Ccos006349.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- UBP1
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000379.1:18822643-18843681[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-52 1.5e-48 165.1 0.1 23 182 379 535 362 543 0.92 2 2 4.6e-11 4.3e-07 29.5 1.4 194 222 616 644 607 645 0.91
Sequence Information
- Coding Sequence
- ATGGAGCTTACCTTTCTATCGCAAAATTCCGGTCTCTTGGATTTACAAAGCATATTTGATCCACAATATACATTGCAACAACAACAACAACAACATCAGCAACTTCATCAAACGCAGTCAACGCCGCGTACAACAACGAAATTTGATTTAAACATCTTTACCGATTTCGACCAAATGGAATTCAGCAGTACTTTGAACAGAAATCATCAATATCTGAATAATAATAATAACAACAACAACAATAACAACATACATACACAACAAACAAGCGGTGGTAATATTAATCAGATCCAAAATCGTCATTTTATCAGCGGCTATCATCATCAACATATTGGATCGGATTATGAGCAAGTGATTAATTTTGTAGACTCACCACCGAATTCAGAGGAATCTTGGAACGACGCACAATCGAAGGATTCACCTGGACCACAGATAATCGACGTACAGACCATTTACACAGGCAGTGGCTCACGCAAAAGACGAATGGATTGGGACTCTTTGGATATTGGTCAAAGTGAAAATTCACCGACATCGCAAACTGGCGAGTTACCCAATAAGGTGGCACATCAGGAGAAAGATAAACATAAGCGCGAGAAGCATTCAGGTCGCAGCAGCTGGAGCGATGATATTGGATTCGATTTGAATGCTGAATTTAATAGCAACTCCTATTTGAACAATGAAAACTTTTTATCCTTCTCACCTGGCCTGACGGCACTCAAACAAGAGCCGCAACCCGAGCAGCTCAAACCACATCCGAAGATACCCTTGGACATAGGCAAGTTAGCCAAGTCACCGCACGGCAGCGAAACAAACAATTCTCCGAAGCACGCTATAGCAGAGGCAAGTGCAGCAATAACAACTGGCAGCGGTAATCCCAAGAAGCATGAGTTGAACCCAGGCACGGTATGCGGCTGTGGTTCACCGCAAGGTTCACCCGCCGCTACGGAATTTGAATTGAATGGTAATGCCAATGGAAATGGTAATGCCAATGCAGCCGAGCAGACAGCTAATGGCAATAGCGCTACGGGCAATGAGTCCTTTATTCTGACGCCACGCGCTGGTGCTGCTCTACAGCAGCTCAATGTGGTTGATGCGGCCAAGATAGAAAATAATGCTGGCGGAGGAAGCACTACAGTGCATTCCGAAGATCACAAGTTCCAGTATATCTTGGCAGCGGCCACGTCAATTGCTACCAAGAACAATGAGGAGACTTTGACCTATCTGAATCAGGGTCAAAGCTATGAGATCAAATTGAAAAAAATTGGCGATTTATCTTTCTATCGCGATAAGATTTTGAAGAGTGTCATCAAGATTTGCTTTCATGAGCGTCGTCTGCAGTTTATGGAGCGTGAACAGATGCAACAATGGCAGGCCTCGCGTCCGGGTGAGCGCATTATTGAAGTGGATGTGCCGCTATCGTATGGATTGTGTCATGTGTCGCAGCCATTGAATTCGAATTCATTGAATACTGTTGAAATATTTTGGGATCCATTGAAGGAGGTCGGTGTTTATATCAAGGTTAATTGCATTTCAACCGAATTTACACCAAAGAAGCACGGTGGAGAAAAGGGTGTACCATTTCGTCTACAAATTGAAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCCAGATTAAGGTTTTCAAGCTAAAAGGCGCCGATCGCAAGCATAAGCAAGATCGCGAAAAGATACAAAAGCGTCCACAATCTGAGCAGGACAAATTTCAGCCCAGCTACGAATGCACTATCATGAATGATATATCATTGGATTTGATTGCGCCCACCACAAGCGGTTGCTACAGTCCCGAGTACATGAAAATTTGGCCAAATTCGCCAGTGCATATACCGAAATATGATGGCATACTACCATTTACAAGCGCATCACCAGCAGCTAGCAGCAGCCCGATAGCAATCAATTCTGTGACATCAACAAATTCGCCTACACTTAAGCTCATGGATGCCACAAGCATGGTGTCGCCGCAGCATGTGCCAGCGGATATTGAAGACTATAATCAGAATATAATGCCGGAATCGACGCCCGCTCAAGTGACGCAGTGGCTAACAAATCATCGTTTGACAGCCTATCTGACAACATTTGCGCATTTCTCGGGCGCGGATATAATGCGCATGTCCAAGGAGGATCTAATGCAGATTTGTGGTCTAGCCGATGGCATACGCATGTACAATATCTTGCGTGCCAAAACCATTGCGCCACGCCTAACGCTCTATGCCAGCTTGGATGGCTGCAGCTACAATGCCATTTACTTGCTAGCAAATACGGCCAAGGAGCTGCAACAAAAGCTCTTCAAATTGCCTGGTTTTTATGACTTTATGGCCAAGAGCGCCAGCAATGGTGTTTTGGAGAATGGTCTGGCCAATGCTAACTCTGGCGGCGCCTTGTACAACAACTGGGGCCTACATTCTAAATATTCGGGCAGTGGTTCCAACATTTTCAATGATGTCAACAAAAGCTGCGTTTATATTGCCGGACCTGCCGGCGTGCACGTTACTGTTACCGATGAAGTACTCAATAATGAAATTAAGGATGGCAGCTTGTATGCGTTAGATGTGCAAAGCGGCAAAGTCATTTTAAAATTGGTCAACAAAACAGATAATTAA
- Protein Sequence
- MELTFLSQNSGLLDLQSIFDPQYTLQQQQQQHQQLHQTQSTPRTTTKFDLNIFTDFDQMEFSSTLNRNHQYLNNNNNNNNNNNIHTQQTSGGNINQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWNDAQSKDSPGPQIIDVQTIYTGSGSRKRRMDWDSLDIGQSENSPTSQTGELPNKVAHQEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPGLTALKQEPQPEQLKPHPKIPLDIGKLAKSPHGSETNNSPKHAIAEASAAITTGSGNPKKHELNPGTVCGCGSPQGSPAATEFELNGNANGNGNANAAEQTANGNSATGNESFILTPRAGAALQQLNVVDAAKIENNAGGGSTTVHSEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGERIIEVDVPLSYGLCHVSQPLNSNSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLIAPTTSGCYSPEYMKIWPNSPVHIPKYDGILPFTSASPAASSSPIAINSVTSTNSPTLKLMDATSMVSPQHVPADIEDYNQNIMPESTPAQVTQWLTNHRLTAYLTTFAHFSGADIMRMSKEDLMQICGLADGIRMYNILRAKTIAPRLTLYASLDGCSYNAIYLLANTAKELQQKLFKLPGFYDFMAKSASNGVLENGLANANSGGALYNNWGLHSKYSGSGSNIFNDVNKSCVYIAGPAGVHVTVTDEVLNNEIKDGSLYALDVQSGKVILKLVNKTDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338091;
- 90% Identity
- -
- 80% Identity
- -