Ccau002477.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- Myb
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000040.1:362674-364798[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1e-14 5.5e-11 42.5 0.6 2 46 121 165 120 165 0.96 2 3 2.7e-18 2.4e-15 56.4 0.6 3 46 173 217 171 217 0.98 3 3 1.5e-15 1.3e-12 47.7 0.2 4 45 226 267 224 268 0.98
Sequence Information
- Coding Sequence
- ATGGACACAGGCAAGCCAAATTACTATTTGAAGGAATTTTCGGACTCTATGGGTGACGACTCAGTCTTGGTATACTCAGATGAGACTCAGACTCAGAATGAGAGTCTACTTGCAGATAAACGGAGCGGCTCTTGCGCGCAAAGTACTAGCACACCCCCAGGCGAAAAGGACTCTGAGGGTTTAGTTCCCCTGAGCACCAGCGTTAATCCTGGCCATTTGTTTCCAGATAATTTAAAACGTGAACCAAAAACAGTGGATGACTCGGCAGCAATAAGTCACACCTGCACAACTGTCGAAACTGAGAAATCTAGATTACATGACATTCAACATAAACCTCAAGCGTATAATCGTAAATATGTTAAACGTTGGTCCGAATCCGAGGATGATTTGCTTAAGTCGCTTGTGAAAGAACACGGTAATTGCTGGAAAATTATTACGTCGCATTTTAAGGATCGCATTCTGCCGCAAGTGAAATATCGTTGGACCCAAGTTTTAAATCCTCAAATCAGCAATGCCCCCTGGTCACGTGAAGAGGATGAAAAACTTATAGATCTGGTAGCTCGCTTTGGACCCAAAAATTGGACGCTTATTGCGCAATTCATAAATAGACGTATTGCCAATAAATGCAGAGAACGCTGGAATAATCATCTAAATCCCAATATGAAGAAGTTTTATTGGACCGAGGAAGAGAAGAAAATCGTATATTCCGCACACACAAAGATTGGAAATAAGTGGACCAAAATAGCTACACTGCTGCCGGGACGCTCACCTAAAGCCATTGAAAATTACTGTCGAAAATACCATGCCAATGGTCGTGCTTTTGCAAAACCTGTGTATTCAAAGAATACGAACCTAATAATTGAGGCCGGTGGCGTTGGCAAGACTTTAACCAATTCCTTTATCAATAAAACAGTGCTAAACGGCAGTAGCAACTTCAATAGTATTGCAAACACAGCACAGCCATCAGTTactatattaaaattaagacCAAATTCGGGTTCAGCAGAAATAGCTCCCGaccattcaaaaataaacgATACAAAAGTTGTCGAAGCAGCAATTTTTTCTGCTGCAAACAAGCAGCTACCACCACTGTCTAAGATGCAACATAGAGATGTTAGTATAACGCGACCGCTGCCAACaatattgaaatgtttaaGACAAAATAGTGACAGCGttcttaaacaaaaatcacCAAAATCGGCGGTGAAGAGTCAATTCTTAAAATCGCCCTACTTAACCACATTCGAGAACATGAATTTTAGAGCCAGCACCCGAGTAGTTACAACTTGCAATCGTAAGGAGTTAGAGACCTACTCAAATGAAACTCCACATAAGAGTTTGATTGTACCGCCCACACCCCTTAAAATTGCTTCGTCCGTTCTTGGTCAAAACCGCGCTGGACGTCGCTCTATTCCATTCAACCCAGCTAAAATAATGCATTTGGAACAAGTTAAGAGTACTCCCAATAATAGCAACGATTCTTACGATCATTGTAACGCAAGTGCAAGCGTAGAGTCGGCGCTGCTCAAACGTGCGCATAAGTCGGTGCTTACCAGTTGCAGCGCTAATATGATGCTATCATATAAACCAGAAGCCATTGAAACGAAAACACCCAGCAAACTTACCAATTCTCCGAGTAATAGTATTATGAAGAATACTTTGTGCAGCGAACATGATATACTTTTTGATAAGGGTAAAAAAGAGTATAGCCAACATCAAAACCAAAGCAACCTTGGTGGATTTGTGCCGATCTATAATAATCGCATCGATCCAAAATGGGCACGTATTGCCTTTGGTAAAACAGAAGCCCAACGTATTATGGAGCAGCAAGCGTATGAATTTCTTAAGATGCTTGCTGTGACGCCACGCTCGCTTAATGTCGAGGAGTAG
- Protein Sequence
- MDTGKPNYYLKEFSDSMGDDSVLVYSDETQTQNESLLADKRSGSCAQSTSTPPGEKDSEGLVPLSTSVNPGHLFPDNLKREPKTVDDSAAISHTCTTVETEKSRLHDIQHKPQAYNRKYVKRWSESEDDLLKSLVKEHGNCWKIITSHFKDRILPQVKYRWTQVLNPQISNAPWSREEDEKLIDLVARFGPKNWTLIAQFINRRIANKCRERWNNHLNPNMKKFYWTEEEKKIVYSAHTKIGNKWTKIATLLPGRSPKAIENYCRKYHANGRAFAKPVYSKNTNLIIEAGGVGKTLTNSFINKTVLNGSSNFNSIANTAQPSVTILKLRPNSGSAEIAPDHSKINDTKVVEAAIFSAANKQLPPLSKMQHRDVSITRPLPTILKCLRQNSDSVLKQKSPKSAVKSQFLKSPYLTTFENMNFRASTRVVTTCNRKELETYSNETPHKSLIVPPTPLKIASSVLGQNRAGRRSIPFNPAKIMHLEQVKSTPNNSNDSYDHCNASASVESALLKRAHKSVLTSCSANMMLSYKPEAIETKTPSKLTNSPSNSIMKNTLCSEHDILFDKGKKEYSQHQNQSNLGGFVPIYNNRIDPKWARIAFGKTEAQRIMEQQAYEFLKMLAVTPRSLNVEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -