Ccos015884.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- -
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000599.1:11341511-11345412[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 8e-09 9.3e-06 25.7 0.0 1 45 231 276 231 277 0.96 2 5 1.6e-06 0.0019 18.4 0.0 3 44 286 331 284 333 0.91 3 5 4.9e-07 0.00057 20.0 0.0 1 46 339 385 339 385 0.90 4 5 3.9e-10 4.6e-07 29.9 0.0 3 44 393 435 391 436 0.95 5 5 6.6e-09 7.7e-06 26.0 0.1 2 44 503 546 502 548 0.95
Sequence Information
- Coding Sequence
- ATGACAACGAATAGTTTTGAACAGCTTAAGGAGATAATTCAGCAGCAGCTGATAGAAATCGCCGAAGCATTGAAGGTAACCACAGCTGAAGCAAGCGCAGCCAGCGCCTTACGTATTAACCAAACGCTCCAGCGTAATTTGGAGCGATCCTACACTAACGTATTGCAGCTATTAAAAACGGTGCGAGCGCGCTATGCACTCAATAGCGAAATTATTAAGCAGCGTCTATGTGTGTCACGTGTTAAAACCGATGAAAGAATCTCAAAAACCGGCGCTTGGCTGAACGGTGGTAGCTATAGATTTAAGGGCAATCTTTATTTTCGCGATGCGTCTGGACGTAGTTGTCCCAATAATGATGACTATGAGCGGCGGAGCCATACAGAAATGTTTCCAACAGATTTTGATATGCGTTCGAAACATGTGTGGACAATGTTTGACAAGAAAAATGTCGTTATGGGTGTCAAACAGCAGCTGTTGGATCACGTTAATTTAAAGCAACAATCCCAACCCAAGTCTCGTAAAAGAAATGCAATAGATCTGCATACAAAGTCCTTGGCGAGTTTGTTGGATTCCGTCGACAGCAGCTTCCGTATTGATTGGCAGCAACTTAGTTCGATGGAGATTCAATGTCGTCATTCGTCTTATAGCTGCGAAGCTATGTGGGAGGTCTATCTACATCCACGCATAAACCGCAGCGCATGGACTCTTGATGAGGATACAACTTTGTTAGCTACGGCTAAAAGCAATAAATTTCAAGACTGGGGAGCGATTGCCCAAGCAGTAGGTGAACGGTCGGATTATCAATGCTTTGTGAGGTTCCAGACCACATTGCGTTATCAAGTCGGTTCGGCATCCAAGTGGAGCAAGAAAGACGATGATCGCTTAAAGTCTGTTGTGCTTCAAAATACCACAAATAGCATCATTGATTGGAAAAGCGTTATGCAATATTTTCCAGACAAATGCAAGTCATCCGTAATTGGCCGTTATACATATGTGCTTCATCCAAGCATCAGTCGTGATCCCTTTACGGTGGAGGAGGATATGAAACTTTTTGCCGCAGTAAAAGAGTTTGATGGAAAGTTCTATAACTTTCCACGTGATCTATTTCCCAATCGTTCATTAAGCCAACTACGCATGCGCTATTATAATGTTTTGGCACAGCGCGATAAGACTGATTCATGGTCTGTAGATGATGACAGTAAACTAATGGAATTTGTCACCAATCACGGAAAAAAAGATTGGGTCGGCTGCGCCAGATTTTTAGGAAACCATACGCGCACCAGTTGCCGCACAAGATTTGTAACTATTACACGATTTTTTGAGCAAAATCCCGGTGCAGATTTGAAAGACTTACCGCGGCGTCAAAAATTGAAGCATGCACCAGTTACAGAAAAAAACTGGACGCAATGTTTGGAAAAATGGCAGGAGGATCCAAGCTCTTTGGAATTTGAAGAAGAATCAAAAAAATGTAATACTATTAAAAAAGCACTTGCTCTAGAGTATCAAGAGCCGTGGTCGCTGCGGGATGACACAAAGCTCATGGAATTTGTCACAACCAATGGCACACTTGAATGGGCGAAGTGCGCCATGTATATAGGAAACAAGACAAAACACAACTGTCGTTCAAGATACTACTATATTAAACGATTTCTGGCCAAAAATCCCAATGCAAATGTCGAAGAATTTCCAAGGCAAAGCACAAAAAAAATTGTTAAACTTATTGGTCAAGATAAACAGGCCTATCATTACTTGAAATATGCCTACAATTTGCAATTGGGCCAGAACAATACACCTGAATTTGCTATGCCCAGCAACGATTTAAATCTACGTTTGGCCGTGCAGGCCTTGAGACCACAACTAGCTGTCAATCTGGGAAACTTGGTAAAAATCCCTATGCTGCCCAGTCAAATATGCCAAGTCTATAGTCAAATGTTAAAAACATTGCAGCCAGTTGATTACCAGCCGTATCTACTGCCCCCCAATTGGTCCACAATAATGGGCTTCCGCGCCTTATGTATCTTGCCTCCAGATCTTCGCAATGGAAAAAAGCAAGAAATACTGAATTATGACACATCAGCGGATGCAGTGCTGATATTTCGTCAGCGGCTTCGTGCGCTTTTCTATCGCACCACTTTGCTGAGCCGCCTGGATCCGGAGTTGATTGAAAATTTTCGAGATGCGTTGCCACCGGCCGAAGCAACATCAGAGAATTATGTACATTCCCATGTAGTGCCGTTTGAGCAGGTTGTAGATAAACAGGCATGCGTGGAAGCTATAGCGCTTAATCAGCTGAAATTCGGAAATCAATTGTGCGATGTAATCAGTAATCAGAAAACAGAGCCGCAAAGCGAAGATGAAGAAAACGTTCCGAATATTAAGGAGGAACAGTTTTAG
- Protein Sequence
- MTTNSFEQLKEIIQQQLIEIAEALKVTTAEASAASALRINQTLQRNLERSYTNVLQLLKTVRARYALNSEIIKQRLCVSRVKTDERISKTGAWLNGGSYRFKGNLYFRDASGRSCPNNDDYERRSHTEMFPTDFDMRSKHVWTMFDKKNVVMGVKQQLLDHVNLKQQSQPKSRKRNAIDLHTKSLASLLDSVDSSFRIDWQQLSSMEIQCRHSSYSCEAMWEVYLHPRINRSAWTLDEDTTLLATAKSNKFQDWGAIAQAVGERSDYQCFVRFQTTLRYQVGSASKWSKKDDDRLKSVVLQNTTNSIIDWKSVMQYFPDKCKSSVIGRYTYVLHPSISRDPFTVEEDMKLFAAVKEFDGKFYNFPRDLFPNRSLSQLRMRYYNVLAQRDKTDSWSVDDDSKLMEFVTNHGKKDWVGCARFLGNHTRTSCRTRFVTITRFFEQNPGADLKDLPRRQKLKHAPVTEKNWTQCLEKWQEDPSSLEFEEESKKCNTIKKALALEYQEPWSLRDDTKLMEFVTTNGTLEWAKCAMYIGNKTKHNCRSRYYYIKRFLAKNPNANVEEFPRQSTKKIVKLIGQDKQAYHYLKYAYNLQLGQNNTPEFAMPSNDLNLRLAVQALRPQLAVNLGNLVKIPMLPSQICQVYSQMLKTLQPVDYQPYLLPPNWSTIMGFRALCILPPDLRNGKKQEILNYDTSADAVLIFRQRLRALFYRTTLLSRLDPELIENFRDALPPAEATSENYVHSHVVPFEQVVDKQACVEAIALNQLKFGNQLCDVISNQKTEPQSEDEENVPNIKEEQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338263;
- 90% Identity
- iTF_00338263;
- 80% Identity
- -