGELATSVITRTGLPERPSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -