Ccau001850.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- -
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000032.1:4345440-4348000[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.2e-10 1.1e-07 32.0 0.0 1 44 233 277 233 279 0.96 2 5 0.00018 0.16 12.2 0.0 3 44 288 333 288 335 0.89 3 5 2e-06 0.0018 18.4 0.0 2 46 342 387 341 387 0.91 4 5 4.2e-11 3.9e-08 33.4 0.1 3 44 395 437 393 439 0.95 5 5 3e-12 2.7e-09 37.1 0.1 2 45 505 549 504 550 0.96
Sequence Information
- Coding Sequence
- atgGCAACTCAAACTCATCAACAGCTTGAGAATGTTATTCAGCAACAGATACTGGAAATCTCCGGCGCATTGGCGGCAGCAACTGGTGAGGCAAACGCCGCAAGCGCCTTATGTATCAaccagcagctgcagcggaACTTGGAGCGAGCTCGTGCTAATGTGCTAGATTTATTAGAAAAGTTGGGGGCGCGCTATGCGCGTAATAAGGAAATTCTGATGGCTCGTCAATCGCAGTCGCGCACCAAAAACTCAAAGGGTGAGACAATCTCAAAAACAGGCGCCTGGCTGTGCGGAGGTACCTTTAAATTCAAGGGAAATCTATATTTTCGCGATGCGTCTGGACGCAGTTGTCCTAATAATGATGACTATAAGCGACGGTCTTATACAGAAATGTTTCCAACAGATTTCGATATGCGTTCGAAACATGTGTGGACCATGTACGACAAGAAGAATGTTGTTATGGGCATCAAACAACAGTTGTTAGATTACGCCAACATTCAGCGACAATCACAATCGAAGTCCTGCAAAAGAAATGCCGTTGAACTGCATGAACAATCTCTGGCAAATTTGTTGACCTCGGCTGACAGCAGCTTTAGCATTGATTGGCATCAACTTAGCTCGGTAGAGATTCAAAGTCGCCATTCGCCTTACAGCTGCCAAGCTATGTGGGAAGTCTATTTGCATCCAAGACTAAAGCGCTGCCCTTGGACACCTCATGAGGATGAGATTTTGTTAACCATGGCTACaagcttaaattttcaaaattgggAAGCAATTGCCGAGGCAGTAGGTCATCGTTCGGATTATCAATGCTTTGTACGGTTTCAGACCACGGTACGTTATCAAGCCGCCCCGCTTTTCAAGTGGAGCAGAAGAGACGATGATCGCCTAAAGTCAGTTGTACTCAGAAACACCACAAATAGCGTTGTTGATTGGGGTAGTGTTATGCAGCATTTTCCAGGAAAATCCAAGTCAACCATAATTGGTCGTTACACTTATGTGCTTCATCCAAGAATTAGTCATGATTCCTTTACGGCGAAGGAGGACATGACTCTTTTTGCTGCAGTTGAAAAGTATGAtggaaaattttataactttccACGCAATCTGTTTCCCAATCGCTCATTAACTCAGTTGCGTACGCGCTACTATACTGTTTTGACACAGCGTGATAAGACTGATTCTTGGTCGATAGAGGatgacaaaaaattaatagaaTTTGTAACCATTCACGGCAAAACGCAGTGGGTTAACTGTGCCAGATATTTAGGAAATCATACACGCACAAGCTGCCGCACGAGATTTCTGACCATAACACGATTTATGGAACAAAACCCTGGATCAGATTTGCAAGATTTTCCTCGGCGTCGGAAAATGAAGGACACTCTGATTACAGAATTCAACTGGGCCCAATGTCTGGAGATTTGGAAGCAGGATCCAAGCACCTTGGAATTTGAAGCAGCATCCAAAAATTCTGCTCCCATCAAAAAACCGCGTGCAGTAGAGTCTTCAGAGCCATGGAGCGTGGAGGACGACACAAAGCTATTGGAATTTGTAACTAATCATGACACTTCCCAATGGGCTAAGTGCTCTTTATATATAGGAAATAAAACAGATAAAAGTTGTCGGGCAAGATATATGACCATCAAACGATTTCTTGAAAAGAATCCCAATGGACAAGTCGAAGAATTTCCAAGACgcaaaagtattaaaataagTAAGCAAGCCTATGAATACTTTAAATATTCATACAATTTCCAATGGGACCAAAGGGATACCAAAGAAGTTCCTATTCCCAGCGGCGATTCAAATCTGCGTTTGGTCATTCAGGCTTTGAGACCCCAAGTACCTGCCAATTTGGAAAACTTAGTTGCAAGCCCTGTGCTGTCGCTCGACCTGTGCAAAGTTTAcagcaaaatgttaaaaacacTGCTTCCAGTTGACCTCAATAGCGATTGCGAacggcagctgctgccaccCAATTGGTCCACTATGATGGGCTTCCGCGCCCTATGCATCTTACCTGCGGATTTTCGCAATTCACCACAACAGAAGCTAGATTATGATACATCAGTGGATGCAGTGCAGCTATTTCGTCAGCGTTTGCGTGCTTTGTTCTATCGCACCACCTTGTTGAGTCGCTTGGAACCGGACTCTACTGAGAACTTGCGAACCGCTTTGCCACCGCTTAAAACACCTTCTGAAAACTATGTACTTTCTGATGTCGCGCCGTCTGAGACCGACGACGAAGAGAGAGCGATTAAAAATCTGAAAGATAATTTGGCGTTAAAGCAATTAGAACTGGTGAATCGCCTGTGtgatgaaaaagaaaaagcaaaaccagAACACGAAAATGAAGATGATGTTGGGTCTGATGTTAAGAAGGAACAGTTTTAG
- Protein Sequence
- MATQTHQQLENVIQQQILEISGALAAATGEANAASALCINQQLQRNLERARANVLDLLEKLGARYARNKEILMARQSQSRTKNSKGETISKTGAWLCGGTFKFKGNLYFRDASGRSCPNNDDYKRRSYTEMFPTDFDMRSKHVWTMYDKKNVVMGIKQQLLDYANIQRQSQSKSCKRNAVELHEQSLANLLTSADSSFSIDWHQLSSVEIQSRHSPYSCQAMWEVYLHPRLKRCPWTPHEDEILLTMATSLNFQNWEAIAEAVGHRSDYQCFVRFQTTVRYQAAPLFKWSRRDDDRLKSVVLRNTTNSVVDWGSVMQHFPGKSKSTIIGRYTYVLHPRISHDSFTAKEDMTLFAAVEKYDGKFYNFPRNLFPNRSLTQLRTRYYTVLTQRDKTDSWSIEDDKKLIEFVTIHGKTQWVNCARYLGNHTRTSCRTRFLTITRFMEQNPGSDLQDFPRRRKMKDTLITEFNWAQCLEIWKQDPSTLEFEAASKNSAPIKKPRAVESSEPWSVEDDTKLLEFVTNHDTSQWAKCSLYIGNKTDKSCRARYMTIKRFLEKNPNGQVEEFPRRKSIKISKQAYEYFKYSYNFQWDQRDTKEVPIPSGDSNLRLVIQALRPQVPANLENLVASPVLSLDLCKVYSKMLKTLLPVDLNSDCERQLLPPNWSTMMGFRALCILPADFRNSPQQKLDYDTSVDAVQLFRQRLRALFYRTTLLSRLEPDSTENLRTALPPLKTPSENYVLSDVAPSETDDEERAIKNLKDNLALKQLELVNRLCDEKEKAKPEHENEDDVGSDVKKEQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -