Ccau010968.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- dnajc2_1
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000146.1:4555144-4557258[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00087 0.79 10.0 0.0 4 31 427 458 425 462 0.86 2 2 1.4e-10 1.2e-07 31.8 0.1 2 41 567 610 566 614 0.90
Sequence Information
- Coding Sequence
- ATGACTAACAAAATAGAATTGGTGTGCACAACTATCAAGGTCGTGCGTTGCAAAGTTGAGCGCGTTGGCTTGGCCTATTACAATGCACGCCGCCAATTTACAGAACCAGGTGTTGAGCGTAGTGAATCAGATGAAAAGTTGACGGGCGCTGGCGAGGAAGTGGATATAGCTTATCTAAAGTCATTAGATCCCAAAGAGTGGAAGGATCAAGATCATTATAGTGTATTGGGTCTGGGAAAATTAAGATATGAAGCCAGCGATGATGATATACGTCGTGCGTATAGGCGCATTGTGCTACAGCATCATCCAGATAAGAGAAAAGCCAAGAACGAAGAAATTGTAACTGAGGATGATTATTTTACGTGCATAACAAAGGCTTACGAGATTTTAGGTACACCCAAAGCGAGGCGCTCCTACGACTCGATTGATCCCGAATTCGATGATGCGTTTCCCACACAAGCAGACATAGATACAGACTACTTCCCTTCCTTTAACAAGTATTTCGATTTGAATGCACGCTGGAGTGAAAAACCAAATGTGCCGCCTTTTGGCGACTTCAATGCCAAACGCGAGGAGGTTGAACGGTTCTACAACTTTTGGTATGACTTTAAATCTTGGCGTGAGTTTAGCTACCTAGACGAAGAGGATAAAGAAAAAGGTCAAGATCGCGATGAACGCCGCTggatagaaaaagaaaataaagccGCGCGAATTAAGCGAAAAAAGGAGGAAATGGCGCGCATACGTTCTTTAGTGGATTTAGCTTATAACAATGACAAGCGTatacaaaagtttaaacaGGAAGAGAAGGATCGCAAGGCTGCTGCGAAGCGTGCAAAGATGGATGCAGCACAGGCACAAAAGGCCGAACAAGAACGTGCCGTAAGAGAGGCTGCTCTGGCCAAGGAACGTGCCGATAAAGCGGAACAAAAACGGATTGAGCAAATACGCATAGAACGCGAGCAGCAAAAGAAGGTTCTGAAGAAGGAACGCAAAACACTGCGAGACAAAGTCAAGGACAGCAAATACTATGCCAAAAATGACAAGGACACGCTCAAGCATATGGAAGGCACGGAAAAGATATGCGAAACATTTAGTCTAGCCGAACTTCAGGCATTGAACAAAGCCATGGAAACCAAGGGCCGTGAAGCCTTTTGTGCTGCTTTACAAACAGCAGAGCAAAAAATTGCGGCCGAGCTGGAGGAGATCAATCAGGCGCACCAAAAGAAACTGGCCATAGCCAAGTCGGATGTGAAAGAGGTCAAAAAGAACGAAATCTGGAGCAATGAAAACGTGCAGTTGCTCATTAAGGCTGTCAATCTATTTCCAGCCGGAACAGCGCAACGCTGGGATGTCATAGCTACCTTTATCAATCAGCATAGCAGCGGTGGCGCTGGACTGGTTACCGCACGTGATGTACTCAACAAAGCCAAGGCCTTGCAGCACACCGATCATTCAAAGAGCACGTTAAAGAGCCAAGCCAATGATGGTGCATTCGAGAGTTTTGAAAAGTCGAAGAAAGAAGTGCAGACATCAAATGATATTACGCTAGGTGAGACATCTTCGGAGGTTAAAGAGAATGTCAAGCAAAATGGTGTGAACAAATTGGACAATCAGGCGCCCAAGCAAAATGGCATCGTAGTTTCACCACCAGCAGCGCCGCAGGTCAATGGCATCCAGACGCCAGCAGCTGCACCAAAAAGCTGGACCACGGAGGAGCAGGCATTGCTAGAACAGGCCATTAAAACttacccaacaacaacaccagaTCGCTGGGATTGCATTGCTGCTTGCATACCGAATCGCAGTAAAAAGGATTGTTTGCGGCGCGTCAAGGAACTGGTAGAACTTGTCAACTCAAAGAAAGAGGCACAGGCGGCggtgaaatga
- Protein Sequence
- MTNKIELVCTTIKVVRCKVERVGLAYYNARRQFTEPGVERSESDEKLTGAGEEVDIAYLKSLDPKEWKDQDHYSVLGLGKLRYEASDDDIRRAYRRIVLQHHPDKRKAKNEEIVTEDDYFTCITKAYEILGTPKARRSYDSIDPEFDDAFPTQADIDTDYFPSFNKYFDLNARWSEKPNVPPFGDFNAKREEVERFYNFWYDFKSWREFSYLDEEDKEKGQDRDERRWIEKENKAARIKRKKEEMARIRSLVDLAYNNDKRIQKFKQEEKDRKAAAKRAKMDAAQAQKAEQERAVREAALAKERADKAEQKRIEQIRIEREQQKKVLKKERKTLRDKVKDSKYYAKNDKDTLKHMEGTEKICETFSLAELQALNKAMETKGREAFCAALQTAEQKIAAELEEINQAHQKKLAIAKSDVKEVKKNEIWSNENVQLLIKAVNLFPAGTAQRWDVIATFINQHSSGGAGLVTARDVLNKAKALQHTDHSKSTLKSQANDGAFESFEKSKKEVQTSNDITLGETSSEVKENVKQNGVNKLDNQAPKQNGIVVSPPAAPQVNGIQTPAAAPKSWTTEEQALLEQAIKTYPTTTPDRWDCIAACIPNRSKKDCLRRVKELVELVNSKKEAQAAVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00804316;
- 90% Identity
- iTF_00339078; iTF_00337452; iTF_00338268; iTF_00335811;
- 80% Identity
- -