Ccos011033.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- F54F2.9
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000269.1:391555-395580[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-08 8.1e-05 22.7 0.0 4 38 307 344 304 345 0.87 2 2 7.7e-08 9e-05 22.6 0.5 3 43 398 444 396 446 0.87
Sequence Information
- Coding Sequence
- ATGTTTAGCAAAACACTTGCTATGTTACTCGGAAGCTGTTTACTGCTACTGGTTTTCAGTGGCTCTGCACAGGCCTGGCATTCAGAAGACCTAGGAATTTTCGACTTGGTCGAAGAGATCAACAAAAATTTTTACGAGTTTATGGGCATTAATCAAACCGCCACAAATAACGAAATAAAACGTGCCTTTCGGACGCTTTCGATAATCTTGCATCCCGATAAGAATCCCTCCGAGGACGCCAACATTCAGTTTCGCAATCTAGTTTCAATCTACGAGGTGCTTAAAGATGCTTCCAAACGCGAGAAATACGACAAGGTCTTGCGCGATGGACTTCCCAACTGGAAATCAGCTTTATACTATTACCGTCGCATGCGGAAGATTGGACTATATGAAGGCGCTTTTATATTGTTCCTCATTACAACCGTGGGACAGTATTTGTTTGCTTGGGCCGCATATTTGGAAAAAAAATACACAGCAGAACAGGTTTTTGGCACTAAGTTAAAAAAGCTGCAAAAGAAGAACAAAAACATCGATATGGTCGTGATACTTAGTGAAATTCCTTTTCCTTCGCTGCTCAATACGCTGCCTTTTCAAATACCGTTGGCTATATGGAGTTTGCCTAAGACAATTAAAAGTGGTTTTAGCAAGGCAAATGAGTTGAAGGAACTGGCGCTAGAAAAACGCAGACAGGAACTGGAGGCTGCAAAACGTCAGGAAGAACAAGAACGCGAAATAGAGGAGCAAGCACGTCTGCGCAAGGAGCACAAAGAAAATTTACGTAAACGAAAGCAAAATACCAAGGCTCCTGAGAAAACAGAAGAAGAGCTGCGTGGCTATGCCCAAATACAAGCGCGGGAGCTTACTGAAGATGATGCTGTGCGTCCAGTTTCACAAAAGAGCACCGTCACAGGCGGTTTTTGGACCGATGAAGATCTCACCGAGCTTATACGCCTGGTCAAAAAGTATCCAGGCGGCGCAGGCAGCCGTTGGAACACCATAGCCGAGTCCATGAACCGCACTGTGCAAGAGGTCACTTTTATGGCTGCCAAAATGAAAGAAAATGGATATCGCATACCTGGTCAAACAGACAGCGTAGCTAAGCATATATTACAGGAGTCGCAGCAGGCTGTGCGCAAGGAAAAGGTGAAAAAAGGTGCAAACAATGAAAAGAATATGCTCATACATGAAACCAACTGGACGCAGGAGCAACAGCGTGCTTTGGAGGCGGCAATCGTCAAATATCGGCAAAATGTTAGCGGCGGTGATCGCTGGCAAAAGATAGCCAATAGTGTCCACGAAAAGACCAAAGAGGAGTGCTTGATACGTTATAAGTACCTGTGCCAGCTGGTCAAGTCTCAAAAGAAAGCTGAAGAAGAGGCCGGTCCGCCTGTCGAATCGGTCGAATCATTTCCTAACCAGAATGGCGATCAACCCTCCATTGTCAGCTTGGGTACAGAGCTTGAAGAAGAAGCGCACACGACAAAAAAGCTAAGTAAACGCGAAAAACGACGCCGCAAACGCGACCTATCGAGCGACGAGGACTCTGAAGATGCATATCAATATGAAATATGTTAG
- Protein Sequence
- MFSKTLAMLLGSCLLLLVFSGSAQAWHSEDLGIFDLVEEINKNFYEFMGINQTATNNEIKRAFRTLSIILHPDKNPSEDANIQFRNLVSIYEVLKDASKREKYDKVLRDGLPNWKSALYYYRRMRKIGLYEGAFILFLITTVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKKNKNIDMVVILSEIPFPSLLNTLPFQIPLAIWSLPKTIKSGFSKANELKELALEKRRQELEAAKRQEEQEREIEEQARLRKEHKENLRKRKQNTKAPEKTEEELRGYAQIQARELTEDDAVRPVSQKSTVTGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRTVQEVTFMAAKMKENGYRIPGQTDSVAKHILQESQQAVRKEKVKKGANNEKNMLIHETNWTQEQQRALEAAIVKYRQNVSGGDRWQKIANSVHEKTKEECLIRYKYLCQLVKSQKKAEEEAGPPVESVESFPNQNGDQPSIVSLGTELEEEAHTTKKLSKREKRRRKRDLSSDEDSEDAYQYEIC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00616831;
- 90% Identity
- iTF_00338266;
- 80% Identity
- -