Ccos005258.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- Xbp1
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000379.1:13059715-13061330[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-13 1.7e-10 40.8 20.7 2 65 85 148 85 169 0.90 2 2 5.1 5e+03 -2.4 0.4 43 60 314 331 308 335 0.56
Sequence Information
- Coding Sequence
- ATGGCACCCCCAGCAAACACGGTTATAATAACAATGCCCAAGTGTGTGGCACTTACAGGCAATACGTTGCCCAAGCTGCGACCAGCTCCAGCAGCAGCGCTGCTTAAGGGCTTAGGCGCAGCTTCGCCCGCATCCAGTTCCGGCTATGCTTCATCAAGCAACAGCGTCGTAGACGATGACTGCGTCGATATGGACATGCCCACAAGCACACCACCAAAAGCCAAAAAGCGTCGTTTGGATCATCTGACCTGGGAAGAGAAAGTGCAAAGAAAAAAACTAAAGAACCGAGTTGCGGCACAAACATCACGGGATCGCAAAAAAGCGCGCATGGAAGAGATGGAATATGAAATCAAAGAGTTGACAGACAAACAAGAAATACTACAAAACAAATGTGAGAGTCTGCAGGCCATCAATGACTCACTACTTGCCAAAAATCATAAACTTGATACGGAATTGGAACTATTACGCCAAGAACTCGCAGAAATTAAACAAAACACCCTTAACCACAGCAGCAAGAGCAGCAGCAGCAGCAACAGCAATGCCGCCAATGCCAGAGCTGATGGCTCAGGGTACAATGGACACACAGTCGTCAGCTCTTGCCTTGACGACAAAACAGTTACAGCAGCAGCTGAAAAAGAGCAGCACAGCAGCCTCGCTATGGAGGATTGTGGCGCTTTGCCTTCTCTACAAGACATACTGCTCGTCGACGACGAAGAATTCGATGCCCGGCGACTTGAAGAGCTGGCCGAAAGTCTACTCGCAGATATCACAGCAGACTTGGAAACAAGCACTAGAACATGCTGCGAAACTGTTGCCAAAGATGCAGGCAACACAAAGCGATTGTCTGGATCAGTGGTGGGGACCACAGCAGAGTGCGTGGAATCCAACGGGCATAAAGCTAATGGCCTAGATACAATAGCAAACACAGCGAAATCCCTTGAATTACAAACAAACAACAGCAGCCTGAATTTTCAGGTGTTACAACTAAATGGAAACCTACAAAATGCCTCAAATGCTACAACAGTAACAACTACAACGTGCACAACACAAGCTACACCGGACACTGTGTATGGCACCTATGATGCTAAAACAAATTCAATTACTATAGTGATGGACGGTGATACAATGCCGGTTAACGAGGCAGTCGAGGAGATTTACAGTGAGGGTGAAGCCGCTGGTGAAGACACTACAGATGCTATCATGAAATGTCCAGCACCGGCGGCATCCCCCTCACAGGTCTATTTAAATGTAATCAATGCCACCGATGACTCGGACGATGACTTTGATACATTTGAAAAGTTTCTACGTATCAAACCACACTCTCCGCTGGCAAAATCACCCGCGTTATCACTACACTCGGCCACATCGGATCATGGGTACGAGTCTATTTTGGGCTCTCCAACGTCCACAACGCTCTCACATTTTAATAATGCTCTGCCCATGGAGGATGATGAATTTCCCTGGCAAAGTAATTTTGATGAACTCTTTCCCAGTTTAATTTAA
- Protein Sequence
- MAPPANTVIITMPKCVALTGNTLPKLRPAPAAALLKGLGAASPASSSGYASSSNSVVDDDCVDMDMPTSTPPKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKQEILQNKCESLQAINDSLLAKNHKLDTELELLRQELAEIKQNTLNHSSKSSSSSNSNAANARADGSGYNGHTVVSSCLDDKTVTAAAEKEQHSSLAMEDCGALPSLQDILLVDDEEFDARRLEELAESLLADITADLETSTRTCCETVAKDAGNTKRLSGSVVGTTAECVESNGHKANGLDTIANTAKSLELQTNNSSLNFQVLQLNGNLQNASNATTVTTTTCTTQATPDTVYGTYDAKTNSITIVMDGDTMPVNEAVEEIYSEGEAAGEDTTDAIMKCPAPAASPSQVYLNVINATDDSDDDFDTFEKFLRIKPHSPLAKSPALSLHSATSDHGYESILGSPTSTTLSHFNNALPMEDDEFPWQSNFDELFPSLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338076;
- 90% Identity
- iTF_00338076;
- 80% Identity
- -