Ccos007559.1
Basic Information
- Insect
- Chymomyza costata
- Gene Symbol
- cnc
- Assembly
- GCA_018150985.1
- Location
- JAECWU010000002.1:11925570-11929770[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-18 1e-15 57.5 5.8 3 63 350 410 348 412 0.95
Sequence Information
- Coding Sequence
- ATGGTGGACAACAGCACCAGCAACAACTCTTCGGTACTGGGTTTGCCCAGCAGTGGACATGGTAGTAATACTGGCAGCACAGCAGGTCCTATTATACCAGGTGGCAGTGCTAATCACGCCAGTGGCGGTGCTTCTGTTACAGGACTCTCTATGAACGGTGCAGCCGCTGGTGCTGCAGCGGGCATGACTGCTGATTTATTGGCTAGCGGTGGCGGCGCTCAAGGTGGCGGTGCCGATCGTTTGGACGCTTCTAGTGACAGTGCCGTCAGTTCCATGGGCTCGGAACGTGTGCCATCGTTGTCGGATGGCGAATGGGGTGAGGGCAGTGATTCGGCACAGGATTATCATCATGGCAAATATGGTGGACCCTATGATTATAGCTACAATAATACCGCACGCATTAGCACGGCCACACGCCAGCCACCGGTTGCTCAAAAGAAGCATCAGCTTTATGGCAAACGCGATCCACACAAGCAATCGCCCAATGCCTTGCGCAGCGCAGCCCCACCAGCTGTTGCACCAGCAGCTTTGCCTGCAGCCGCAGCCAGCGCTGTTCAATGTCAAACTCCGCAAGCACAAACTATTAAATACGAGTATGACGGCGGCTATGGTAATATGAGCAGCAGTGCTAGTCTGCAACATAATGGCAACGAGGCAGGCGCCATGGGTCCTGCACTCTCCAAGGAGTATGAGCATCATCAGCCCTATGGCATGGGCGCTAGCAGTGGTTATTCAGTGGACTTTACCGTGCGTCCGCCGCGCAATCCTCAGGAGGTGGTGCAGCATAATCATACTTACACTTTGCCTCAGGGCACTGGCTCGCTACCTAGACCACAAGCACGCGACAAGAAGATGATCAGTGGACCTAAGCATGGATCGAAGAGTTCCCGAGAAAGTCTCAGTGAGGAGGAGCATCTGACGCGCGATGAGAAGCGTGCACGTGCTTTGAATATACCCATACTAGTGTGTGACATCATTAACTTGCCCATGGATGAGTTCAATGAGCGTTTGTCCAAATATGATCTGAGCGAGAATCAGTTGTCTTTGATACGGGATATACGCCGTCGTGGCAAGAACAAGGTAGCCGCACAAAATTGTCGCAAACGTAAGCTGGATCAAATATTGACGCTGGAAGATGAGGTCAATGCGGTGGTGAAACGCAAGAATCATTTGACTAGTGAACGTGAAAGCTTGGAGAATGAGCGCAAACGTATTTCCAACAAGTTTACCATACTACATCGCCATGTGTTCCAGTATCTGCGTGATCCCGAGGGTAATCCCTGCTCGCCCAGCGACTACAGCTTGCAACAGGCTGCCGATGGTTCTGTTTATTTGTTGCCTCGCGACAAATCGGATAGTAATAGCACTGCAACTTCGGCCTCCAGCGCAGCCTCGGGTGGTGGCGCTAGCGGCAACCTCAATGGACACAGTCACAATGGCGCTGTGCAGGCACAGAGCTCCTTGCACACTATGCTAACCGCATTAACAAAGCCAGGCTTAAAGCTTGTTTTCACAGTTATGCAGCACACTGTATCTGAGCTCGAGTTCCTACTGCCCCCCAGCACGATTTTGTGA
- Protein Sequence
- MVDNSTSNNSSVLGLPSSGHGSNTGSTAGPIIPGGSANHASGGASVTGLSMNGAAAGAAAGMTADLLASGGGAQGGGADRLDASSDSAVSSMGSERVPSLSDGEWGEGSDSAQDYHHGKYGGPYDYSYNNTARISTATRQPPVAQKKHQLYGKRDPHKQSPNALRSAAPPAVAPAALPAAAASAVQCQTPQAQTIKYEYDGGYGNMSSSASLQHNGNEAGAMGPALSKEYEHHQPYGMGASSGYSVDFTVRPPRNPQEVVQHNHTYTLPQGTGSLPRPQARDKKMISGPKHGSKSSRESLSEEEHLTRDEKRARALNIPILVCDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILTLEDEVNAVVKRKNHLTSERESLENERKRISNKFTILHRHVFQYLRDPEGNPCSPSDYSLQQAADGSVYLLPRDKSDSNSTATSASSAASGGGASGNLNGHSHNGAVQAQSSLHTMLTALTKPGLKLVFTVMQHTVSELEFLLPPSTIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338883; iTF_00338068; iTF_00335606;
- 90% Identity
- iTF_00338068; iTF_00335606;
- 80% Identity
- -