Ccau001236.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- elt-1
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000030.1:823581-827532[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7 4.7e+03 -2.6 2.5 4 26 436 455 435 458 0.63 2 2 3.2e-17 5.5e-14 51.6 8.6 1 35 489 522 489 523 0.97
Sequence Information
- Coding Sequence
- ATGGAACCGCAGACaacgcagcaacagcagcagcaacaacagcaacaacaacaactgcagcaactgcaacaacaagtgcttagcaaacaacaattacaattgGTAGACAAGATTAAAAGCGAAtcgaacagcaacaacgccGAGCCACTAACTCAGCAAACGCCTAGCGGTGGCACTCCTACCTCCGCATTAGAGGAGCAGCAAGTtcaggagcaacaacaacagcagcaatcaGCCACAACAGTTGGAGTAGTAGTCCAAACTACTCAGAGTGGCATTGGCGAAACGGAGGAGCAACATCAGCATCATCAACCGCAATACGTTGTTATCCAACGCCCACAACAGCGACGCATATTGACGACGGCGGGCACACTCGAGCTCAACGAACCACGAGATAGTGACCCTGGTGCGACTGTCTCCAGCAGTACAAGCATCTCTGGTTCGGCAGTCGACGCTCACGGTGATTACCAACGCAATCAACACTCGTCACCTACACACTATGTACAATTGGCACCACGAAGCTCTGAGGAGACGCCTGGTACACTGTACACCAGCTATCCAACGGGTCAGATTATATGCACAGCCGACGATGGGGCACCTATCAAAATCGAGACCATTGACAAAAGTGAAGTATCTGGTGACGCtcaacagctgcaacatcaacaacaacaacagcagcatcaaTGTCCCACGCCTAACAGCAGCTATGCGGAGTCAATTGTGGTCACAGGAAATCCCCAACTGCAGTCTCATCCCCATGCCCATGCAATGCCCCATAGCACCCATGGCACAGTGCGATTTGTAAGCGAAGATGGCGCCCGTTTTACCAGCTCAAGCGCAGATAATGATGCACCCGGCACCAATCTTTATTACGATGCATCAGTAATCGACGCCACCGTGCATGCAAATGAGTCTAAGACCTACGCAGATCTGGGTAATGCCTATGCGTTTCCGGCCAATGCCACTTTTGCCACAAGCAATGCATATTCGGCCACGGGAAATACCATCTATAGTGTGCCAGCAGCGAATTTAAACTCGTTGCGTCAAACAACCGCGGGTCCCTATCAGACGATATCTTTTTTGGAAAGTGGAACTCCCAACGATCCGCCGCTTTGGTCCAATGCTGCGGAGTATCAAAATGTATCTTACTCCAACTATCACTCGCAGGTGATCGATGAGTATCAGCCTAGCAATATGACTCCTGCGCACTGGACCTCAGCACCGAATATTGGGAACTATGAAGCCACATTGGCTGCCACGACAGGTACTCCAACGTCCACACATGCCGGCTTACCCGAACTTAAGTGCGATTCTTGCAATTCGCCCTATCTACGTAAGGGTACGGACTGGTTTTGTAACAGCTGTACAGGCTTTGGGCGTGTTCCTGCGCATGCACGCATGCAACCACGACAAGCCAAGccaaaagctgctgctgcgccaaACAATAGACGCAATGGCGTATCCTGTGCCAATTGCCAGACTAACACCACGACGCTGTGGCGGCGTAACAATGAGGGCAATCCTGTGTGCAACGCTTGCGGACTTTACTTTAAGCTGCACAATACAAATCGTCCAGCATCCATGAAGAAGGATGGCATACAGAAACGAAAGCGCAAACCAAAGAACAATGGCGGAGCCCCCATGCATCGTGCTCCCTTGCCAAGTATGCAGCAGGGCGTAAATTTAATGGTCAATAGCGGCACGATATATCCTTCCCAAATGTCAGTGGGATTGTTGAACAATAGCCAGCACAATGCAAGTCCCGAGCTGCATGATATGTCCACATcgaatgctgctgctgttgttgcagcttcGGGCTCATGTGTGGTGGCCATTGCCTTGAACCCTACAGCACCTTCTACTTCAGATACTGCGACAAGCAGTCTAAATATGTCGCGTCATCATGGCACTGGGGAAAATCATTTGCCCTTTAGTCAGCAAACCCCAGTGCAGAGCCAGTCGCCGCATTTGCCCAATTCGAGTACGCTGAACCGGCAGATTGTGCAATCGGTAACTCCCGTTGAAAACACCAACGGCCGAAGTTCGAATGGGGAACTCGCAACGAGCGTTATAACTCGCACTGGACTACCAGAGCGTGCATCGAATAACTAA
- Protein Sequence
- MEPQTTQQQQQQQQQQQQLQQLQQQVLSKQQLQLVDKIKSESNSNNAEPLTQQTPSGGTPTSALEEQQVQEQQQQQQSATTVGVVVQTTQSGIGETEEQHQHHQPQYVVIQRPQQRRILTTAGTLELNEPRDSDPGATVSSSTSISGSAVDAHGDYQRNQHSSPTHYVQLAPRSSEETPGTLYTSYPTGQIICTADDGAPIKIETIDKSEVSGDAQQLQHQQQQQQHQCPTPNSSYAESIVVTGNPQLQSHPHAHAMPHSTHGTVRFVSEDGARFTSSSADNDAPGTNLYYDASVIDATVHANESKTYADLGNAYAFPANATFATSNAYSATGNTIYSVPAANLNSLRQTTAGPYQTISFLESGTPNDPPLWSNAAEYQNVSYSNYHSQVIDEYQPSNMTPAHWTSAPNIGNYEATLAATTGTPTSTHAGLPELKCDSCNSPYLRKGTDWFCNSCTGFGRVPAHARMQPRQAKPKAAAAPNNRRNGVSCANCQTNTTTLWRRNNEGNPVCNACGLYFKLHNTNRPASMKKDGIQKRKRKPKNNGGAPMHRAPLPSMQQGVNLMVNSGTIYPSQMSVGLLNNSQHNASPELHDMSTSNAAAVVAASGSCVVAIALNPTAPSTSDTATSSLNMSRHHGTGENHLPFSQQTPVQSQSPHLPNSSTLNRQIVQSVTPVENTNGRSSNGELATSVITRTGLPERASNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00339562; iTF_00336381; iTF_00338801;
- 90% Identity
- -
- 80% Identity
- -