Ccos003312.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- CDC5L
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000588.1:100743-103530[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6e-10 1.9e-07 31.2 2.4 18 46 2 31 1 31 0.96 2 3 3.8e-12 4.5e-09 36.3 0.1 1 45 37 80 37 81 0.93 3 3 6 7e+03 -2.7 0.8 6 18 475 487 475 487 0.89
Sequence Information
- Coding Sequence
- ATGAAATATGGCAAGAATCAATGGAGTCGTATAGCGTCATTGCTGCATCGAAAGTCAGCTAAACAATGCAAGGCTCGTTGGTATGAGTGGCTAGATCCCAGCATTAAAAAAACGGAGTGGTCGCGCGAGGAGGATGAGAAGCTACTACATTTGGCGAAGCTTATGCCCACTCAATGGCGAACGATCGCGCCAATTATTGGTCGCACGGCTGCGCAGTGCTTGGAGCGATATGAATATTTGCTCGATCAAGCGCAGCGCAAGGAAGATGGCGATGACACAATGGACGACCCGCGTAAATTAAAGCCAGGGGAAATCGATCCCAATCCCGAAACAAAGCCTGCACGCCCGGATCCAAAAGACATGGACGAGGATGAGCTAGAAATGCTATCAGAGGCGCGTGCTCGTCTGGCTAACACGCAAGGAAAAAAAGCTAAACGTAAGGCACGTGAAAAGCAGTTGGAAGAAGCGCGTCGTTTGGCCACTTTACAAAAACGACGCGAATTGCGAGCTGCAGGTATTGGTAGTGGAAACCGCAAGCGCATTAAAGGCATTGACTATAATGCCGAGATACCCTTTGAAAAGCGGCCAGCACTAGGATTTTATGACACTTCTGAGGAAAGTCTTCAAAAGATTGAACCAGATTTTAATAAAATGCGGCAGCAGGACTTGGATGGCGAATTACGCTCTGAAAAAGAAGAACGCGAACGCAAAAAAGACAAACAAAAACTAAAGCAGCGCAAAGAAGATGAGGTTCCAACCGCCATGCTGCAGAACCAAGAGCCGGAGCGCAAACGTTCAAAGCTGGTGTTGCCCACACCACAGATTTCTGACATGGAACTACAACAAGTTGTCAAACTTGGAAGAGCCAGTGAAATGGCCAAAGATATAGTAGGCGAAAGTGGCATTGAAACAACGGATGCACTTTTAGCAGACTACTCAATCACACCTCATGTGGCTTCCACACCTCGCACACCAGCAGTGTATACAGATAGAATACTGCAGGAGGCTCAAAATATGATGGCGCTCACCCACACTGAAACTCCATTAAAAGGGGGACTAAATACACCTCTGCATGAGTCGGACTTTTCTGGAGTACTTCCCAAAGGAGTCGCCACTCCCACGCCCAACACAGTTATTGCAACACCTTTTCGTACCCAACGTGGCGCTGGCGAGGCGACTACCCCAGGCATCTTCTTAACGCCTTCCTCGGGAGCTTTGGTACCTGTTGGCAAAGGTGGTGTAAACGATGTGCCTACTCCGGCATTAGTTCGAGATAAACTGAGCATTAATCCCGAAGACAGCATTAGCGTTGCTGGGCCGCTGACGATTGGAAAGAGCTACCAGAAGCAGTTAAAATCGACACTGCGAGAGGGATTGGCCACGCTGCCAGCTCCAAGAAACGATTATGAGATTGTGGTTCCTGAGCAAGAAGACAGTGATCTTTTAGAGTTGGTTCAAGAACCAACAGTCGAGGACCAGGCTGATGTAGACGCGCGGCTGCTAGAAGAGCAGGAGGCACAACGTAAACAAGCGCTGGAAAAACGATCTCAAGTTATACAGCGTGGCCTCCCGCGACCCACTGAAGTCAATACAAAAATACTGCGCCCCCAATCGGAAAAACAAAATCTTACAGAACAACAGCAAGCCGAAGAATTAATTAAGCATGAGATGATAACTATGCTGCTATATGACTCCGTTAGAGATCCTGTTCCTGGACAATCACAGCACAAAATAGACCAGTTGCATAGCTACTTTAAGGCTAATCCCTATGAGGAAATGTCAAAGCAAGATCTGGCAAAAGCTAACGAAATGTTGATTGACGAAATGGAAACCGTAAAGGAAGGTATGTCACACGGCGAGCTTGCTCTTGAAGTTTACGCACAAGTGTGGCAGGAATGTCTTGGCCAGGTTCTATATTTGCCGTCTCAGCATCGTTATACACGTGCGAACTTGGCCAGCAAAAAGGACCGTTTAGAGTCAGCTGAGAAGCGCTTAGAGCAGAACCGCCGCCACATGGCGAAGGAAGCCAAACGTTGCGGAAAGATCGAGAAAAAACTTAAAATTCTCACTGGTGGCTATCAAGCGCGAGCGCAAGCTTTTATAAAACATATACAGGATACGTATACACAGATAGAGCAGAACACGCTCTCGCTTTCTTCATTCCAATTTCTTGGTGAGCAAGAGGTAATTGCTGTACCACGTCGCCTTGAGTCTCTTCAAGAAGATGTGCGCCGCCAAATGGAGCGAGAAAAGGAGTTGCAGCAGAAGTATGCTACCTGGGTTGAAGAACGAGACTTACTTGTCGCAGAGATTGAGAAAATAACTGGATCAAAGCCAATATTGGAAAAAATTGTTTCCGAAAATCGCGACTTGGAGAATTAA
- Protein Sequence
- MKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQRKEDGDDTMDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLATLQKRRELRAAGIGSGNRKRIKGIDYNAEIPFEKRPALGFYDTSEESLQKIEPDFNKMRQQDLDGELRSEKEERERKKDKQKLKQRKEDEVPTAMLQNQEPERKRSKLVLPTPQISDMELQQVVKLGRASEMAKDIVGESGIETTDALLADYSITPHVASTPRTPAVYTDRILQEAQNMMALTHTETPLKGGLNTPLHESDFSGVLPKGVATPTPNTVIATPFRTQRGAGEATTPGIFLTPSSGALVPVGKGGVNDVPTPALVRDKLSINPEDSISVAGPLTIGKSYQKQLKSTLREGLATLPAPRNDYEIVVPEQEDSDLLELVQEPTVEDQADVDARLLEEQEAQRKQALEKRSQVIQRGLPRPTEVNTKILRPQSEKQNLTEQQQAEELIKHEMITMLLYDSVRDPVPGQSQHKIDQLHSYFKANPYEEMSKQDLAKANEMLIDEMETVKEGMSHGELALEVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLEQNRRHMAKEAKRCGKIEKKLKILTGGYQARAQAFIKHIQDTYTQIEQNTLSLSSFQFLGEQEVIAVPRRLESLQEDVRRQMEREKELQQKYATWVEERDLLVAEIEKITGSKPILEKIVSENRDLEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00679419;
- 90% Identity
- iTF_00339075;
- 80% Identity
- -