Ccos013137.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chymomyza costata
Gene Symbol
ct
Assembly
GCA_018150985.1
Location
JAECWU010000127.1:20474548-20531120[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.4e-27 5e-23 81.0 0.0 3 72 675 745 673 750 0.95
2 3 5.3e-32 5e-28 97.0 0.0 3 77 1141 1216 1139 1218 0.96
3 3 3.3e-31 3.1e-27 94.5 0.0 3 76 1406 1480 1404 1483 0.96

Sequence Information

Coding Sequence
ATGCCTAACGCAAGCGTATTTCATAAAAACGATGGCAATGACGACGCTGTTGATGATTATGATGATGATGTTGACGAGCCGCCAGTTGTCTGGCATTTAAACGTTGCAGCCGCAATCACGTTGCACCAGAACGGCGGTAATCTGCTTGCAACCAATACACCCTCACCATCGCCGCCATTGCTCAGCGCCGAGCAGCAGCAGCAGTTGCAGAGCAGCTTGCAGAACGAGATTAAAACACTTTTGGAGGAGTTGCAACGCCTGCGTGCATCAGAACAAACTCATCTAATACACATCCAACGCCTTGAGAAGCACATAGAGGTTAAGCGTCAGCACATAATGCGTCTCGAGGCGCGTTTGGATAAGCAACAAATAAATGAGGCACTGGCTGAGGCTACCGCCTTGGCGGCCACAACTGTTGCAGCTGCCACAAATAACAACAACAACTGCAGCAACAGCAACGACAACAACAACGTTGTCGATGTCACACATGAGGCTATCAATGATTTGGCAGTTGTTACCAAATTGTCTGAGCGATTGCCTGCCACAGATGAGCAGCACAGCACAAATGAGGAAGAAGATGCGGCCGATGAGGATGCTGAGGAGGCCGAGCAGCTGTCAACCGAGACTGCTGATATGTTGCATGCCAACAACACAATGGAAACTGACGAGTTGAAAATCAAAAAGGAGCAACACAGTCCATTGGATCTGAATGTGCTCAGTCCACAGTCGGCCATAGCCGCCGCAGCGGCTGCTGCGGCAGCTGCCGCCTGCGCCAATGATCCGAACAAATTCCAGGCTTTATTGATAGAACGCACCAAGGCACTGGCCGCTGAGGCGCTCAAGAATGGAGCCAGTGAAGCGTCGGCTAAAGATGATGATGAAGATGATGAGCTAGAAGATGCTGAGCTCGAAAAGCCGCTAACGCTGGAAGAGCAGCTGGTCAACAGCTATTGGCGACGCGGCTTTGAAGCCAGCGCAGCAACAGTAGCGAGCAAAACGCCAACAATTTATCAAAATGCCAATTTGCCACAGCAACAACAACAACAACAACACCCAGCCGTCCAGCTGCTGCCACCTCCACCGCCGCCGCCACCACCCCCCATGAGCCACTATGCCGCTCAGCAACAACAACAACAACAACACTATCAACAACAGCAACATGGACCCTCGTCCACAGCGCTGCTTAGTCAATTGGTTAACTCAACTTTCTCACACGCTTCTTCTTCTACTCCCTCCTCCTCCTCCACCAACTCTTCTTCCAATTCCAAAATTCCTTTACCGCTGCGTCCAGATGGTAATCCACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTCTAATACCGATTTAGAGCACAAACCTGCCGCCGGCGCTCTGGCACTCAACCATCACCAGCATCATCATCATGGACATGGCCTGGGCAGTCATCATGCGCATCATCTGCACGATGGCTCGAACAGCTCCAGCGCCAGCACGCCTAATGCATCTGCCGGTGGTACTGCCGCTGCACAGCTGGCAGCCAGCATTGCCTCTCAGCTAAATGGCAGCAAATCCTTGCTACAAGCCGCTGCCGCCGCCAATGCTGCAGCCAATGCCGTGGCCGAGGATAACAACAATAGCTTGACGCCCAATGCAAATGCAGCTGCCGCTGCAGCGGCCATGGCTGCACATGCGCAGCATGCTCATGCCGCAGCGGCCTTGGGTGCGCCCGGTTTCTTGCCAGGATTGCCAGCGTTTCAGTTTGCCGCCGCTGCGGCCGCTGGACAAGAACAGCGCGCACATTATCGTTTTGCCGATGCTGAGCTGCAGCTGCCACCGGGCGCTTCGATGGCCGGACGTTTGGGTGAGTCGCTAATACCCAAGGGCGATCCCATGGAGGCCAAGCTGCAGGAAATGTTACGTTACAATATGGATAAGTATGCCAATCAGGCGCTGGATACGCTGCATATATCGCGTCGTGTGCGAGAGCTCTTGTCCGTGCATAACATTGGACAGCGTTTGTTTGCCAAGTACATACTGGGCCTGTCGCAGGGCACTGTATCGGAGCTATTAAGCAAGCCGAAGCCCTGGGATAAGCTAACCGAGAAGGGACGTGACAGCTATCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCGGTTATGCTGCTCAAATCGCTAATACCCAAGAAAGATTCTGGCCTGCCACAATATGCTGGACGCGGCGGTGGCGATGATTCCATGTCTGAGGATCGTATTGCACATATACTCAGCGAGGCCTCGTCACTGATGAAGAGCAATGCCGTGCAGGAGCATCAGCGACGCGCCTCCGCTCATGGCGATGATACACATAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAAGATCTGGCACAGGATAAGATGGCGCGTCTGTATCAGGAGATAATGGCGCGTACGCCCAGAGAGGCCGCTTTTCCTAGCTTCCTGCTGTCACCGTTCTTTGGTGGCGCCGCCGGCATGCCCAGTGCCGCCAATGCATTCCCCGCCGCCATGGCAGCCGATGAGAACATGCGTCATGCCTTTGAGCGTGAGATTGCCAAGTTGCAGCAGCAACAACAACAACAGCATCAGGCCGCCAGTTTTCCAAATTTCTCCAGCCTTATGGCACTACAGCAACAGGTGCTCAATGGCGCACAGGATCTCTCGCTAGCCAGCGGCAAAGACATGCTCAAGGATATCAAAGTGAATGGCCAACGCGGCTCACTCGATCACTCTCAGAGCTCCAAGGATGGCGAACGTGATGATGAACGCAGTTTAGATCGTGAGCGTCATAGTGCAGGCGCAGCAGCTGCGCCAGGCAGCAACAGAAGCAGCTCCGGCTTTGGTTTGCATGGCTGCAAATCAGAGAGTGGCGCTAGTGTAGGTACAGCTGGTGGTGGCACTCCTGCACCACCGGCACCACCCAGTAGCAATGCCTCGGCACAGCATACCAGCAATTCGGCAGCGCCCAGTCCATTGAGTAACTCCATACTGCCGCCGGCTTTAAGCCAGGGCGATGAGTTTGCAGCCACCGCGAGTCCTTTGCAGCGCATGGCTTCCATAACAAACTCTTTGATCACACAACCACCAGTAACGCCACATCATTCGACGCCACAGCGGCCCACCAAGGCGGTGCTGCCGCCCATCACCCAGCAGCAGTTTGACATGTTCAACAATCTCAATACCGAGGATATTGTGCGTCGCGTCAAGGAAGCATTGTCCCAATATAGCATTTCCCAGCGTCTCTTTGGTGAATCTGTGCTGGGCCTGTCACAGGGATCAGTATCTGATTTGCTGGCACGACCCAAGCCCTGGCACATGCTCACCCAAAAGGGTCGTGAGCCCTTCATACGCATGAAGATGTTCCTGGAGGATGAGAACGCCGTGCACAAGCTGGTGGCCAGCCAGTACAAGATTGCGCCCGAGAAGCTTATGCGCACGGGCAGCTATAGCGGCAGTCCACAGATACCACAAGGTTTGGCCAACAAAATGCAAGCGGCACTTCCCATGCAAAAGATGATGAACGAGCTGAAACTACAGGAGCCTGCTCAGGCGCAACACATCATGCAACAAATGCAGGCCGCAGCTGCCATGTCTGCGGCGATGCAGCAGCAACAAGCTGCCGCCGCTGCAGCCCAGCAACAAAGCCAACACCAGCAACATGCCGCAGCGCAAGCTGCCGCCGCTGCAGCAGCCGCCGGACTGCATCATCAAAATATGCTGCTTACCTCGCCAGGATTGCCGCCACAGCACGCTATAAGCTTGCCAGCAGCCACGGGCGGTAGCAGCGCAAGTGGCGGCGTGGGTGTTCCTGGAACGCCTGTGACGCCTGTAAGTGCGGCAGCAATCTCCGGCCCCGACAAAAAGCCCATGATGATGCCAGTGCATGGCGCGCATGCACCCAATGCCATGCGCAGCTTGCATCAGCATATGTCGCCCACCGTCTATGAGATGGCTGCGCTGACGCAGGATTTGGATACACACGACATTACCACCAAGATCAAGGAGGCGCTGCTGGCCAATAACATAGGCCAGAAGATATTCGGCGAGGCAGTGTTGGGCCTATCGCAGGGCTCAGTGTCTGAGCTGCTGAGCAAGCCCAAGCCCTGGCATATGCTCTCCATCAAAGGACGCGAGCCGTTCATACGCATGCAGCTCTGGTTGAGTGATGCCAATAATGTGGAGCGACTGCAAGTGATTAAGAACGAGCGCCGGGAGGCCAGCAAGCGACGACGCTCAACGGGTCCAAATCAGCAGGACAACAGCTCGGATACGTCGAGCAATGACACCAACGACTTTTACACCAGCAGCCCGGGACCTGGTTCAGTGGGCTCATCGGTTGGCGGCGCGCCGCCAAATAAGAAACAGCGTGTGCTCTTCTCAGAGGAGCAAAAAGAAGCTTTGCGTCTGGCTTTTGCCTTGGATCCTTATCCAAATGTGGGCACCATAGAGTTTTTGGCCAATGAGCTGGGCCTGGCCACACGCACCATAACCAACTGGTTTCACAATCATCGCATGCGCTTAAAGCAGCAGGTGCCACATGGTCAGCCGGGCATTGATAATCCCATACCCAGCCGCGAGAATACCAATGCCACGCCTTTTGATCCCGTCCAGTTTCGCATACTGCTGCAGCAGCGTTTGGTCGAGCTGCACAAGGAGCGCATGGGCCTAAGTGGTGCGCCTCTACCTTACCCACCTTACTTTGCAGCCGCAGCGCTGCTGGGACGCAGCTTGGCGGGCATGCCCGGTGCTGCAGCAGCCGCTGGTGCCGCAGCTGCTGCCGCGGCAGCTGCAGCTGGCGCTGCGGGCGAGAACGAGCTACAGGCCTTAAATCAGGCTTTCAAAGAGCAAATGAGCGGCCTGGACTTGTCCATGTCTACGCTAAAGCGTGAGCGCACCGATGACTATCAAGATGAGCTGGATATGGATGCCAGCGCGCATCATATGAGCGACAATGAGTCACTGGATGATGATAAATCCTCCAATCTGAACTCAGACTATGAGAAGGCCATGCAAAAATCAGCACTAGCCTCAGCTGCTGCCTATATGAGCAATGCTGTGCGCAGCTCACGTCGCAAGCCCGCGGCGCCGCAATGGGTTAATCCTGCAGGCGCTGGCACGCCCAGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTGCGTTATGCAGCCCTCGGATTATGGACGCGATGAGGCGGAGGGCAAGTCAACGGGCGCAGGCAGTGAGGCGGCAAACAGCGAGAGCGGTGAGCATGAGCATGCGCACTTGGACTTGGATCAGAGCTTCATGGAGCCCGAGGTGCACATCAAGCAGGAGGAAGACGATGAGGAAGAAGAGTTGAACAATGAGTGCGGCGCCAATGATGCCGCAACAGCGGAAGAGAAGAAACTCAAGGTGATCAACGAGGACAAGCTGCGTCTGGTGCGCGTGCGTCGTCTGAGCAGCAATGGAGCCTCAGCCAATCCAGCCGAACTGGAAGAGAGCTGTGCGCCAGCGCAGCAGCAGACAGCGAGCGCAGCGCCTGCGCCAGCAGCTGCCTGGAACTATTAA
