Ccau003186.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000045.1:3136630-3156543[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-11 4.4e-08 32.8 0.0 1 35 400 435 400 439 0.92 2 2 1.1e-18 2e-15 56.3 0.0 1 43 886 929 886 931 0.95
Sequence Information
- Coding Sequence
- ATGCCTAGCAATTCAAGTGCCACATGCCGCCGAAGTCGTCCACGTCCAGAGCCCACACCAGAGCCCACACCAGCGCCTCCAAGCTCACATCTCGACTTGGCCACAATACTATTCTTGGCCATGTTTTGCATGAAATTGCATAACAAAAGTCTAGAACGCGTCGCTGAGGAATTCATGGGTCGCAGGAAATGGAAGCATTATCAAGAGCAACTGACGCGCACCCAATTGAATATTGCAACAATCATAGAAGACACAGAAGCAACAGGCAACAaatacagcaacagcagcaacaaccactgcaagcaacaacaaacagaagaagaagaagaacgacAAGACCACCGTTTAATACAAAAGCAGTCAATAGAAAGCGGGCAACATTGCAACAACGCCTTGGaatttgaaagagattttgACAACAACCATAGCACATCACTAACTGATCCAACATCACGTACACCATCACCACCGCTTGAACCCAACGATTGGACACCGTCTGATAAGTGTAATTTCTGTGTTAACGGTCGCTTGCTAACGGTCAACGCCCAAGGTGAATTAGTGGCCGAAACAACAAacgccgcaacaacaacagccaccaCATATACCAATAACAACTATTGCCACAACGGTGCCGCACAATCAGTGCTGCAGCTGGACAGTGACAGCAACTCAAGCGCATCGCTGTACAActataacagcaacaacaacaacactaagcACACAGTGCGTACAGCAAAACGCAACATAACGgcccacaacagcagcaacaacgcagcgactgcgacgtcaaagtcaacgtcagcgtcggcgtcggcgtcgtctTCTATAGAACTCTATAAGCTGCTCACACAAGAAGCAGCTACAATGACATCCATGGACTCAATGGCCGCACAGTTGGCTGCAATTAAGACCATAACGGAATTTCAGTCTAatTTCAACTTGATCAGTTCGCTGGCcaatcaacaacagcaacagcaacaacaacaacagcatacTAACTCGGTACCACCAACTACCTCAGAAGTATCTGCCGCCGCAATAAGTCCAACACTCAAAGATACGCCCAGTCCCAGTGCAGATGCACCATTAGATCTTAGTTCCAAACCATCACCAAATTCATCGATTAGCGGTGATCTAAAGTCTGGCAGGACAATATCAGAGTGTGCCACGCCCATACCCGCAGCACGGCGCAGCTACAGCGAGGACGATCTGCAGAGCGCTGTACAAGATGTGCTGGACCACAAGGTGGGCACACGCAAAGCGGCCAGCCAATACAATGTGCCGCGCTCCACGTTGCGCAACAAGCTGCACAAGATTCAAGCCAATCGCGGCATTGAGCTATCACACGATTTGGATCTGGATCAGGATGACTCGGCCGATGAGTGTGATGACAGCAATGCTTCAACGCCCGTATACTCAGACTTGGCGCAGCGCATTGTGTCCAGCGCGCAGCTGCGCAAGCTAAGCGGTCTGTCCGAGAATAATGGCAGCGAGATGGGCGAGGAACTGGAGCACAGACATAGCGGCGCATCACCTGGACTACGCGCACAAAGTGGCACACCTCTGGCCGGTAGCagtgcagcagcaggcagTAACGCTGCCGCCGGCACAGCTGGTGAGCTGCCCATGCCCATTGATCCCAGTATGCTGCTGCGCACGCTTGTGCTGGCCGCCGGCATTGGAGTCATGCCCAAGCTGGATGAGAAACAGACGCTGGGTGAGCTATTCAAGACGTTGCTGGTGGCCAGCAGTGGCAACTCGTTTATTAACGAGGCCTTTACCAATGCGGCAGTTGCCAATGCGGCAGTTGCCAATGCTGCAGCGGATACGAATATGCTGCAAAATGGCACGGCAGGCATTTATGATCAGCATATGCTGTTGCAGCAgttccagcagcagcaacaacatcagcagcaacatcaccagcagcatcagcaaacgcaacaacagcagctgagTGTTAATAGCTATAGGCATCGTCTACCAAAGTCTGATACACCGGAGACCAACTCCTCGCTGGACACTAACGAGGCCTGTGATGATCCCATACTGAAGATTCCGTCCTTCAAGGTTAGCGGCGCCTCAAGTGTTTCACCCTCGCTCTCGAGCTGcctcaacaacaataataacaacaacaatacaaacagcaactgcagcagcaatcGCAATGGCGGCGGTGGCGACCAGAGTCCGCATTCCGCTTCACCCATGCTGGCCGCTGCCGTGGGCTGCAGCTACCGCCCAAATAGCAGCCTGCTCTCCTCTTCGCCTACggctatacaaaaaatgatgGCCAATACCATACACCGCAAGCTCAATGAGCAGAGCAGTCAGGAGGCGGCCATGTTGGGACTCAGCCTGGAAGCCTGCAGCAAgcgcaacaatggcaacaccAGCGGCAGCGagtgcagcagcggcggcggcattGGCGTCAacgccaacagcagcagcagcagcagctacaaaaagcCCAGCATTAGCGTAGCCAAGGTCGTAGGCGGCGCGGATACCTCACGTTTTGGCGCCTCACCCAATCTGCTGGCACAGCAGCATCACCTGCCCCCGCATCATGCGCATCAATTGAGCGCTCAGGATGCGGCCGCTCTGGCTGCCGGCAAGGGCACACGTCCTAAACGCGGCAAATATCGCAACTATGATCGAGATAGTCTGGTGGAGGCCGTCAAGGCGGTGCAGCGTGGCGAGATGAGTGTGCATCGTGCGGGCAGCTACTATGGCGTGCCGCACTCCACGCTGGAATACAAAGTGAAGGAGCGCCATTTGATGCGTCCACGCAAACGTGAGCCAAAGCCACAGCCGGATTTGGTGGGTCTGACGGGTGCggccaataaaataaatccCGCAAATTTGGTGGCAAGCAATCATCTGGACAAGCTTAAGGCTGCCAGCGGCAGCAATGCCAACTCAAAGCTGAGCAATGCGCTTAAAAACAATAGTCAAGCTGTGGGCGTGGTGGGTGCGGCCGGCGTGCCACCCAATGGCATGAAGCTGAACATGTTTGAGCCCGCCGGTCAGCTGCCCTTTCAGCAGAACATGTTTTGGCCAACGCCGGCGTTGTTCGACGCCATGCGCCTAAATGCGGGCAACCCGAATGCGGTGACCAATGCCAGCGCCCAGCTCAGTCAGCAGCATGCACATGGTGGACATGGTGGCATGCCGCACAAGGGCGCGCTGGAGTTCCAAGAGAGCGTTTACGATAATATCATACGCAAGAAGCTGCAGAGCGGagatggcaatggcaatgcgCTGCTGGATCAGCTGCTGGTCAAGAAGACGCCGCTGCCGTTTACCAATAATCGCAGCAATGAATATGCGGCGCCAGCCTGCTCCACAGCCGAGGCGTCACTACTAGGCGCCAAGCGTTTGGGCAGCCCTATGGAAGCCTATGCGGATATCAAGCGAGAACGTCTAAGTCCAGAGAGcgctgccagcagcagcagcgacgagGAGCATGCGgccagcaataacaacaacaacaacaacaacagcgagtccgcgcacaacaaaaacaacagtaagtgcaacaatggcggcagcagcaacaacaacaacggacGCAGTCGCATGACGTCACGCGACTCCGAAACCGATGCCAGCAGCTTAAAGAGCGAGCACTCTGCGCTCAGCATGGCTGCCgctcacaacaacaaaatgatgGATCTcaatggcggcagcagcagcagcaagcatCAAGCACATGAGCTTTCTATGGAAGCCTCGCCCAGTTCATCCATATTACATGAGAAGCTGGCGCAGATCAAGGCCGAGCAGGAATGTCCGAGTGCAGCCGAAGAGCACTTATAG
- Protein Sequence
- MPSNSSATCRRSRPRPEPTPEPTPAPPSSHLDLATILFLAMFCMKLHNKSLERVAEEFMGRRKWKHYQEQLTRTQLNIATIIEDTEATGNKYSNSSNNHCKQQQTEEEEERQDHRLIQKQSIESGQHCNNALEFERDFDNNHSTSLTDPTSRTPSPPLEPNDWTPSDKCNFCVNGRLLTVNAQGELVAETTNAATTTATTYTNNNYCHNGAAQSVLQLDSDSNSSASLYNYNSNNNNTKHTVRTAKRNITAHNSSNNAATATSKSTSASASASSSIELYKLLTQEAATMTSMDSMAAQLAAIKTITEFQSNFNLISSLANQQQQQQQQQQHTNSVPPTTSEVSAAAISPTLKDTPSPSADAPLDLSSKPSPNSSISGDLKSGRTISECATPIPAARRSYSEDDLQSAVQDVLDHKVGTRKAASQYNVPRSTLRNKLHKIQANRGIELSHDLDLDQDDSADECDDSNASTPVYSDLAQRIVSSAQLRKLSGLSENNGSEMGEELEHRHSGASPGLRAQSGTPLAGSSAAAGSNAAAGTAGELPMPIDPSMLLRTLVLAAGIGVMPKLDEKQTLGELFKTLLVASSGNSFINEAFTNAAVANAAVANAAADTNMLQNGTAGIYDQHMLLQQFQQQQQHQQQHHQQHQQTQQQQLSVNSYRHRLPKSDTPETNSSLDTNEACDDPILKIPSFKVSGASSVSPSLSSCLNNNNNNNNTNSNCSSNRNGGGGDQSPHSASPMLAAAVGCSYRPNSSLLSSSPTAIQKMMANTIHRKLNEQSSQEAAMLGLSLEACSKRNNGNTSGSECSSGGGIGVNANSSSSSSYKKPSISVAKVVGGADTSRFGASPNLLAQQHHLPPHHAHQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKINPANLVASNHLDKLKAASGSNANSKLSNALKNNSQAVGVVGAAGVPPNGMKLNMFEPAGQLPFQQNMFWPTPALFDAMRLNAGNPNAVTNASAQLSQQHAHGGHGGMPHKGALEFQESVYDNIIRKKLQSGDGNGNALLDQLLVKKTPLPFTNNRSNEYAAPACSTAEASLLGAKRLGSPMEAYADIKRERLSPESAASSSSDEEHAASNNNNNNNNSESAHNKNNSKCNNGGSSNNNNGRSRMTSRDSETDASSLKSEHSALSMAAAHNNKMMDLNGGSSSSKHQAHELSMEASPSSSILHEKLAQIKAEQECPSAAEEHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -