Ccos003500.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- -
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000433.1:551681-552740[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-09 1.4e-06 28.4 0.3 4 45 105 146 103 147 0.98 2 2 7.5e-06 0.0088 16.2 0.1 3 43 257 297 256 300 0.94
Sequence Information
- Coding Sequence
- ATGCGATTCAATCCAGAGCCCGCTTTTTCTATAGACAAGGGTGGTGACAATAACTCGGATGAATTTCAGTTGACGGCACCGCACAAGTGTGCCCTACGCATAAGTACACGCGGCTACAAGTGCAAAGTGTGCATTGGATCCGAACATCAGGCAAAAGTTCCCGATTACCAGTCAGAGCAACAACAGCAGTGCATGCGCAACTTGGAAAGCTTGGTTTGCATCGAGCAAGCTCTAACTCTGCTGCAAGACAACTCGCATGACTTCAGCGACGCTTTGAAGCAGGGCAGTAACTATACCACAACCAGCGCCTTGTGGTCACACGAAGAGCGCCAGCGTTTTGAGTTTCTACTACGGCGTCATGGCACTAGCTTTGAGCGTATTAAGCAATTCATGCCATGGCGGAGCATAGCTGAACTGTTGGATTACTATTATACCTGGGTGCCTGCCCAGAACGATGTAAGCTATCTAAAGCTGCTGCGCATGTGGAAAATGGTGCCAGATGCAGAGTCCAAAGCTGAAGTAGCACTCCAGTTGCCGCCGCAGTTGTCACCAGCTCTCAAGCCACCGTATTCTAATGAAGAGTTGCTTGATTTGGCCAAGAAAAACTGTAGCTCCTGTTCACGCGCTGACATCAAGCAAACGATTGCATTGCTGCAGGCACAAATTTTGTCGCAACGCCGTCAACTGGCCGACAAATCCGCTTTAGTGCTGGACAATCAGAATGAAATACGTCGCAGTCTGAAGCAAAGTGTTTCTCGTAATTTTCGCGAGTGGCGCCCTTTGGATAAGCAGCTATTGATGTTTGCGCTACAGGATCATGGCTGTAACTATGGCTTGATTGCACGCATTGTGCGCACTAAGACAGAGCAGCAAGTGCAGAAATACTACGAGGAAAACAAGGAGGAGCTGCAAATCTACGTCAAGGAGCTGATGGGTGTTGAAACAATCGAAACAGTGCAGCAGGAATCCAAGGAGAGCTTTTAA
- Protein Sequence
- MRFNPEPAFSIDKGGDNNSDEFQLTAPHKCALRISTRGYKCKVCIGSEHQAKVPDYQSEQQQQCMRNLESLVCIEQALTLLQDNSHDFSDALKQGSNYTTTSALWSHEERQRFEFLLRRHGTSFERIKQFMPWRSIAELLDYYYTWVPAQNDVSYLKLLRMWKMVPDAESKAEVALQLPPQLSPALKPPYSNEELLDLAKKNCSSCSRADIKQTIALLQAQILSQRRQLADKSALVLDNQNEIRRSLKQSVSRNFREWRPLDKQLLMFALQDHGCNYGLIARIVRTKTEQQVQKYYEENKEELQIYVKELMGVETIETVQQESKESF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00335813; iTF_00338269;
- 90% Identity
- -
- 80% Identity
- -