Protein Sequence
MPNASVFHKNDGNDDAVDDYDDDVDEPPVVWHLNVAAAITLHQNGGNLLATNTPSPSPPLLSAEQQQQLQSSLQNEIKTLLEELQRLRASEQTHLIHIQRLEKHIEVKRQHIMRLEARLDKQQINEALAEATALAATTVAAATNNNNNCSNSNDNNNVVDVTHEAINDLAVVTKLSERLPATDEQHSTNEEEDAADEDAEEAEQLSTETADMLHANNTMETDELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLIERTKALAAEALKNGASEASAKDDDEDDELEDAELEKPLTLEEQLVNSYWRRGFEASAATVASKTPTIYQNANLPQQQQQQQHPAVQLLPPPPPPPPPPMSHYAAQQQQQQQHYQQQQHGPSSTALLSQLVNSTFSHASSSTPSSSSTNSSSNSKIPLPLRPDGNPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSNTDLEHKPAAGALALNHHQHHHHGHGLGSHHAHHLHDGSNSSSASTPNASAGGTAAAQLAASIASQLNGSKSLLQAAAAANAAANAVAEDNNNSLTPNANAAAAAAAMAAHAQHAHAAAALGAPGFLPGLPAFQFAAAAAAGQEQRAHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGGGDDSMSEDRIAHILSEASSLMKSNAVQEHQRRASAHGDDTHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLAQDKMARLYQEIMARTPREAAFPSFLLSPFFGGAAGMPSAANAFPAAMAADENMRHAFEREIAKLQQQQQQQHQAASFPNFSSLMALQQQVLNGAQDLSLASGKDMLKDIKVNGQRGSLDHSQSSKDGERDDERSLDRERHSAGAAAAPGSNRSSSGFGLHGCKSESGASVGTAGGGTPAPPAPPSSNASAQHTSNSAAPSPLSNSILPPALSQGDEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMQAALPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAAAQQQSQHQQHAAAQAAAAAAAAGLHHQNMLLTSPGLPPQHAISLPAATGGSSASGGVGVPGTPVTPVSAAAISGPDKKPMMMPVHGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVIKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGIDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPLPYPPYFAAAALLGRSLAGMPGAAAAAGAAAAAAAAAAGAAGENELQALNQAFKEQMSGLDLSMSTLKRERTDDYQDELDMDASAHHMSDNESLDDDKSSNLNSDYEKAMQKSALASAAAYMSNAVRSSRRKPAAPQWVNPAGAGTPSGXXXXXXXXXXXXXXXXXXXXXXXXXXVCVMQPSDYGRDEAEGKSTGAGSEAANSESGEHEHAHLDLDQSFMEPEVHIKQEEDDEEEELNNECGANDAATAEEKKLKVINEDKLRLVRVRRLSSNGASANPAELEESCAPAQQQTASAAPAPAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00338226;
90% Identity
iTF_00337411;
80% Identity
iTF_00337411;