Ccos010237.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- CSRNP3
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000035.1:27712-29769[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.31 5.8e+03 -3.0 0.3 75 96 68 89 41 110 0.52 2 3 0.027 5.1e+02 0.5 0.6 29 90 260 325 257 358 0.50 3 3 9.9e-96 1.8e-91 305.9 10.6 2 218 358 560 356 560 0.91
Sequence Information
- Coding Sequence
- ATGGATAGCATGTTCAGTCCTATCAAGAAAATATTCACCTATATACAAAAGAATGCCAGCGGAGGCACAATGTTTGGTAATACAAATAACAGCGTAACAGCCAACGAGGAAGGCGTAGCAGCAAGCAGCAGCAATGGCAGCTATAGTGAACTGCCAGAGGCAAGCCCTAAGACACAACTGACTGCAGATCACGATGAATCAGCTATGGAAAGCTGTAAAGAAGATTTGTGCTCCAGCATAGAGGAAGACGATGAACAGTTTGATGATATTGAGCGGCAGTTAAAAACGTCTATTATTGATGCCAGTAAAATGAATGCAGGCCTGAAGGCCAAGACTTTAGTTAAGCCCATAGTTTTGTCACCGAACTTACAGCTAGACGATGAGCTGGCGGACTTTGCGCATGAGCCAGTGGAGTTAAGTGTAAACGGAGAGGATGATATTGAAGAGCAGTTCTTAGAGTTGGATAACTTTCCAAACAATGAAATTATTGTATTGCACGATACTGATCTCAATTCATCAATAGCGTCGGATAATATCTCCGAAGATCCGCTGGCCATAGATGACTTTACGCAACCCTTGGTGCGTGATTCAGACAATGTGCTGGACTCATCTTCGGTGACTACAAACGAAGAGGTGGACGCTAGTACAGATTTGCTCTGGCTAAAACTACCACCAGAGGGCGAGGATCAGGTATCAGAAGAGCCAGCAGCAGCTATGAAAGCTAGAAGCAGCAGCACGCCACAGCATGCAAAGACCAAAGAGGATGAGCTACGCGATGGTGGCTCTGACTCCGGCATGGGCAGTGAGACCTCCACGCTACATAATACGTTAAACAACTTAAGCGACGTACAACATGTGACGCCACATAAAACTGATGAACCGACCAGCCCACAATTAAAGTCAGCAAAGGAATCAATCCAATCCAATGAGTTGGAGCAAGCTTCCACCTCTCAAGCCAGCGTGGAACCCCAGAAACCGCTTCGTTCTAATCTTAAACGCAGACTAGAAGATGCTGATGGTATGGATCTGGGTTTGTCAACCAGCAGCACAGAAATAATTCAACAGAAGCGCCAAAAACGTTCCATCAACTTTGACAATGTCAAAATTTACTACTTTCCACGCCAGCAGGGCTTTAGCTGTGTACCGACAGCAGGGGGTTGTACGCTAGGCATGGGTGCCAGGCATATTGCCTTTAAAACCATGACACTGGCAGAGCATGCAGCAGAATTAAGACGCGCGCATCGGAATCAAAACCAGGATTTGCAGCCGCGTGGTTCTTCCAGCGATGATAGTGAAGAATCCGAGGAGGATTATTTAAGCGAGGGCAGCGGCTCAGATGCAGATGGTGACTCCAATGGCTTTCTACAGCCTGTTACACCCAAGCAACGGCGTGCGCTCTTGAAAGCAGCCGGCGTGCGTAAGATTGATGCTACCGAGAAAATTGACTGCCGCGATATACGTAATTCTCGTGAGGTATGTGGTTGTTCCTGTCGTGAATTCTGCGATCCGGAGACCTGCGCCTGCAGCCAGGCGGGCATCAAGTGTCAGGTGGATCGAGCCATGTTTCCTTGTGGTTGCACACGTGAGGCTTGTGGCAATACTGTTGGTCGCGTGGAGTTTAATCCAACACGCGTACGCACGCATTACATACACACCGTCATGCGTTTGGATATGGAACAGCGACAAGGACAGAATCCGAGTAGTCTCAGCTATGGCAGTACCGCATCACCTGTATCACATTGTTACTTCATGCAGACACAGTCCAACTATAGCTCTGGGTATGCCTCGCCTGCCTATACGCCTGATGGCACAGTCAGCTATTACCAACAGCAGGCTCATGGCCCGCCGACTCAACAACAAGCGCTTGAACAACAGCCAGGCTACGGCAGTCATCAGGACTTACATACACCGCAGTATCCATTGGACAGCCTGGACTCCGGGCTATTTACCAGCGGCAGCAACGCTACGCCATCTTATGGCGAGCTGCTGACGCCCACCTATCATAGTCTTAGCTATGGTAGCGCCAACAGCGCAAGCACAACTCAGGTAAGTTATTAA
- Protein Sequence
- MDSMFSPIKKIFTYIQKNASGGTMFGNTNNSVTANEEGVAASSSNGSYSELPEASPKTQLTADHDESAMESCKEDLCSSIEEDDEQFDDIERQLKTSIIDASKMNAGLKAKTLVKPIVLSPNLQLDDELADFAHEPVELSVNGEDDIEEQFLELDNFPNNEIIVLHDTDLNSSIASDNISEDPLAIDDFTQPLVRDSDNVLDSSSVTTNEEVDASTDLLWLKLPPEGEDQVSEEPAAAMKARSSSTPQHAKTKEDELRDGGSDSGMGSETSTLHNTLNNLSDVQHVTPHKTDEPTSPQLKSAKESIQSNELEQASTSQASVEPQKPLRSNLKRRLEDADGMDLGLSTSSTEIIQQKRQKRSINFDNVKIYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHAAELRRAHRNQNQDLQPRGSSSDDSEESEEDYLSEGSGSDADGDSNGFLQPVTPKQRRALLKAAGVRKIDATEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDMEQRQGQNPSSLSYGSTASPVSHCYFMQTQSNYSSGYASPAYTPDGTVSYYQQQAHGPPTQQQALEQQPGYGSHQDLHTPQYPLDSLDSGLFTSGSNATPSYGELLTPTYHSLSYGSANSASTTQVSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -